RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 TRIP6Q15654 476 aaKnown RBP10.84□□□□□ -0.67
CIITA-212ENST00000618207 ANKRD39Q53RE8 183 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 OR1F12Q8NHA8 337 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 OR10A2Q9H208 303 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 SLC7A10Q9NS82 523 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 ZNF581Q9P0T4 197 aa10.84□□□□□ -0.67
CIITA-212ENST00000618207 SNRPGP15A8MWD9 76 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 HTR3BO95264 441 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 CPN1P15169 458 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 MGMTP16455 207 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 BLVRBP30043 206 aaPredicted RBP10.83□□□□□ -0.68
CIITA-212ENST00000618207 MTCP1P56278 107 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 ECH1Q13011 328 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 BAMBIQ13145 260 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 BRICD5Q6PL45 260 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 TEX261Q6UWH6 196 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 TMEM251Q8N6I4 163 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 ZNF680Q8NEM1 530 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 DEFB124Q8NES8 71 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 CPNE4Q96A23 557 aaPredicted RBP10.83□□□□□ -0.68
CIITA-212ENST00000618207 PTX4Q96A99 478 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 GPR87Q9BY21 358 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 GPR35Q9HC97 309 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 ABI3Q9P2A4 366 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 ZNF175Q9Y473 711 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 CSAG2Q9Y5P2 127 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 U3KQ87 197 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 OR6C65A6NJZ3 312 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 DISC1C4P0D8 188 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 RGS11O94810 467 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 ZNF806P0C7X5 589 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 CCL1P22362 96 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 SCRN3Q0VDG4 424 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 SEZ6L2Q6UXD5 910 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 OR4K15Q8NH41 348 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 MARVELD3Q96A59 401 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 LOXL4Q96JB6 756 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 GPR137Q96N19 417 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 CLEC4MQ9H2X3 399 aaPredicted RBP10.83□□□□□ -0.68
CIITA-212ENST00000618207 NPTNQ9Y639 398 aa10.83□□□□□ -0.68
CIITA-212ENST00000618207 A0A0A6YYH2 397 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 A6NJ64 397 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 OR2AT4A6NND4 320 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 C21orf140B9A014 251 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 SYNGR3O43761 229 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 HLA-HP01893 362 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 HIST1H1DP16402 221 aaKnown RBP10.82□□□□□ -0.68
CIITA-212ENST00000618207 CXCL2P19875 107 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 SSTP61278 116 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 SORDQ00796 357 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 DHRS2Q13268 280 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 ZBTB37Q5TC79 503 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 CRIP3Q6Q6R5 217 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 KCTD9Q7L273 389 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.82□□□□□ -0.68
CIITA-212ENST00000618207 CDH26Q8IXH8 852 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 ADAD2Q8NCV1 583 aaKnown RBP10.82□□□□□ -0.68
CIITA-212ENST00000618207 SEMA6DQ8NFY4 1073 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 MARCH1Q8TCQ1 289 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 CST11Q9H112 138 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 SLCO5A1Q9H2Y9 848 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 OR51B6Q9H340 312 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 C12orf49Q9H741 205 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 ZNF701Q9NV72 531 aaPredicted RBP10.82□□□□□ -0.68
CIITA-212ENST00000618207 PRR13Q9NZ81 148 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 UPB1Q9UBR1 384 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 B4GALT7Q9UBV7 327 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 OR14I1A6ND48 311 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 F5H5P2 479 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 L7N2F9 121 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 TOR1AO14656 332 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 CTSSP25774 331 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 OTX1P32242 354 aaPredicted RBP10.82□□□□□ -0.68
CIITA-212ENST00000618207 NPY4RP50391 375 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 LHX2P50458 406 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 ATXN7L3Q14CW9 347 aaPredicted RBP10.82□□□□□ -0.68
CIITA-212ENST00000618207 RAB35Q15286 201 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 ABLIM2Q6H8Q1 611 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 C6orf201Q7Z4U5 140 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 C12orf45Q8N5I9 185 aaPredicted RBP10.82□□□□□ -0.68
CIITA-212ENST00000618207 SPICQ8N5J4 248 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 MRGPRFQ96AM1 343 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 URM1Q9BTM9 101 aaKnown RBP10.82□□□□□ -0.68
CIITA-212ENST00000618207 HEXA-AS1Q9H8Q6 139 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 OPN4Q9UHM6 478 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 LIPGQ9Y5X9 500 aa10.82□□□□□ -0.68
CIITA-212ENST00000618207 SPENQ96T58 3664 aaKnown RBP10.82□□□□□ -0.68
CIITA-212ENST00000618207 A0A0U1RQV5 110 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 M0R233 179 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 ZNF205O95201 554 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 TPOP07202 933 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 GIPP09681 153 aaPredicted RBP10.81□□□□□ -0.68
CIITA-212ENST00000618207 MEOX1P50221 254 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 ZNF92Q03936 586 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 SSBP1Q04837 148 aaKnown RBP10.81□□□□□ -0.68
CIITA-212ENST00000618207 PPP1R1AQ13522 171 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 EXOSC2Q13868 293 aaKnown RBP10.81□□□□□ -0.68
CIITA-212ENST00000618207 MICBQ29980 383 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 PABPC1L2AQ5JQF8 200 aa10.81□□□□□ -0.68
CIITA-212ENST00000618207 FOXL2NBQ6ZUU3 175 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms