RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 CYB5AP00167 134 aa12.78□□□□□ -0.36
SHROOM1-208ENST00000617339 UMODP07911 640 aa12.78□□□□□ -0.36
SHROOM1-208ENST00000617339 HCKP08631 526 aa12.78□□□□□ -0.36
SHROOM1-208ENST00000617339 SFTA3P0C7M3 94 aa12.78□□□□□ -0.36
SHROOM1-208ENST00000617339 CXADRP78310 365 aa12.78□□□□□ -0.36
SHROOM1-208ENST00000617339 PPP1R1AQ13522 171 aa12.78□□□□□ -0.36
SHROOM1-208ENST00000617339 OR52W1Q6IF63 320 aa12.78□□□□□ -0.36
SHROOM1-208ENST00000617339 ADAM5Q6NVV9 412 aa12.78□□□□□ -0.36
SHROOM1-208ENST00000617339 WDR5BQ86VZ2 330 aa12.78□□□□□ -0.36
SHROOM1-208ENST00000617339 GVQW1Q8N7I0 195 aa12.78□□□□□ -0.36
SHROOM1-208ENST00000617339 ASB10Q8WXI3 467 aa12.78□□□□□ -0.36
SHROOM1-208ENST00000617339 RHOFQ9HBH0 211 aa12.78□□□□□ -0.36
SHROOM1-208ENST00000617339 SH3BGRL2Q9UJC5 107 aa12.78□□□□□ -0.36
SHROOM1-208ENST00000617339 M0R036 132 aa12.78□□□□□ -0.36
SHROOM1-208ENST00000617339 SERPINA5P05154 406 aa12.78□□□□□ -0.36
SHROOM1-208ENST00000617339 DAP3P51398 398 aaKnown RBP12.78□□□□□ -0.36
SHROOM1-208ENST00000617339 IL13RA1P78552 427 aa12.78□□□□□ -0.36
SHROOM1-208ENST00000617339 PLPPR5Q32ZL2 321 aa12.78□□□□□ -0.36
SHROOM1-208ENST00000617339 EMC4Q5J8M3 183 aa12.78□□□□□ -0.36
SHROOM1-208ENST00000617339 ZNF585AQ6P3V2 769 aa12.78□□□□□ -0.36
SHROOM1-208ENST00000617339 C15orf40Q8WUR7 153 aa12.78□□□□□ -0.36
SHROOM1-208ENST00000617339 PAPOLGQ9BWT3 736 aaKnown RBP12.78□□□□□ -0.36
SHROOM1-208ENST00000617339 PRO3102Q9H379 93 aa12.78□□□□□ -0.36
SHROOM1-208ENST00000617339 A0A1W2PQD3 144 aa12.77□□□□□ -0.36
SHROOM1-208ENST00000617339 COLCA2A8K830 154 aa12.77□□□□□ -0.36
SHROOM1-208ENST00000617339 ZNF736B4DX44 427 aaPredicted RBP12.77□□□□□ -0.36
SHROOM1-208ENST00000617339 TPT1P13693 172 aaKnown RBP12.77□□□□□ -0.36
SHROOM1-208ENST00000617339 HTR2CP28335 458 aa12.77□□□□□ -0.36
SHROOM1-208ENST00000617339 FAM76BQ5HYJ3 339 aa12.77□□□□□ -0.36
SHROOM1-208ENST00000617339 NUDCD2Q8WVJ2 157 aa12.77□□□□□ -0.36
SHROOM1-208ENST00000617339 FOXRED1Q96CU9 486 aaPredicted RBP12.77□□□□□ -0.36
SHROOM1-208ENST00000617339 TMEM41AQ96HV5 264 aa12.77□□□□□ -0.36
SHROOM1-208ENST00000617339 CST11Q9H112 138 aa12.77□□□□□ -0.36
SHROOM1-208ENST00000617339 LRFN1Q9P244 771 aa12.77□□□□□ -0.36
SHROOM1-208ENST00000617339 ETV7Q9Y603 341 aa12.77□□□□□ -0.36
SHROOM1-208ENST00000617339 OR5H15A6NDH6 313 aa12.77□□□□□ -0.36
SHROOM1-208ENST00000617339 MT-CO3P00414 261 aa12.77□□□□□ -0.36
SHROOM1-208ENST00000617339 WIPI1Q5MNZ9 446 aaPredicted RBP12.77□□□□□ -0.36
SHROOM1-208ENST00000617339 ATP1A1-AS1Q5TC04 95 aa12.77□□□□□ -0.36
SHROOM1-208ENST00000617339 ANKRD16Q6P6B7 361 aa12.77□□□□□ -0.36
SHROOM1-208ENST00000617339 TMPRSS7Q7RTY8 843 aa12.77□□□□□ -0.36
SHROOM1-208ENST00000617339 OR4D6Q8NGJ1 314 aa12.77□□□□□ -0.36
SHROOM1-208ENST00000617339 RNF128Q8TEB7 428 aa12.77□□□□□ -0.36
SHROOM1-208ENST00000617339 AKR1E2Q96JD6 320 aa12.77□□□□□ -0.36
SHROOM1-208ENST00000617339 CCNL2Q96S94 520 aaPredicted RBP12.77□□□□□ -0.36
SHROOM1-208ENST00000617339 A0A1B0GV50 99 aa12.77□□□□□ -0.37
SHROOM1-208ENST00000617339 FBXO24O75426 580 aa12.77□□□□□ -0.37
SHROOM1-208ENST00000617339 ITGB2P05107 769 aa12.77□□□□□ -0.37
SHROOM1-208ENST00000617339 ZNF44P15621 663 aa12.77□□□□□ -0.37
SHROOM1-208ENST00000617339 S100PP25815 95 aa12.77□□□□□ -0.37
SHROOM1-208ENST00000617339 CYB561P49447 251 aa12.77□□□□□ -0.37
SHROOM1-208ENST00000617339 TAS2R19P59542 299 aa12.77□□□□□ -0.37
SHROOM1-208ENST00000617339 RNF141Q8WVD5 230 aa12.77□□□□□ -0.37
SHROOM1-208ENST00000617339 ADAT3Q96EY9 351 aaPredicted RBP12.77□□□□□ -0.37
SHROOM1-208ENST00000617339 NRIP2Q9BQI9 281 aa12.77□□□□□ -0.37
SHROOM1-208ENST00000617339 HES7Q9BYE0 225 aa12.77□□□□□ -0.37
SHROOM1-208ENST00000617339 GDF2Q9UK05 429 aaPredicted RBP12.77□□□□□ -0.37
SHROOM1-208ENST00000617339 TXNDC12O95881 172 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 S100A8P05109 93 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 ZNF20P17024 532 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 SNU13P55769 128 aaKnown RBP12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 EGR3Q06889 387 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 PGAP1Q75T13 922 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 MISPQ8IVT2 679 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 BAP18Q8IXM2 172 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 ST8SIA1Q92185 356 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 MCHR2Q969V1 340 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 ALKBH3Q96Q83 286 aaPredicted RBP12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 VSIG4Q9Y279 399 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 ABCA4P78363 2273 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 MPIG6BO95866 241 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 IGHG1P01857 330 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 RFPL3SP0C7P2 107 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 ASPHD2Q6ICH7 369 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 GALNTL5Q7Z4T8 443 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 BHLHE23Q8NDY6 225 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 OR2M3Q8NG83 312 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 MFSD8Q8NHS3 518 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 OR51M1Q9H341 326 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 NOSIPQ9Y314 301 aaKnown RBP12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 MED13LQ71F56 2210 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 A0A1W2PPH5 198 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 CLN5O75503 358 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 KLF7O75840 302 aaPredicted RBP12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 ZNF205O95201 554 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 ECH1Q13011 328 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 TSC22D1Q15714 1073 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 AWAT2Q6E213 333 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 RHOVQ96L33 236 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 DEFB127Q9H1M4 99 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 GPR84Q9NQS5 396 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 PLEK2Q9NYT0 353 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 NXT1Q9UKK6 140 aaKnown RBP12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 PCDHGA1Q9Y5H4 931 aa12.76□□□□□ -0.37
SHROOM1-208ENST00000617339 MED6O75586 246 aa12.75□□□□□ -0.37
SHROOM1-208ENST00000617339 PCOLCEQ15113 449 aa12.75□□□□□ -0.37
SHROOM1-208ENST00000617339 PDCD1Q15116 288 aa12.75□□□□□ -0.37
SHROOM1-208ENST00000617339 P4HA3Q7Z4N8 544 aa12.75□□□□□ -0.37
SHROOM1-208ENST00000617339 ANGPTL5Q86XS5 388 aa12.75□□□□□ -0.37
SHROOM1-208ENST00000617339 MAML2Q8IZL2 1156 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms