RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	KIR3DP1	A8MWS1	328 aa		12.2	□□□□□ -0.46
CACNA1C-231	ENST00000616390	ZIC3	O60481	467 aa		12.2	□□□□□ -0.46
CACNA1C-231	ENST00000616390	OPN1MW	P04001	364 aa		12.2	□□□□□ -0.46
CACNA1C-231	ENST00000616390	OPN1MW2	P0DN77	364 aa		12.2	□□□□□ -0.46
CACNA1C-231	ENST00000616390	OPN1MW3	P0DN78	364 aa		12.2	□□□□□ -0.46
CACNA1C-231	ENST00000616390	FGF5	P12034	268 aa		12.2	□□□□□ -0.46
CACNA1C-231	ENST00000616390	FCGR2A	P12318	317 aa		12.2	□□□□□ -0.46
CACNA1C-231	ENST00000616390	MSR1	P21757	451 aa		12.2	□□□□□ -0.46
CACNA1C-231	ENST00000616390	IL11RA	Q14626	422 aa		12.2	□□□□□ -0.46
CACNA1C-231	ENST00000616390	MPPED2	Q15777	294 aa		12.2	□□□□□ -0.46
CACNA1C-231	ENST00000616390	SLC25A42	Q86VD7	318 aa		12.2	□□□□□ -0.46
CACNA1C-231	ENST00000616390	OR2AE1	Q8NHA4	323 aa		12.2	□□□□□ -0.46
CACNA1C-231	ENST00000616390	KCNG3	Q8TAE7	436 aa		12.2	□□□□□ -0.46
CACNA1C-231	ENST00000616390	PHB2	Q99623	299 aa		12.2	□□□□□ -0.46
CACNA1C-231	ENST00000616390	EDEM2	Q9BV94	578 aa		12.2	□□□□□ -0.46
CACNA1C-231	ENST00000616390	ZNF471	Q9BX82	626 aa	Predicted RBP	12.2	□□□□□ -0.46
CACNA1C-231	ENST00000616390	WDR13	Q9H1Z4	485 aa		12.2	□□□□□ -0.46
CACNA1C-231	ENST00000616390	PROK2	Q9HC23	129 aa		12.2	□□□□□ -0.46
CACNA1C-231	ENST00000616390	B3GALT1	Q9Y5Z6	326 aa		12.2	□□□□□ -0.46
CACNA1C-231	ENST00000616390	FREM1	Q5H8C1	2179 aa		12.2	□□□□□ -0.46
CACNA1C-231	ENST00000616390		A0A0J9YW62	118 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	ZNHIT1	O43257	154 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	SGCE	O43556	437 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	TRAPPC6A	O75865	159 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	ZBTB25	P24278	435 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	GPX4	P36969	197 aa	Predicted RBP	12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	LUM	P51884	338 aa	Predicted RBP	12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	RAB4B	P61018	213 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	KISS1	Q15726	138 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	RGS7BP	Q6MZT1	257 aa	Predicted RBP	12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	UNQ6126/PRO20091	Q6UXV3	157 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	PGAP1	Q75T13	922 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	DOK3	Q7L591	496 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	NANP	Q8TBE9	248 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	IMMP1L	Q96LU5	166 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	ZNF251	Q9BRH9	671 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	PIGL	Q9Y2B2	252 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	DNAJC13	O75165	2243 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	DOCK10	Q96BY6	2186 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	LIF	P15018	202 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	HIST3H3	Q16695	136 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	OR9K2	Q8NGE7	335 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	OR14K1	Q8NGZ2	314 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	ROBO4	Q8WZ75	1007 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	S100A13	Q99584	98 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	SRXN1	Q9BYN0	137 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	ULBP2	Q9BZM5	246 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	MS4A7	Q9GZW8	240 aa	Predicted RBP	12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	NELFA	Q9H3P2	528 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	MOB1A	Q9H8S9	216 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	GPR37	O15354	613 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	TXNL1	O43396	289 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	MB	P02144	154 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	MELTF	P08582	738 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	RPA2	P15927	270 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	HIST1H1D	P16402	221 aa	Known RBP	12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	ADH6	P28332	368 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	MPG	P29372	298 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	BLVRB	P30043	206 aa	Predicted RBP	12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	DLST	P36957	453 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	GRB2	P62993	217 aa	Known RBP	12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	UBE2V2	Q15819	145 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	ZNF529	Q6P280	563 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	PNLDC1	Q8NA58	520 aa	Known RBP	12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	ADPRHL1	Q8NDY3	354 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	GJC3	Q8NFK1	279 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	C1orf147	Q96MC9	270 aa	Predicted RBP	12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	REG4	Q9BYZ8	158 aa		12.19	□□□□□ -0.46
CACNA1C-231	ENST00000616390	KANTR	A0A1W2PQU2	76 aa		12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	EFS	O43281	561 aa		12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	GABRR1	P24046	479 aa		12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	BMI1	P35226	326 aa		12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	WNT5A	P41221	380 aa		12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	DSCR4	P56555	118 aa	Predicted RBP	12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	TAS2R60	P59551	318 aa		12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	ENDOG	Q14249	297 aa	Known RBP	12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	EIF2S3L	Q2VIR3	472 aa	Known RBP	12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	NKAPL	Q5M9Q1	402 aa		12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	ELP2	Q6IA86	826 aa		12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	C11orf87	Q6NUJ2	197 aa		12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	PLXDC2	Q6UX71	529 aa		12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	NAXD	Q8IW45	347 aa		12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	PDZD9	Q8IXQ8	264 aa		12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	OR14L1P	Q8NHC6	308 aa		12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	ZNF701	Q9NV72	531 aa	Predicted RBP	12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	DHH	O43323	396 aa		12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	LAMTOR5	O43504	91 aa		12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	AMY2B	P19961	511 aa		12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	TAGLN2	P37802	199 aa	Known RBP	12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	FOLR3	P41439	243 aa		12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	OR3A2	P47893	321 aa		12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	SNAI3	Q3KNW1	292 aa		12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	DPPA2	Q7Z7J5	298 aa		12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	OPN3	Q9H1Y3	402 aa	Predicted RBP	12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	OR10A2	Q9H208	303 aa		12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	ESRP2	Q9H6T0	727 aa	Known RBP	12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	WDR54	Q9H977	334 aa		12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	PISD	Q9UG56	409 aa		12.18	□□□□□ -0.46
CACNA1C-231	ENST00000616390	NXT1	Q9UKK6	140 aa	Known RBP	12.18	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms