RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 ADAM20O43506 726 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 XRCC2O43543 280 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 SPRY1O43609 319 aaPredicted RBP4.73□□□□□ -1.65
CPNE3-208ENST00000614678 ANGPTL7O43827 346 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 HAAOP46952 286 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 CDC42P60953 191 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 DCAF12L2Q5VW00 463 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 UNQ6126/PRO20091Q6UXV3 157 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 ELMOD2Q8IZ81 293 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 OR4M1Q8NGD0 313 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 OR51A2Q8NGJ7 313 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 RAB3IPQ96QF0 476 aaPredicted RBP4.73□□□□□ -1.65
CPNE3-208ENST00000614678 MYOZ1Q9NP98 299 aaPredicted RBP4.73□□□□□ -1.65
CPNE3-208ENST00000614678 SMPD3Q9NY59 655 aaPredicted RBP4.73□□□□□ -1.65
CPNE3-208ENST00000614678 HAO2Q9NYQ3 351 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 ZNF69Q9UC07 566 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 NUFIP1Q9UHK0 495 aaKnown RBP4.73□□□□□ -1.65
CPNE3-208ENST00000614678 MGAM2Q2M2H8 2515 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 IGKV1D-17A0A075B6S4 117 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 DVL1O14640 695 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 ZFPL1O95159 310 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 JUNBP17275 347 aaPredicted RBP4.72□□□□□ -1.65
CPNE3-208ENST00000614678 TNFSF4P23510 183 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 GATA4P43694 442 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 SRP9P49458 86 aaKnown RBP4.72□□□□□ -1.65
CPNE3-208ENST00000614678 ADARB1P78563 741 aaKnown RBP4.72□□□□□ -1.65
CPNE3-208ENST00000614678 KLRD1Q13241 179 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 PLCXD3Q63HM9 321 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 ZNF454Q8N9F8 522 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 OR52H1Q8NGJ2 320 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 OR2G2Q8NGZ5 317 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 STMN2Q93045 179 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 C9orf16Q9BUW7 83 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 ING3Q9NXR8 418 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 RNF7Q9UBF6 113 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 ZNF391Q9UJN7 358 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 FBXO9Q9UK97 447 aaPredicted RBP4.72□□□□□ -1.65
CPNE3-208ENST00000614678 MAB21L2Q9Y586 359 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 LOC107986453A0A1B0GWG9 222 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 DAPL1A0PJW8 107 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 ZNF670-ZNF695F2Z2N8 137 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 F5H0A9 414 aaPredicted RBP4.72□□□□□ -1.65
CPNE3-208ENST00000614678 FAM157CP0CG43 387 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 MDH2P40926 338 aaKnown RBP4.72□□□□□ -1.65
CPNE3-208ENST00000614678 ARF6P62330 175 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 BCL2L15Q5TBC7 163 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 ZNF691Q5VV52 312 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 WDR25Q64LD2 544 aaPredicted RBP4.72□□□□□ -1.65
CPNE3-208ENST00000614678 BAIAP2L2Q6UXY1 529 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 C1QL2Q7Z5L3 287 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 CD177Q8N6Q3 437 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 SEMA6DQ8NFY4 1073 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 GATAD2BQ8WXI9 593 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 FGGYQ96C11 551 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 PCGF1Q9BSM1 259 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 ALG8Q9BVK2 526 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 SSBP3Q9BWW4 388 aaPredicted RBP4.72□□□□□ -1.65
CPNE3-208ENST00000614678 OR51I2Q9H344 312 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 SIRT7Q9NRC8 400 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 ERVK13-1Q9NX77 482 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 WARS2Q9UGM6 360 aaKnown RBP4.72□□□□□ -1.65
CPNE3-208ENST00000614678 DSCAML1Q8TD84 2053 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 TRAV40A0A0B4J280 105 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 IGKV1-12A0A0C4DH73 117 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 METTL15A6NJ78 407 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 IGKV1D-12P01611 117 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 OR2T7P0C7T2 308 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 LIPAP38571 399 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 SOX2P48431 317 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 BLVRAP53004 296 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 SNRPGP62308 76 aaKnown RBP4.72□□□□□ -1.65
CPNE3-208ENST00000614678 MOGQ16653 247 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 OGFRL1Q5TC84 451 aaPredicted RBP4.72□□□□□ -1.65
CPNE3-208ENST00000614678 KCTD18Q6PI47 426 aaPredicted RBP4.72□□□□□ -1.65
CPNE3-208ENST00000614678 C5orf24Q7Z6I8 188 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 GID4Q8IVV7 300 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 KLHL36Q8N4N3 616 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 OR2T27Q8NH04 317 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 ST8SIA4Q92187 359 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 POP5Q969H6 163 aaKnown RBP4.72□□□□□ -1.65
CPNE3-208ENST00000614678 TIMD4Q96H15 378 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 COG8Q96MW5 612 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 MTCH1Q9NZJ7 389 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 CMYA5Q8N3K9 4069 aa4.72□□□□□ -1.65
CPNE3-208ENST00000614678 OOEPA6NGQ2 149 aa4.71□□□□□ -1.65
CPNE3-208ENST00000614678 H3BSA7 217 aa4.71□□□□□ -1.65
CPNE3-208ENST00000614678 DHRS3O75911 302 aa4.71□□□□□ -1.65
CPNE3-208ENST00000614678 NRASP01111 189 aa4.71□□□□□ -1.65
CPNE3-208ENST00000614678 PIPP12273 146 aaPredicted RBP4.71□□□□□ -1.65
CPNE3-208ENST00000614678 SRP14P37108 136 aaKnown RBP4.71□□□□□ -1.65
CPNE3-208ENST00000614678 FGF12P61328 243 aa4.71□□□□□ -1.65
CPNE3-208ENST00000614678 GNB2P62879 340 aa4.71□□□□□ -1.65
CPNE3-208ENST00000614678 OCLNQ16625 522 aa4.71□□□□□ -1.65
CPNE3-208ENST00000614678 ZMAT1Q5H9K5 638 aa4.71□□□□□ -1.65
CPNE3-208ENST00000614678 FAM76BQ5HYJ3 339 aa4.71□□□□□ -1.65
CPNE3-208ENST00000614678 BTN2A1Q7KYR7 527 aa4.71□□□□□ -1.65
CPNE3-208ENST00000614678 GLCCI1Q86VQ1 547 aa4.71□□□□□ -1.65
CPNE3-208ENST00000614678 ZDHHC23Q8IYP9 409 aa4.71□□□□□ -1.65
CPNE3-208ENST00000614678 GGHQ92820 318 aa4.71□□□□□ -1.65
CPNE3-208ENST00000614678 SLAMF9Q96A28 289 aa4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms