RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 CHRM2P08172 466 aa12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 DLSTP36957 453 aa12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 DUSP3P51452 185 aaPredicted RBP12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 RRADP55042 308 aa12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 SNU13P55769 128 aaKnown RBP12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 TUSC1Q2TAM9 212 aa12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 ACER2Q5QJU3 275 aa12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 CLVS2Q5SYC1 327 aa12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 DTWD2Q8NBA8 298 aa12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 CSNK2A3Q8NEV1 391 aa12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 ST8SIA2Q92186 375 aa12.3□□□□□ -0.44
PCDHGA3-202ENST00000612467 SGCEO43556 437 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 IL2RAP01589 272 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 CD8AP01732 235 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 LCATP04180 440 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 C4BPBP20851 252 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 GDF1P27539 372 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 ARHGDIBP52566 201 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 ECH1Q13011 328 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 TAF9Q16594 264 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 DCAF12Q5T6F0 453 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 PEAR1Q5VY43 1037 aaPredicted RBP12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 JMJD6Q6NYC1 403 aaPredicted RBP12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 OR2W3Q7Z3T1 314 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 TERB2Q8NHR7 220 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 PHB2Q99623 299 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 ZNF471Q9BX82 626 aaPredicted RBP12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 PECRQ9BY49 303 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 P4HTMQ9NXG6 502 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 FOXJ2Q9P0K8 574 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 KIF25Q9UIL4 384 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 TNFSF18Q9UNG2 199 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 V9GYS6 101 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 ZNF716A6NP11 495 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 TMEM225BP0DP42 221 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 TRA2AQ13595 282 aaKnown RBP eCLIP12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 CEACAM16Q2WEN9 425 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 ZDHHC22Q8N966 263 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 PNLDC1Q8NA58 520 aaKnown RBP12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 OR56B1Q8NGI3 324 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 OR5H2Q8NGV7 314 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 CHST5Q9GZS9 411 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 EHFQ9NZC4 300 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 COMMD9Q9P000 198 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 FBLN5Q9UBX5 448 aa12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 ZNF107Q9UII5 783 aaPredicted RBP12.29□□□□□ -0.44
PCDHGA3-202ENST00000612467 KNG1P01042 644 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 CCL2P13500 99 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 PRF1P14222 555 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 OTX1P32242 354 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 ZNF84P51523 738 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 FOXG1P55316 489 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 MTCP1P56278 107 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 SUPT4H1P63272 117 aaKnown RBP12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 ANKRD55Q3KP44 614 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 AADACL3Q5VUY0 350 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 AAED1Q7RTV5 226 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 OR6K3Q8NGY3 331 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 PSMF1Q92530 271 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 NTNG2Q96CW9 530 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 REEP6Q96HR9 211 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 RTBDNQ9BSG5 229 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 MYOZ1Q9NP98 299 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 PLA2G3Q9NZ20 509 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 DSPP15924 2871 aaKnown RBP12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 COL27A1Q8IZC6 1860 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 DHRS7CA6NNS2 312 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 C3orf80F5H4A9 247 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 YKT6O15498 198 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 GSTP1P09211 210 aaKnown RBP12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 CTSSP25774 331 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 OPRM1P35372 400 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 RAC3P60763 192 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 HIST1H3AP68431 136 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 HIST2H3PS2Q5TEC6 136 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 CLEC18BQ6UXF7 455 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 HIST2H3AQ71DI3 136 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 RAB11FIP2Q7L804 512 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 C5orf24Q7Z6I8 188 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 GALNT11Q8NCW6 608 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 RRNAD1Q96FB5 475 aaKnown RBP12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 SIGLEC12Q96PQ1 595 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 URM1Q9BTM9 101 aaKnown RBP12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 FAAP24Q9BTP7 215 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 C12orf4Q9NQ89 552 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 GPR132Q9UNW8 380 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 PCDHGA1Q9Y5H4 931 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 TTC28Q96AY4 2481 aa12.28□□□□□ -0.44
PCDHGA3-202ENST00000612467 SHANK1Q9Y566 2161 aa12.27□□□□□ -0.44
PCDHGA3-202ENST00000612467 ZNF587BE7ETH6 402 aa12.27□□□□□ -0.44
PCDHGA3-202ENST00000612467 H0YIZ8 118 aa12.27□□□□□ -0.44
PCDHGA3-202ENST00000612467 NUPL2O15504 423 aaKnown RBP12.27□□□□□ -0.44
PCDHGA3-202ENST00000612467 SYNGR3O43761 229 aa12.27□□□□□ -0.44
PCDHGA3-202ENST00000612467 VAMP5O95183 116 aa12.27□□□□□ -0.44
PCDHGA3-202ENST00000612467 NAT2P11245 290 aa12.27□□□□□ -0.44
PCDHGA3-202ENST00000612467 SRD5A2P31213 254 aa12.27□□□□□ -0.44
PCDHGA3-202ENST00000612467 HTR5AP47898 357 aa12.27□□□□□ -0.44
PCDHGA3-202ENST00000612467 PSG4Q00888 419 aa12.27□□□□□ -0.44
PCDHGA3-202ENST00000612467 FAM27BQ5VT28 67 aa12.27□□□□□ -0.44
PCDHGA3-202ENST00000612467 ELP2Q6IA86 826 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms