RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 GUSBP08236 651 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 TMEM225BP0DP42 221 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 ZNF17P17021 662 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 PTGER4P35408 488 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 TMEM33P57088 247 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 PHF19Q5T6S3 580 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 CPEB2Q7Z5Q1 589 aaKnown RBP17.97■□□□□ 0.47
SSBP3-216ENST00000610401 RBM24Q9BX46 236 aaKnown RBP17.97■□□□□ 0.47
SSBP3-216ENST00000610401 NIT2Q9NQR4 276 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 DBX1A6NMT0 343 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 TIAF1O95411 115 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 HPNP05981 417 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 CLDN17P56750 224 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 DDIT4LQ96D03 193 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 SPSB2Q99619 263 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 FAAP24Q9BTP7 215 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 NMES1Q9C002 83 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 RAB33BQ9H082 229 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.97■□□□□ 0.474e-7■■■■■ 27
SSBP3-216ENST00000610401 DIDO1Q9BTC0 2240 aaKnown RBP17.97■□□□□ 0.47
SSBP3-216ENST00000610401 LINC00587B1AMM8 73 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 CSTBP04080 98 aaKnown RBP17.97■□□□□ 0.47
SSBP3-216ENST00000610401 JMJD7P0C870 316 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 NAT2P11245 290 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 ZNF43P17038 809 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 FASLGP48023 281 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 CYCSP99999 105 aaKnown RBP17.97■□□□□ 0.47
SSBP3-216ENST00000610401 SLC26A1Q9H2B4 701 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 MCTS1Q9ULC4 181 aaKnown RBP17.97■□□□□ 0.47
SSBP3-216ENST00000610401 CA14Q9ULX7 337 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 MMACHCQ9Y4U1 282 aa17.97■□□□□ 0.47
SSBP3-216ENST00000610401 A0A1W2PPH5 198 aa17.96■□□□□ 0.47
SSBP3-216ENST00000610401 ZNF726A6NNF4 738 aa17.96■□□□□ 0.47
SSBP3-216ENST00000610401 ZNF850A8MQ14 1090 aa17.96■□□□□ 0.47
SSBP3-216ENST00000610401 CBX5P45973 191 aa17.96■□□□□ 0.47
SSBP3-216ENST00000610401 HOXA1P49639 335 aaPredicted RBP17.96■□□□□ 0.47
SSBP3-216ENST00000610401 MIDNQ504T8 468 aa17.96■□□□□ 0.47
SSBP3-216ENST00000610401 FAM180AQ6UWF9 173 aa17.96■□□□□ 0.47
SSBP3-216ENST00000610401 FAM24BQ8N5W8 94 aa17.96■□□□□ 0.47
SSBP3-216ENST00000610401 SLC5A7Q9GZV3 580 aa17.96■□□□□ 0.47
SSBP3-216ENST00000610401 SH3BGRL3Q9H299 93 aa17.96■□□□□ 0.47
SSBP3-216ENST00000610401 GPR173Q9NS66 373 aa17.96■□□□□ 0.47
SSBP3-216ENST00000610401 COA4Q9NYJ1 87 aa17.96■□□□□ 0.47
SSBP3-216ENST00000610401 B3GAT1Q9P2W7 334 aa17.96■□□□□ 0.47
SSBP3-216ENST00000610401 C14orf166Q9Y224 244 aaKnown RBP17.96■□□□□ 0.47
SSBP3-216ENST00000610401 MTRF1O75570 445 aaKnown RBP17.96■□□□□ 0.47
SSBP3-216ENST00000610401 HEXBP07686 556 aa17.96■□□□□ 0.47
SSBP3-216ENST00000610401 ACAA1P09110 424 aaPredicted RBP17.96■□□□□ 0.47
SSBP3-216ENST00000610401 SPEM2Q0P670 501 aa17.96■□□□□ 0.47
SSBP3-216ENST00000610401 DHRS7BQ6IAN0 325 aaPredicted RBP17.96■□□□□ 0.47
SSBP3-216ENST00000610401 OR5L1Q8NGL2 311 aa17.96■□□□□ 0.47
SSBP3-216ENST00000610401 SLAMF9Q96A28 289 aa17.96■□□□□ 0.47
SSBP3-216ENST00000610401 KIRREL1Q96J84 757 aa17.96■□□□□ 0.47
SSBP3-216ENST00000610401 SPACA1Q9HBV2 294 aa17.96■□□□□ 0.47
SSBP3-216ENST00000610401 MYOZ1Q9NP98 299 aaPredicted RBP17.96■□□□□ 0.47
SSBP3-216ENST00000610401 LIPT2A6NK58 231 aa17.95■□□□□ 0.46
SSBP3-216ENST00000610401 F8VVB4 439 aa17.95■□□□□ 0.46
SSBP3-216ENST00000610401 F8VWA3 439 aa17.95■□□□□ 0.46
SSBP3-216ENST00000610401 TSPAN15O95858 294 aa17.95■□□□□ 0.46
SSBP3-216ENST00000610401 ZNF14P17017 642 aaPredicted RBP17.95■□□□□ 0.46
SSBP3-216ENST00000610401 OGFOD3Q6PK18 319 aa17.95■□□□□ 0.46
SSBP3-216ENST00000610401 MEX3BQ6ZN04 569 aaKnown RBP17.95■□□□□ 0.46
SSBP3-216ENST00000610401 DTWD2Q8NBA8 298 aa17.95■□□□□ 0.46
SSBP3-216ENST00000610401 C2orf50Q96LR7 162 aa17.95■□□□□ 0.46
SSBP3-216ENST00000610401 URM1Q9BTM9 101 aaKnown RBP17.95■□□□□ 0.46
SSBP3-216ENST00000610401 ZNF160Q9HCG1 818 aa17.95■□□□□ 0.46
SSBP3-216ENST00000610401 H3BMH7 237 aa17.95■□□□□ 0.46
SSBP3-216ENST00000610401 IFI6P09912 130 aa17.95■□□□□ 0.46
SSBP3-216ENST00000610401 NQO2P16083 231 aa17.95■□□□□ 0.46
SSBP3-216ENST00000610401 TAS2R31P59538 309 aa17.95■□□□□ 0.46
SSBP3-216ENST00000610401 C17orf67Q0P5P2 114 aa17.95■□□□□ 0.46
SSBP3-216ENST00000610401 PMS2P1A4D2B8 440 aa17.95■□□□□ 0.46
SSBP3-216ENST00000610401 C2CD4DB7Z1M9 353 aa17.95■□□□□ 0.46
SSBP3-216ENST00000610401 HKR1P10072 659 aa17.95■□□□□ 0.46
SSBP3-216ENST00000610401 CAV2P51636 162 aa17.95■□□□□ 0.46
SSBP3-216ENST00000610401 SULF2Q8IWU5 870 aa17.95■□□□□ 0.46
SSBP3-216ENST00000610401 C1orf147Q96MC9 270 aaPredicted RBP17.95■□□□□ 0.46
SSBP3-216ENST00000610401 SEC11CQ9BY50 192 aa17.95■□□□□ 0.46
SSBP3-216ENST00000610401 IFT22Q9H7X7 185 aa17.95■□□□□ 0.46
SSBP3-216ENST00000610401 ZNF708P17019 499 aa17.94■□□□□ 0.46
SSBP3-216ENST00000610401 UBE2V2Q15819 145 aa17.94■□□□□ 0.46
SSBP3-216ENST00000610401 FNDC9Q8TBE3 224 aa17.94■□□□□ 0.46
SSBP3-216ENST00000610401 ASB13Q8WXK3 278 aa17.94■□□□□ 0.46
SSBP3-216ENST00000610401 SGK3Q96BR1 496 aa17.94■□□□□ 0.46
SSBP3-216ENST00000610401 SDHAF3Q9NRP4 125 aa17.94■□□□□ 0.46
SSBP3-216ENST00000610401 PIGLQ9Y2B2 252 aa17.94■□□□□ 0.46
SSBP3-216ENST00000610401 B3GALT5Q9Y2C3 310 aa17.94■□□□□ 0.46
SSBP3-216ENST00000610401 IGHG1P01857 330 aa17.94■□□□□ 0.46
SSBP3-216ENST00000610401 CELA2AP08217 269 aa17.94■□□□□ 0.46
SSBP3-216ENST00000610401 DCAF7P61962 342 aa17.94■□□□□ 0.46
SSBP3-216ENST00000610401 CLINT1Q14677 625 aa17.94■□□□□ 0.46
SSBP3-216ENST00000610401 OR56B1Q8NGI3 324 aa17.94■□□□□ 0.46
SSBP3-216ENST00000610401 UQCC2Q9BRT2 126 aa17.94■□□□□ 0.46
SSBP3-216ENST00000610401 WNT16Q9UBV4 365 aa17.94■□□□□ 0.46
SSBP3-216ENST00000610401 HLA-GP17693 338 aa17.93■□□□□ 0.46
SSBP3-216ENST00000610401 HABP2Q14520 560 aaPredicted RBP17.93■□□□□ 0.46
SSBP3-216ENST00000610401 ADAMTS17Q8TE56 1095 aa17.93■□□□□ 0.46
SSBP3-216ENST00000610401 ZNF837Q96EG3 531 aaPredicted RBP17.93■□□□□ 0.46
SSBP3-216ENST00000610401 PUS1Q9Y606 427 aaKnown RBP eCLIP17.93■□□□□ 0.46
SSBP3-216ENST00000610401 URGCP-MRPS24S4R325 110 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms