RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 P2RY10O00398 339 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 CDIPTO14735 213 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 SERPINA3P01011 423 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 HTR1AP08908 422 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 RPS2P15880 293 aaKnown RBP11.95□□□□□ -0.5
HDDC2-209ENST00000609477 FAHP16930 419 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 PSMB10P40306 273 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 OR12D2P58182 307 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 SCGB2A2Q13296 93 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 MED21Q13503 144 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 MICBQ29980 383 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 WDR38Q5JTN6 314 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 LHFPL3Q86UP9 236 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 PRSS35Q8N3Z0 413 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 OR8B3Q8NGG8 313 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 OR52I1Q8NGK6 324 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 ZNF671Q8TAW3 534 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 HPSE2Q8WWQ2 592 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 PELI1Q96FA3 418 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 C4orf36Q96KX1 117 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 OR8B2Q96RD0 313 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 ZNF649Q9BS31 505 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 SSBP3Q9BWW4 388 aaPredicted RBP11.95□□□□□ -0.5
HDDC2-209ENST00000609477 VCX3BQ9H321 246 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 PLEKHA1Q9HB21 404 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 FRRS1LQ9P0K9 344 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 KAAG1Q9UBP8 84 aa11.95□□□□□ -0.5
HDDC2-209ENST00000609477 SRRM5B3KS81 715 aa11.94□□□□□ -0.5
HDDC2-209ENST00000609477 H0YHG0 523 aa11.94□□□□□ -0.5
HDDC2-209ENST00000609477 J3QLW9 94 aa11.94□□□□□ -0.5
HDDC2-209ENST00000609477 TNFRSF13BO14836 293 aaPredicted RBP11.94□□□□□ -0.5
HDDC2-209ENST00000609477 ZNF19P17023 458 aa11.94□□□□□ -0.5
HDDC2-209ENST00000609477 SRD5A1P18405 259 aa11.94□□□□□ -0.5
HDDC2-209ENST00000609477 GPM6AP51674 278 aa11.94□□□□□ -0.5
HDDC2-209ENST00000609477 CSNK2BP67870 215 aa11.94□□□□□ -0.5
HDDC2-209ENST00000609477 DCAF12L2Q5VW00 463 aa11.94□□□□□ -0.5
HDDC2-209ENST00000609477 PLCXD3Q63HM9 321 aa11.94□□□□□ -0.5
HDDC2-209ENST00000609477 ZNF826PQ6ZT77 177 aa11.94□□□□□ -0.5
HDDC2-209ENST00000609477 KCTD8Q6ZWB6 473 aa11.94□□□□□ -0.5
HDDC2-209ENST00000609477 MOB3CQ70IA8 216 aa11.94□□□□□ -0.5
HDDC2-209ENST00000609477 ZNF573Q86YE8 665 aa11.94□□□□□ -0.5
HDDC2-209ENST00000609477 SCCPDHQ8NBX0 429 aa11.94□□□□□ -0.5
HDDC2-209ENST00000609477 FBLIM1Q8WUP2 373 aa11.94□□□□□ -0.5
HDDC2-209ENST00000609477 LRRC29Q8WV35 223 aa11.94□□□□□ -0.5
HDDC2-209ENST00000609477 PP6455Q8WZ26 134 aa11.94□□□□□ -0.5
HDDC2-209ENST00000609477 TFAP2CQ92754 450 aa11.94□□□□□ -0.5
HDDC2-209ENST00000609477 RNF166Q96A37 237 aaPredicted RBP11.94□□□□□ -0.5
HDDC2-209ENST00000609477 DNTTIP1Q9H147 329 aa11.94□□□□□ -0.5
HDDC2-209ENST00000609477 OR51I2Q9H344 312 aa11.94□□□□□ -0.5
HDDC2-209ENST00000609477 PPP1R3EQ9H7J1 279 aa11.94□□□□□ -0.5
HDDC2-209ENST00000609477 LPAR2Q9HBW0 351 aa11.94□□□□□ -0.5
HDDC2-209ENST00000609477 NKX1-2Q9UD57 310 aaPredicted RBP11.94□□□□□ -0.5
HDDC2-209ENST00000609477 ANKRD61A6NGH8 418 aa11.93□□□□□ -0.5
HDDC2-209ENST00000609477 ZNF732B4DXR9 585 aa11.93□□□□□ -0.5
HDDC2-209ENST00000609477 GATBO75879 557 aaKnown RBP11.93□□□□□ -0.5
HDDC2-209ENST00000609477 ZNF205O95201 554 aa11.93□□□□□ -0.5
HDDC2-209ENST00000609477 CLIC3O95833 236 aa11.93□□□□□ -0.5
HDDC2-209ENST00000609477 ACAA1P09110 424 aaPredicted RBP11.93□□□□□ -0.5
HDDC2-209ENST00000609477 CCDC159P0C7I6 412 aa11.93□□□□□ -0.5
HDDC2-209ENST00000609477 PIPP12273 146 aaPredicted RBP11.93□□□□□ -0.5
HDDC2-209ENST00000609477 TGM4P49221 684 aa11.93□□□□□ -0.5
HDDC2-209ENST00000609477 GBX2P52951 348 aaPredicted RBP11.93□□□□□ -0.5
HDDC2-209ENST00000609477 GNB2P62879 340 aa11.93□□□□□ -0.5
HDDC2-209ENST00000609477 LCN2P80188 198 aa11.93□□□□□ -0.5
HDDC2-209ENST00000609477 ALKBH1Q13686 389 aaKnown RBP11.93□□□□□ -0.5
HDDC2-209ENST00000609477 SMN1Q16637 294 aaKnown RBP11.93□□□□□ -0.5
HDDC2-209ENST00000609477 CCDC58Q4VC31 144 aa11.93□□□□□ -0.5
HDDC2-209ENST00000609477 CEP78Q5JTW2 689 aa11.93□□□□□ -0.5
HDDC2-209ENST00000609477 FAM201AQ5SY85 155 aa11.93□□□□□ -0.5
HDDC2-209ENST00000609477 FAHD2BQ6P2I3 314 aaPredicted RBP11.93□□□□□ -0.5
HDDC2-209ENST00000609477 TMPRSS11AQ6ZMR5 421 aa11.93□□□□□ -0.5
HDDC2-209ENST00000609477 CNIH3Q8TBE1 160 aa11.93□□□□□ -0.5
HDDC2-209ENST00000609477 FAHD2AQ96GK7 314 aa11.93□□□□□ -0.5
HDDC2-209ENST00000609477 CHST5Q9GZS9 411 aa11.93□□□□□ -0.5
HDDC2-209ENST00000609477 PLCXD1Q9NUJ7 323 aa11.93□□□□□ -0.5
HDDC2-209ENST00000609477 RASL12Q9NYN1 266 aa11.93□□□□□ -0.5
HDDC2-209ENST00000609477 CNOT2Q9NZN8 540 aaKnown RBP11.93□□□□□ -0.5
HDDC2-209ENST00000609477 ERVK-18Q9QC07 812 aa11.93□□□□□ -0.5
HDDC2-209ENST00000609477 CLN8Q9UBY8 286 aa11.93□□□□□ -0.5
HDDC2-209ENST00000609477 OR5V1Q9UGF6 321 aa11.93□□□□□ -0.5
HDDC2-209ENST00000609477 HHLA2Q9UM44 414 aa11.93□□□□□ -0.5
HDDC2-209ENST00000609477 DIMT1Q9UNQ2 313 aaKnown RBP11.93□□□□□ -0.5
HDDC2-209ENST00000609477 SLC7A11Q9UPY5 501 aa11.93□□□□□ -0.5
HDDC2-209ENST00000609477 CAB39Q9Y376 341 aaPredicted RBP11.93□□□□□ -0.5
HDDC2-209ENST00000609477 EXOSC1Q9Y3B2 195 aaKnown RBP11.93□□□□□ -0.5
HDDC2-209ENST00000609477 MXRA5Q9NR99 2828 aa11.93□□□□□ -0.5
HDDC2-209ENST00000609477 LOC107986453A0A1B0GWG9 222 aa11.92□□□□□ -0.5
HDDC2-209ENST00000609477 EFCAB10A6NFE3 127 aa11.92□□□□□ -0.5
HDDC2-209ENST00000609477 TMEM212A6NML5 194 aa11.92□□□□□ -0.5
HDDC2-209ENST00000609477 KIAA1324LA8MWY0 1029 aaPredicted RBP11.92□□□□□ -0.5
HDDC2-209ENST00000609477 C3orf80F5H4A9 247 aa11.92□□□□□ -0.5
HDDC2-209ENST00000609477 GPR37O15354 613 aa11.92□□□□□ -0.5
HDDC2-209ENST00000609477 LIMS3P0CW19 117 aa11.92□□□□□ -0.5
HDDC2-209ENST00000609477 LIMS4P0CW20 117 aa11.92□□□□□ -0.5
HDDC2-209ENST00000609477 PPIAL4GP0DN37 164 aa11.92□□□□□ -0.5
HDDC2-209ENST00000609477 MYL12AP19105 171 aa11.92□□□□□ -0.5
HDDC2-209ENST00000609477 ZFP36P26651 326 aaKnown RBP11.92□□□□□ -0.5
HDDC2-209ENST00000609477 KIR3DL2P43630 455 aa11.92□□□□□ -0.5
HDDC2-209ENST00000609477 PITPNBP48739 271 aa11.92□□□□□ -0.5
HDDC2-209ENST00000609477 HNRNPA0Q13151 305 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms