RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 SIGLEC5O15389 551 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 AKR7A2O43488 359 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 E2F6O75461 281 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 RHBDL1O75783 438 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 CLPXO76031 633 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 TFF1P04155 84 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 ANXA8P13928 327 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 HOXB6P17509 224 aaKnown RBP6.25□□□□□ -1.41
CUX1-219ENST00000606749 MAP2K3P46734 347 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 GPM6AP51674 278 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 CAV3P56539 151 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 PSMA6P60900 246 aaKnown RBP6.25□□□□□ -1.41
CUX1-219ENST00000606749 GUCA2AQ02747 115 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 PRB3Q04118 309 aaPredicted RBP6.25□□□□□ -1.41
CUX1-219ENST00000606749 APOFQ13790 326 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 TAF9Q16594 264 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 DGUOKQ16854 277 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 CEACAM21Q3KPI0 293 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 DEGS2Q6QHC5 323 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 KRT77Q7Z794 578 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 CMTM4Q8IZR5 234 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 ZSCAN4Q8NAM6 433 aaPredicted RBP6.25□□□□□ -1.41
CUX1-219ENST00000606749 ZNF671Q8TAW3 534 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 H1FXQ92522 213 aaKnown RBP6.25□□□□□ -1.41
CUX1-219ENST00000606749 TNFRSF14Q92956 283 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 ITFG2Q969R8 447 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 GAFA1Q96PS6 74 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 HIST1H2AAQ96QV6 131 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 TEAD3Q99594 435 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 YIPF3Q9GZM5 350 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 SEMA6AQ9H2E6 1030 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 OR51I2Q9H344 312 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 SIRT7Q9NRC8 400 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 NLKQ9UBE8 527 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 SLC25A10Q9UBX3 287 aaPredicted RBP6.25□□□□□ -1.41
CUX1-219ENST00000606749 LAMP5Q9UJQ1 280 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 LRP12Q9Y561 859 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 MEGF8Q7Z7M0 2845 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 MGAM2Q2M2H8 2515 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 IGKV1D-17A0A075B6S4 117 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 ZNF816-ZNF321PA0A0X1KG74 233 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 A0A1W2PRD5 423 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 A0A1W2PRF3 423 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 A0A1W2PRM7 423 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 CCDC182A6NF36 153 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 NKX6-3A6NJ46 265 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 OR2AT4A6NND4 320 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 ZNF732B4DXR9 585 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 M0R1W7 72 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 PSMD9O00233 223 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 TIMM23O14925 209 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 NPFFO15130 113 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 IGLV3-1P01715 115 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 FBP1P09467 338 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 PSG2P11465 335 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 ATP6V1B1P15313 513 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 NDUFB7P17568 137 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 GLRA1P23415 457 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 EEF1B2P24534 225 aaKnown RBP6.24□□□□□ -1.41
CUX1-219ENST00000606749 GABRA2P47869 451 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 UBE2E1P51965 193 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 CRISP1P54107 249 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 PROK1P58294 105 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 RPS7P62081 194 aaKnown RBP6.24□□□□□ -1.41
CUX1-219ENST00000606749 GNG3P63215 75 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 CBX1P83916 185 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 ROM1Q03395 351 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 KLRD1Q13241 179 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 SNAPC1Q16533 368 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 PDLIM3Q53GG5 364 aaPredicted RBP6.24□□□□□ -1.41
CUX1-219ENST00000606749 DMRTC1Q5HYR2 192 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 CEP78Q5JTW2 689 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 ASPHD2Q6ICH7 369 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 KCTD18Q6PI47 426 aaPredicted RBP6.24□□□□□ -1.41
CUX1-219ENST00000606749 BRICD5Q6PL45 260 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 GDPGP1Q6ZNW5 385 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 Q6ZSV7 163 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 MOB3CQ70IA8 216 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 TRPM8Q7Z2W7 1104 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 ZDHHC23Q8IYP9 409 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 PNKDQ8N490 385 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 ZNRF1Q8ND25 227 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 PAPD5Q8NDF8 572 aaKnown RBP6.24□□□□□ -1.41
CUX1-219ENST00000606749 OR5A2Q8NGI9 324 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 FAM81AQ8TBF8 368 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 LRTOMTQ8WZ04 291 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 PPP1R14AQ96A00 147 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 DUS3LQ96G46 650 aaKnown RBP6.24□□□□□ -1.41
CUX1-219ENST00000606749 TEX12Q9BXU0 123 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 MROQ9BYG7 248 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 PBOV1Q9GZY1 135 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 C16orf95Q9H693 158 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 YY1AP1Q9H869 796 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 SLC25A19Q9HC21 320 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 FAM206AQ9NX38 181 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 TVP23BQ9NYZ1 205 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 ZNRD1Q9P1U0 126 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 DNAJB9Q9UBS3 223 aa6.24□□□□□ -1.41
CUX1-219ENST00000606749 CAB39Q9Y376 341 aaPredicted RBP6.24□□□□□ -1.41
CUX1-219ENST00000606749 MAB21L2Q9Y586 359 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms