RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 GNG3P63215 75 aa12.03□□□□□ -0.48
CTSA-211ENST00000606066 CDK5R1Q15078 307 aa12.03□□□□□ -0.48
CTSA-211ENST00000606066 CEP78Q5JTW2 689 aa12.03□□□□□ -0.48
CTSA-211ENST00000606066 PLCXD3Q63HM9 321 aa12.03□□□□□ -0.48
CTSA-211ENST00000606066 TMEM42Q69YG0 159 aa12.03□□□□□ -0.48
CTSA-211ENST00000606066 OR1M1Q8NGA1 313 aa12.03□□□□□ -0.48
CTSA-211ENST00000606066 ZNF420Q8TAQ5 688 aaPredicted RBP12.03□□□□□ -0.48
CTSA-211ENST00000606066 PP6455Q8WZ26 134 aa12.03□□□□□ -0.48
CTSA-211ENST00000606066 UFSP2Q9NUQ7 469 aa12.03□□□□□ -0.48
CTSA-211ENST00000606066 WIPI2Q9Y4P8 454 aa12.03□□□□□ -0.48
CTSA-211ENST00000606066 A0A096LNT2 108 aa12.02□□□□□ -0.49
CTSA-211ENST00000606066 IGHV4-61A0A0C4DH41 118 aa12.02□□□□□ -0.49
CTSA-211ENST00000606066 H3BSH0 61 aa12.02□□□□□ -0.49
CTSA-211ENST00000606066 OGG1O15527 345 aa12.02□□□□□ -0.49
CTSA-211ENST00000606066 ZNF20P17024 532 aa12.02□□□□□ -0.49
CTSA-211ENST00000606066 EEF1B2P24534 225 aaKnown RBP12.02□□□□□ -0.49
CTSA-211ENST00000606066 BTG1P62324 171 aa12.02□□□□□ -0.49
CTSA-211ENST00000606066 ZNF154Q13106 437 aa12.02□□□□□ -0.49
CTSA-211ENST00000606066 MPPED2Q15777 294 aa12.02□□□□□ -0.49
CTSA-211ENST00000606066 FAM76BQ5HYJ3 339 aa12.02□□□□□ -0.49
CTSA-211ENST00000606066 AVPI1Q5T686 147 aa12.02□□□□□ -0.49
CTSA-211ENST00000606066 ZNF485Q8NCK3 441 aa12.02□□□□□ -0.49
CTSA-211ENST00000606066 OR13C3Q8NGS6 347 aa12.02□□□□□ -0.49
CTSA-211ENST00000606066 HPSE2Q8WWQ2 592 aa12.02□□□□□ -0.49
CTSA-211ENST00000606066 SMIM19Q96E16 107 aa12.02□□□□□ -0.49
CTSA-211ENST00000606066 PDCD1LG2Q9BQ51 273 aa12.02□□□□□ -0.49
CTSA-211ENST00000606066 CCDC90BQ9GZT6 254 aa12.02□□□□□ -0.49
CTSA-211ENST00000606066 PPP1R3EQ9H7J1 279 aa12.02□□□□□ -0.49
CTSA-211ENST00000606066 PAK1IP1Q9NWT1 392 aaPredicted RBP12.02□□□□□ -0.49
CTSA-211ENST00000606066 C1orf123Q9NWV4 160 aa12.02□□□□□ -0.49
CTSA-211ENST00000606066 ERVK-18Q9QC07 812 aa12.02□□□□□ -0.49
CTSA-211ENST00000606066 RNF7Q9UBF6 113 aa12.02□□□□□ -0.49
CTSA-211ENST00000606066 SLC7A11Q9UPY5 501 aa12.02□□□□□ -0.49
CTSA-211ENST00000606066 MXRA5Q9NR99 2828 aa12.01□□□□□ -0.49
CTSA-211ENST00000606066 hCG_1807616A0A1W2PRN6 198 aa12.01□□□□□ -0.49
CTSA-211ENST00000606066 ISPDA4D126 451 aa12.01□□□□□ -0.49
CTSA-211ENST00000606066 A6NIN4 97 aa12.01□□□□□ -0.49
CTSA-211ENST00000606066 ZNF732B4DXR9 585 aa12.01□□□□□ -0.49
CTSA-211ENST00000606066 FSTL3O95633 263 aa12.01□□□□□ -0.49
CTSA-211ENST00000606066 CYB5R3P00387 301 aaPredicted RBP12.01□□□□□ -0.49
CTSA-211ENST00000606066 THBS2P35442 1172 aa12.01□□□□□ -0.49
CTSA-211ENST00000606066 PMELP40967 661 aa12.01□□□□□ -0.49
CTSA-211ENST00000606066 GPM6AP51674 278 aa12.01□□□□□ -0.49
CTSA-211ENST00000606066 BDH1Q02338 343 aa12.01□□□□□ -0.49
CTSA-211ENST00000606066 CNN3Q15417 329 aaKnown RBP12.01□□□□□ -0.49
CTSA-211ENST00000606066 PRSS48Q7RTY5 328 aa12.01□□□□□ -0.49
CTSA-211ENST00000606066 MUC20Q8N307 709 aaPredicted RBP12.01□□□□□ -0.49
CTSA-211ENST00000606066 SPICQ8N5J4 248 aa12.01□□□□□ -0.49
CTSA-211ENST00000606066 MAPK1IP1LQ8NDC0 245 aa12.01□□□□□ -0.49
CTSA-211ENST00000606066 GPR148Q8TDV2 347 aa12.01□□□□□ -0.49
CTSA-211ENST00000606066 FGGYQ96C11 551 aa12.01□□□□□ -0.49
CTSA-211ENST00000606066 YTHDF1Q9BYJ9 559 aaKnown RBP12.01□□□□□ -0.49
CTSA-211ENST00000606066 CHST5Q9GZS9 411 aa12.01□□□□□ -0.49
CTSA-211ENST00000606066 TLNRD1Q9H1K6 362 aa12.01□□□□□ -0.49
CTSA-211ENST00000606066 NEK6Q9HC98 313 aa12.01□□□□□ -0.49
CTSA-211ENST00000606066 GPR173Q9NS66 373 aa12.01□□□□□ -0.49
CTSA-211ENST00000606066 DHDHQ9UQ10 334 aa12.01□□□□□ -0.49
CTSA-211ENST00000606066 ZNF281Q9Y2X9 895 aa12.01□□□□□ -0.49
CTSA-211ENST00000606066 NBEAL1Q6ZS30 2694 aa12□□□□□ -0.49
CTSA-211ENST00000606066 PPIAL4EA0A075B759 164 aa12□□□□□ -0.49
CTSA-211ENST00000606066 LRP5LA4QPB2 252 aa12□□□□□ -0.49
CTSA-211ENST00000606066 PPIAL4DF5H284 164 aa12□□□□□ -0.49
CTSA-211ENST00000606066 CDIPTO14735 213 aa12□□□□□ -0.49
CTSA-211ENST00000606066 MRPS14O60783 128 aaKnown RBP12□□□□□ -0.49
CTSA-211ENST00000606066 IGHV2-70P01814 119 aa12□□□□□ -0.49
CTSA-211ENST00000606066 OCM2P0CE71 109 aa12□□□□□ -0.49
CTSA-211ENST00000606066 OCMP0CE72 109 aaPredicted RBP12□□□□□ -0.49
CTSA-211ENST00000606066 PPIAL4FP0DN26 164 aa12□□□□□ -0.49
CTSA-211ENST00000606066 MDH2P40926 338 aaKnown RBP12□□□□□ -0.49
CTSA-211ENST00000606066 GZMKP49863 264 aa12□□□□□ -0.49
CTSA-211ENST00000606066 GABARAPL2P60520 117 aa12□□□□□ -0.49
CTSA-211ENST00000606066 ACSM1Q08AH1 577 aa12□□□□□ -0.49
CTSA-211ENST00000606066 SPHARQ15513 63 aa12□□□□□ -0.49
CTSA-211ENST00000606066 KCNJ8Q15842 424 aa12□□□□□ -0.49
CTSA-211ENST00000606066 TMEM249Q2WGJ8 235 aa12□□□□□ -0.49
CTSA-211ENST00000606066 TMEM155Q4W5P6 130 aa12□□□□□ -0.49
CTSA-211ENST00000606066 DMKNQ6E0U4 476 aaPredicted RBP12□□□□□ -0.49
CTSA-211ENST00000606066 XAF1Q6GPH4 301 aa12□□□□□ -0.49
CTSA-211ENST00000606066 WDR86Q86TI4 376 aa12□□□□□ -0.49
CTSA-211ENST00000606066 LRRC28Q86X40 367 aaPredicted RBP12□□□□□ -0.49
CTSA-211ENST00000606066 ZNF573Q86YE8 665 aa12□□□□□ -0.49
CTSA-211ENST00000606066 SERPINA12Q8IW75 414 aa12□□□□□ -0.49
CTSA-211ENST00000606066 OR51A4Q8NGJ6 313 aa12□□□□□ -0.49
CTSA-211ENST00000606066 CLDND2Q8NHS1 167 aa12□□□□□ -0.49
CTSA-211ENST00000606066 RPS4Y2Q8TD47 263 aa12□□□□□ -0.49
CTSA-211ENST00000606066 TSEN15Q8WW01 171 aaKnown RBP12□□□□□ -0.49
CTSA-211ENST00000606066 GHSRQ92847 366 aa12□□□□□ -0.49
CTSA-211ENST00000606066 RAB39BQ96DA2 213 aa12□□□□□ -0.49
CTSA-211ENST00000606066 GAL3ST1Q99999 423 aa12□□□□□ -0.49
CTSA-211ENST00000606066 NARFLQ9H6Q4 476 aa12□□□□□ -0.49
CTSA-211ENST00000606066 DCAF16Q9NXF7 216 aa12□□□□□ -0.49
CTSA-211ENST00000606066 UBAP1Q9NZ09 502 aa12□□□□□ -0.49
CTSA-211ENST00000606066 PPIAL4AQ9Y536 164 aa12□□□□□ -0.49
CTSA-211ENST00000606066 PLPP2O43688 288 aa11.99□□□□□ -0.49
CTSA-211ENST00000606066 LMX1BO60663 402 aa11.99□□□□□ -0.49
CTSA-211ENST00000606066 LALBAP00709 142 aa11.99□□□□□ -0.49
CTSA-211ENST00000606066 CD1AP06126 327 aa11.99□□□□□ -0.49
CTSA-211ENST00000606066 CD2P06729 351 aa11.99□□□□□ -0.49
CTSA-211ENST00000606066 PRKACBP22694 351 aa11.99□□□□□ -0.49
CTSA-211ENST00000606066 CPT2P23786 658 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms