RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 ZNF826PQ6ZT77 177 aa13.51□□□□□ -0.25
LSM4-206ENST00000600289 NLRC3Q7RTR2 1065 aa13.51□□□□□ -0.25
LSM4-206ENST00000600289 SYS1Q8N2H4 156 aa13.51□□□□□ -0.25
LSM4-206ENST00000600289 PRSS35Q8N3Z0 413 aa13.51□□□□□ -0.25
LSM4-206ENST00000600289 SETD9Q8NE22 299 aa13.51□□□□□ -0.25
LSM4-206ENST00000600289 OR5A2Q8NGI9 324 aa13.51□□□□□ -0.25
LSM4-206ENST00000600289 HIST1H2AAQ96QV6 131 aa13.51□□□□□ -0.25
LSM4-206ENST00000600289 TMPRSS13Q9BYE2 586 aa13.51□□□□□ -0.25
LSM4-206ENST00000600289 GNG8Q9UK08 70 aa13.51□□□□□ -0.25
LSM4-206ENST00000600289 HSPE1-MOB4S4R3N1 261 aa13.51□□□□□ -0.25
LSM4-206ENST00000600289 TENM1Q9UKZ4 2725 aa13.51□□□□□ -0.25
LSM4-206ENST00000600289 ARHGAP32A7KAX9 2087 aa13.51□□□□□ -0.25
LSM4-206ENST00000600289 hCG_1807616A0A1W2PRN6 198 aa13.5□□□□□ -0.25
LSM4-206ENST00000600289 H0YAE9 185 aa13.5□□□□□ -0.25
LSM4-206ENST00000600289 P2RY10O00398 339 aa13.5□□□□□ -0.25
LSM4-206ENST00000600289 ZNF205O95201 554 aa13.5□□□□□ -0.25
LSM4-206ENST00000600289 MUC1P15941 1255 aaPredicted RBP13.5□□□□□ -0.25
LSM4-206ENST00000600289 FAHP16930 419 aa13.5□□□□□ -0.25
LSM4-206ENST00000600289 NPY4RP50391 375 aa13.5□□□□□ -0.25
LSM4-206ENST00000600289 CCR9P51686 369 aa13.5□□□□□ -0.25
LSM4-206ENST00000600289 GNG3P63215 75 aa13.5□□□□□ -0.25
LSM4-206ENST00000600289 CSNK2BP67870 215 aa13.5□□□□□ -0.25
LSM4-206ENST00000600289 LCN2P80188 198 aa13.5□□□□□ -0.25
LSM4-206ENST00000600289 SRSF2Q01130 221 aaKnown RBP13.5□□□□□ -0.25
LSM4-206ENST00000600289 GALEQ14376 348 aa13.5□□□□□ -0.25
LSM4-206ENST00000600289 KLHL22Q53GT1 634 aa13.5□□□□□ -0.25
LSM4-206ENST00000600289 WDR38Q5JTN6 314 aa13.5□□□□□ -0.25
LSM4-206ENST00000600289 DCAF12L2Q5VW00 463 aa13.5□□□□□ -0.25
LSM4-206ENST00000600289 IL17RELQ6ZVW7 336 aa13.5□□□□□ -0.25
LSM4-206ENST00000600289 DHRSXQ8N5I4 330 aa13.5□□□□□ -0.25
LSM4-206ENST00000600289 OR8B3Q8NGG8 313 aa13.5□□□□□ -0.25
LSM4-206ENST00000600289 DACT3Q96B18 629 aaPredicted RBP13.5□□□□□ -0.25
LSM4-206ENST00000600289 C12orf43Q96C57 262 aaKnown RBP13.5□□□□□ -0.25
LSM4-206ENST00000600289 RNF170Q96K19 258 aa13.5□□□□□ -0.25
LSM4-206ENST00000600289 OR8B2Q96RD0 313 aa13.5□□□□□ -0.25
LSM4-206ENST00000600289 ZNF649Q9BS31 505 aa13.5□□□□□ -0.25
LSM4-206ENST00000600289 SSBP3Q9BWW4 388 aaPredicted RBP13.5□□□□□ -0.25
LSM4-206ENST00000600289 FGF20Q9NP95 211 aaPredicted RBP13.5□□□□□ -0.25
LSM4-206ENST00000600289 A0A1B0GVI7 797 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.49□□□□□ -0.25
LSM4-206ENST00000600289 CDIPTO14735 213 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 ISG15P05161 165 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 ZNF12P17014 697 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 EGR1P18146 543 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 CD80P33681 288 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 KIR3DL2P43630 455 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 PAX2Q02962 417 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 MRPL28Q13084 256 aaKnown RBP13.49□□□□□ -0.25
LSM4-206ENST00000600289 C11orf91Q3C1V1 193 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 CLVS2Q5SYC1 327 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 ZNF841Q6ZN19 808 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 ZNF771Q7L3S4 317 aaPredicted RBP13.49□□□□□ -0.25
LSM4-206ENST00000600289 SCCPDHQ8NBX0 429 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 OR52I1Q8NGK6 324 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 OR2G2Q8NGZ5 317 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 HAVCR2Q8TDQ0 301 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 LRRC29Q8WV35 223 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 C10orf35Q96D05 121 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 TECTBQ96PL2 329 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 ADI1Q9BV57 179 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 ALG8Q9BVK2 526 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 OR51I2Q9H344 312 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 KAAG1Q9UBP8 84 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 OR5V1Q9UGF6 321 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 MYRFQ9Y2G1 1151 aa13.49□□□□□ -0.25
LSM4-206ENST00000600289 IRGMA1A4Y4 181 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 ZNF732B4DXR9 585 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 C3orf80F5H4A9 247 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 TRAPPC2LH3BP13 241 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 SYT7O43581 403 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 NRASP01111 189 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 PITPNBP48739 271 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 OR12D2P58182 307 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 GNB2P62879 340 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 SLC34A1Q06495 639 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 CEP78Q5JTW2 689 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 TMEM244Q5VVB8 128 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 PLCXD3Q63HM9 321 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 FAHD2BQ6P2I3 314 aaPredicted RBP13.48□□□□□ -0.25
LSM4-206ENST00000600289 LYPD2Q6UXB3 125 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 C1orf229Q6ZS94 237 aaPredicted RBP13.48□□□□□ -0.25
LSM4-206ENST00000600289 C1QL2Q7Z5L3 287 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 FAM90A1Q86YD7 464 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 C19orf18Q8NEA5 215 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 CYGBQ8WWM9 190 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 PELI1Q96FA3 418 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 FAHD2AQ96GK7 314 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 VCXQ9H320 206 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 METTL17Q9H7H0 456 aaPredicted RBP13.48□□□□□ -0.25
LSM4-206ENST00000600289 AMBNQ9NP70 447 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 ERVK13-1Q9NX77 482 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 INSIG2Q9Y5U4 225 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 WNK2Q9Y3S1 2297 aa13.48□□□□□ -0.25
LSM4-206ENST00000600289 CLIC3O95833 236 aa13.47□□□□□ -0.25
LSM4-206ENST00000600289 FSHBP01225 129 aa13.47□□□□□ -0.25
LSM4-206ENST00000600289 RPSAP08865 295 aaKnown RBP13.47□□□□□ -0.25
LSM4-206ENST00000600289 SRP14P37108 136 aaKnown RBP13.47□□□□□ -0.25
LSM4-206ENST00000600289 CAPGP40121 348 aa13.47□□□□□ -0.25
LSM4-206ENST00000600289 GPM6AP51674 278 aa13.47□□□□□ -0.25
LSM4-206ENST00000600289 NANOS3P60323 173 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms