RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 TRGV5A0A0B4J1U4 118 aa12.56□□□□□ -0.4
VRK3-217ENST00000599538 ZNF724A8MTY0 619 aa12.56□□□□□ -0.4
VRK3-217ENST00000599538 RPL36A-HNRNPH2H7BZ11 118 aa12.56□□□□□ -0.4
VRK3-217ENST00000599538 PMP2P02689 132 aa12.56□□□□□ -0.4
VRK3-217ENST00000599538 UBBP0CG47 229 aa12.56□□□□□ -0.4
VRK3-217ENST00000599538 CCNOP22674 350 aa12.56□□□□□ -0.4
VRK3-217ENST00000599538 RRADP55042 308 aa12.56□□□□□ -0.4
VRK3-217ENST00000599538 GNG2P59768 71 aa12.56□□□□□ -0.4
VRK3-217ENST00000599538 LGALSLQ3ZCW2 172 aaPredicted RBP12.56□□□□□ -0.4
VRK3-217ENST00000599538 C4orf46Q504U0 113 aa12.56□□□□□ -0.4
VRK3-217ENST00000599538 DCAF12L2Q5VW00 463 aa12.56□□□□□ -0.4
VRK3-217ENST00000599538 SPICQ8N5J4 248 aa12.56□□□□□ -0.4
VRK3-217ENST00000599538 GON7Q9BXV9 100 aa12.56□□□□□ -0.4
VRK3-217ENST00000599538 ZNF107Q9UII5 783 aaPredicted RBP12.56□□□□□ -0.4
VRK3-217ENST00000599538 CEP250Q9BV73 2442 aa12.55□□□□□ -0.4
VRK3-217ENST00000599538 LRP3O75074 770 aa12.55□□□□□ -0.4
VRK3-217ENST00000599538 SCGNO76038 276 aa12.55□□□□□ -0.4
VRK3-217ENST00000599538 ACTL6AO96019 429 aa12.55□□□□□ -0.4
VRK3-217ENST00000599538 OR4E1P0C645 316 aa12.55□□□□□ -0.4
VRK3-217ENST00000599538 SSTR2P30874 369 aa12.55□□□□□ -0.4
VRK3-217ENST00000599538 OR56B1Q8NGI3 324 aa12.55□□□□□ -0.4
VRK3-217ENST00000599538 SLC25A21Q9BQT8 299 aaPredicted RBP12.55□□□□□ -0.4
VRK3-217ENST00000599538 URM1Q9BTM9 101 aaKnown RBP12.55□□□□□ -0.4
VRK3-217ENST00000599538 CST11Q9H112 138 aa12.55□□□□□ -0.4
VRK3-217ENST00000599538 ZDHHC11Q9H8X9 412 aa12.55□□□□□ -0.4
VRK3-217ENST00000599538 CRIM1Q9NZV1 1036 aa12.55□□□□□ -0.4
VRK3-217ENST00000599538 UPB1Q9UBR1 384 aa12.55□□□□□ -0.4
VRK3-217ENST00000599538 OR2AT4A6NND4 320 aa12.55□□□□□ -0.4
VRK3-217ENST00000599538 GSTP1P09211 210 aaKnown RBP12.55□□□□□ -0.4
VRK3-217ENST00000599538 TMEM225BP0DP42 221 aa12.55□□□□□ -0.4
VRK3-217ENST00000599538 BLVRBP30043 206 aaPredicted RBP12.55□□□□□ -0.4
VRK3-217ENST00000599538 MICBQ29980 383 aa12.55□□□□□ -0.4
VRK3-217ENST00000599538 NRN1LQ496H8 165 aa12.55□□□□□ -0.4
VRK3-217ENST00000599538 TMEM42Q69YG0 159 aa12.55□□□□□ -0.4
VRK3-217ENST00000599538 OR2AK2Q8NG84 335 aa12.55□□□□□ -0.4
VRK3-217ENST00000599538 MAFIPQ8WZ33 124 aa12.55□□□□□ -0.4
VRK3-217ENST00000599538 FBXW5Q969U6 566 aa12.55□□□□□ -0.4
VRK3-217ENST00000599538 C1QTNF5Q9BXJ0 243 aa12.55□□□□□ -0.4
VRK3-217ENST00000599538 FN3KRPQ9HA64 309 aa12.55□□□□□ -0.4
VRK3-217ENST00000599538 ZNF230Q9UIE0 474 aaPredicted RBP12.55□□□□□ -0.4
VRK3-217ENST00000599538 GVINP1Q7Z2Y8 2422 aa12.54□□□□□ -0.4
VRK3-217ENST00000599538 DHRS7CA6NNS2 312 aa12.54□□□□□ -0.4
VRK3-217ENST00000599538 PRR33A8MZF0 331 aa12.54□□□□□ -0.4
VRK3-217ENST00000599538 OR2A4O95047 310 aa12.54□□□□□ -0.4
VRK3-217ENST00000599538 NRASP01111 189 aa12.54□□□□□ -0.4
VRK3-217ENST00000599538 CD79AP11912 226 aa12.54□□□□□ -0.4
VRK3-217ENST00000599538 MCEMP1Q8IX19 187 aa12.54□□□□□ -0.4
VRK3-217ENST00000599538 ZNF100Q8IYN0 542 aa12.54□□□□□ -0.4
VRK3-217ENST00000599538 TMEM178AQ8NBL3 297 aa12.54□□□□□ -0.4
VRK3-217ENST00000599538 RADILQ96JH8 1075 aa12.54□□□□□ -0.4
VRK3-217ENST00000599538 GPR137Q96N19 417 aa12.54□□□□□ -0.4
VRK3-217ENST00000599538 OR2A7Q96R45 310 aa12.54□□□□□ -0.4
VRK3-217ENST00000599538 ALX4Q9H161 411 aaPredicted RBP12.54□□□□□ -0.4
VRK3-217ENST00000599538 RNF122Q9H9V4 155 aa12.54□□□□□ -0.4
VRK3-217ENST00000599538 SLC2A8Q9NY64 477 aa12.54□□□□□ -0.4
VRK3-217ENST00000599538 EIF3KQ9UBQ5 218 aaKnown RBP12.54□□□□□ -0.4
VRK3-217ENST00000599538 GHRLQ9UBU3 117 aa12.54□□□□□ -0.4
VRK3-217ENST00000599538 MGAQ8IWI9 3026 aa12.54□□□□□ -0.4
VRK3-217ENST00000599538 IGKV1-12A0A0C4DH73 117 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 C5orf49A4QMS7 147 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 DISC1C4P0D8 188 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 GOSR2O14653 212 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 IGKV1D-12P01611 117 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 MEF2DQ14814 521 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 RNPS1Q15287 305 aaKnown RBP12.53□□□□□ -0.4
VRK3-217ENST00000599538 OR8B8Q15620 311 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 COLCA1Q6ZS62 124 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 C6orf201Q7Z4U5 140 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 CCDC54Q8NEL0 328 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 OR4K15Q8NH41 348 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 PIGCQ92535 297 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 S100A13Q99584 98 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 PECRQ9BY49 303 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 TMEM165Q9HC07 324 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 ANAPC10Q9UM13 185 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 DSPP15924 2871 aaKnown RBP12.53□□□□□ -0.4
VRK3-217ENST00000599538 UBE2QL1A1L167 161 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 ZNF35P13682 527 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 GABRR1P24046 479 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 AGTR1P30556 359 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 ARFRP1Q13795 201 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 HIKESHIQ53FT3 197 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 CLVS2Q5SYC1 327 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 SIGIRRQ6IA17 410 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 SPSB1Q96BD6 273 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 TM2D1Q9BX74 207 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 PRDM14Q9GZV8 571 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 HEXA-AS1Q9H8Q6 139 aa12.53□□□□□ -0.4
VRK3-217ENST00000599538 MSTNO14793 375 aa12.52□□□□□ -0.4
VRK3-217ENST00000599538 HTR3BO95264 441 aa12.52□□□□□ -0.4
VRK3-217ENST00000599538 IL18BPO95998 194 aa12.52□□□□□ -0.4
VRK3-217ENST00000599538 NGFP01138 241 aa12.52□□□□□ -0.4
VRK3-217ENST00000599538 GIPP09681 153 aaPredicted RBP12.52□□□□□ -0.4
VRK3-217ENST00000599538 NUBP1P53384 320 aa12.52□□□□□ -0.4
VRK3-217ENST00000599538 RAB1AP62820 205 aa12.52□□□□□ -0.4
VRK3-217ENST00000599538 DHRS2Q13268 280 aa12.52□□□□□ -0.4
VRK3-217ENST00000599538 CAMK2BQ13554 666 aa12.52□□□□□ -0.4
VRK3-217ENST00000599538 HLXQ14774 488 aaPredicted RBP12.52□□□□□ -0.4
VRK3-217ENST00000599538 BATF2Q8N1L9 274 aa12.52□□□□□ -0.4
VRK3-217ENST00000599538 FTMTQ8N4E7 242 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms