RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 LRRC75BQ2VPJ9 315 aa17.26■□□□□ 0.35
PNKP-212ENST00000599454 SAMD5Q5TGI4 173 aa17.26■□□□□ 0.35
PNKP-212ENST00000599454 KCTD8Q6ZWB6 473 aa17.26■□□□□ 0.35
PNKP-212ENST00000599454 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.26■□□□□ 0.35
PNKP-212ENST00000599454 TIGD4Q8IY51 512 aa17.26■□□□□ 0.35
PNKP-212ENST00000599454 OR2T6Q8NHC8 308 aa17.26■□□□□ 0.35
PNKP-212ENST00000599454 RNF170Q96K19 258 aa17.26■□□□□ 0.35
PNKP-212ENST00000599454 MEGF9Q9H1U4 602 aa17.26■□□□□ 0.35
PNKP-212ENST00000599454 NDE1Q9NXR1 346 aa17.26■□□□□ 0.35
PNKP-212ENST00000599454 G3V4G9 280 aa17.25■□□□□ 0.35
PNKP-212ENST00000599454 H0YAE9 185 aa17.25■□□□□ 0.35
PNKP-212ENST00000599454 GLCEO94923 617 aa17.25■□□□□ 0.35
PNKP-212ENST00000599454 SOX14O95416 240 aa17.25■□□□□ 0.35
PNKP-212ENST00000599454 GLRA1P23415 457 aa17.25■□□□□ 0.35
PNKP-212ENST00000599454 ACKR3P25106 362 aa17.25■□□□□ 0.35
PNKP-212ENST00000599454 DCTDP32321 178 aa17.25■□□□□ 0.35
PNKP-212ENST00000599454 LIAT1Q6ZQX7 453 aa17.25■□□□□ 0.35
PNKP-212ENST00000599454 ZDHHC23Q8IYP9 409 aa17.25■□□□□ 0.35
PNKP-212ENST00000599454 PIGCQ92535 297 aa17.25■□□□□ 0.35
PNKP-212ENST00000599454 ITFG2Q969R8 447 aa17.25■□□□□ 0.35
PNKP-212ENST00000599454 HIST1H2AAQ96QV6 131 aa17.25■□□□□ 0.35
PNKP-212ENST00000599454 AMELYQ99218 206 aa17.25■□□□□ 0.35
PNKP-212ENST00000599454 MED4Q9NPJ6 270 aa17.25■□□□□ 0.35
PNKP-212ENST00000599454 ZNF446Q9NWS9 450 aa17.25■□□□□ 0.35
PNKP-212ENST00000599454 GABRA2P47869 451 aa17.24■□□□□ 0.35
PNKP-212ENST00000599454 MICAQ29983 383 aa17.24■□□□□ 0.35
PNKP-212ENST00000599454 HCP5Q6MZN7 132 aa17.24■□□□□ 0.35
PNKP-212ENST00000599454 C16orf89Q6UX73 402 aa17.24■□□□□ 0.35
PNKP-212ENST00000599454 ZNF454Q8N9F8 522 aa17.24■□□□□ 0.35
PNKP-212ENST00000599454 PPP1R35Q8TAP8 253 aa17.24■□□□□ 0.35
PNKP-212ENST00000599454 TEX47Q8TBZ9 253 aa17.24■□□□□ 0.35
PNKP-212ENST00000599454 HPSE2Q8WWQ2 592 aa17.24■□□□□ 0.35
PNKP-212ENST00000599454 PPP1R14AQ96A00 147 aa17.24■□□□□ 0.35
PNKP-212ENST00000599454 CLPTM1LQ96KA5 538 aa17.24■□□□□ 0.35
PNKP-212ENST00000599454 MAGIXQ9H6Y5 334 aa17.24■□□□□ 0.35
PNKP-212ENST00000599454 SIGLEC9Q9Y336 463 aa17.24■□□□□ 0.35
PNKP-212ENST00000599454 ANGPTL7O43827 346 aa17.23■□□□□ 0.35
PNKP-212ENST00000599454 LYNP07948 512 aa17.23■□□□□ 0.35
PNKP-212ENST00000599454 PAICSP22234 425 aaKnown RBP17.23■□□□□ 0.35
PNKP-212ENST00000599454 KRT74Q7RTS7 529 aa17.23■□□□□ 0.35
PNKP-212ENST00000599454 KLHDC1Q8N7A1 406 aa17.23■□□□□ 0.35
PNKP-212ENST00000599454 OTOSQ8NHW6 89 aa17.23■□□□□ 0.35
PNKP-212ENST00000599454 NPFFR1Q9GZQ6 430 aa17.23■□□□□ 0.35
PNKP-212ENST00000599454 NIPAL2Q9H841 368 aa17.23■□□□□ 0.35
PNKP-212ENST00000599454 REEP1Q9H902 201 aa17.23■□□□□ 0.35
PNKP-212ENST00000599454 ACTR3BQ9P1U1 418 aa17.23■□□□□ 0.35
PNKP-212ENST00000599454 ZNF222Q9UK12 451 aa17.23■□□□□ 0.35
PNKP-212ENST00000599454 DSCAML1Q8TD84 2053 aa17.23■□□□□ 0.35
PNKP-212ENST00000599454 IGKV1D-17A0A075B6S4 117 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 A0A1W2PPH5 198 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 FAM183AA6NL82 134 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 TFF1P04155 84 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 PSG2P11465 335 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 PSMA6P60900 246 aaKnown RBP17.22■□□□□ 0.35
PNKP-212ENST00000599454 GNG3P63215 75 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 LY6EQ16553 131 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 OR2T5Q6IEZ7 315 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 CRIP3Q6Q6R5 217 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 CD300LDQ6UXZ3 194 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 CYP2R1Q6VVX0 501 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 DEFB107AQ8IZN7 70 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 FAM185AQ8N0U4 392 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 TMEM185AQ8NFB2 350 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 OR2T29Q8NH02 315 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 OR5K1Q8NHB7 308 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 ZNF671Q8TAW3 534 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 C17orf50Q8WW18 174 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 OTULINQ96BN8 352 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 SDSLQ96GA7 329 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 AJUBAQ96IF1 538 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 FGF23Q9GZV9 251 aaPredicted RBP17.22■□□□□ 0.35
PNKP-212ENST00000599454 MED20Q9H944 212 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 TAGLN3Q9UI15 199 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 FOXJ3Q9UPW0 622 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 SAMHD1Q9Y3Z3 626 aaKnown RBP17.22■□□□□ 0.35
PNKP-212ENST00000599454 LRP12Q9Y561 859 aa17.22■□□□□ 0.35
PNKP-212ENST00000599454 PIN1P1O15428 100 aa17.21■□□□□ 0.35
PNKP-212ENST00000599454 SNX3O60493 162 aa17.21■□□□□ 0.35
PNKP-212ENST00000599454 GPM6AP51674 278 aa17.21■□□□□ 0.35
PNKP-212ENST00000599454 PPP1R8Q12972 351 aaKnown RBP17.21■□□□□ 0.35
PNKP-212ENST00000599454 GK3PQ14409 553 aa17.21■□□□□ 0.35
PNKP-212ENST00000599454 ZNRF1Q8ND25 227 aa17.21■□□□□ 0.35
PNKP-212ENST00000599454 FAM81AQ8TBF8 368 aa17.21■□□□□ 0.35
PNKP-212ENST00000599454 THEM6Q8WUY1 208 aa17.21■□□□□ 0.35
PNKP-212ENST00000599454 RORBQ92753 470 aa17.21■□□□□ 0.35
PNKP-212ENST00000599454 LYZL4Q96KX0 146 aa17.21■□□□□ 0.35
PNKP-212ENST00000599454 OR51I2Q9H344 312 aa17.21■□□□□ 0.35
PNKP-212ENST00000599454 HEXA-AS1Q9H8Q6 139 aa17.21■□□□□ 0.35
PNKP-212ENST00000599454 ELL3Q9HB65 397 aaPredicted RBP17.21■□□□□ 0.35
PNKP-212ENST00000599454 RASL12Q9NYN1 266 aa17.21■□□□□ 0.35
PNKP-212ENST00000599454 OR5B21A6NL26 309 aa17.2■□□□□ 0.34
PNKP-212ENST00000599454 RHBDL1O75783 438 aa17.2■□□□□ 0.34
PNKP-212ENST00000599454 ATP6V1B2P21281 511 aa17.2■□□□□ 0.34
PNKP-212ENST00000599454 MAP2K3P46734 347 aa17.2■□□□□ 0.34
PNKP-212ENST00000599454 FAM189A2Q15884 450 aa17.2■□□□□ 0.34
PNKP-212ENST00000599454 Q6ZPA2 131 aa17.2■□□□□ 0.34
PNKP-212ENST00000599454 OR8B12Q8NGG6 310 aa17.2■□□□□ 0.34
PNKP-212ENST00000599454 OR51V1Q9H2C8 321 aa17.2■□□□□ 0.34
PNKP-212ENST00000599454 MUC13Q9H3R2 512 aa17.2■□□□□ 0.34
PNKP-212ENST00000599454 VNN3Q9NY84 501 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms