RNA–Protein interactions for RNA: ENST00000598127.1

PAF1-207, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-207ENST00000598127 JAM3Q9BX67 310 aa17.41■□□□□ 0.38
PAF1-207ENST00000598127 METTL17Q9H7H0 456 aaPredicted RBP17.41■□□□□ 0.38
PAF1-207ENST00000598127 TRIM36Q9NQ86 728 aa17.41■□□□□ 0.38
PAF1-207ENST00000598127 FRRS1LQ9P0K9 344 aa17.41■□□□□ 0.38
PAF1-207ENST00000598127 TRAV38-1A0A0B4J264 116 aa17.4■□□□□ 0.38
PAF1-207ENST00000598127 H0YHG0 523 aa17.4■□□□□ 0.38
PAF1-207ENST00000598127 H0YJX3 145 aa17.4■□□□□ 0.38
PAF1-207ENST00000598127 CDIPTO14735 213 aa17.4■□□□□ 0.38
PAF1-207ENST00000598127 HTR1AP08908 422 aa17.4■□□□□ 0.38
PAF1-207ENST00000598127 GNAO1P09471 354 aa17.4■□□□□ 0.38
PAF1-207ENST00000598127 UBCP0CG48 685 aaKnown RBP17.4■□□□□ 0.38
PAF1-207ENST00000598127 HNF1AP20823 631 aa17.4■□□□□ 0.38
PAF1-207ENST00000598127 DCKP27707 260 aa17.4■□□□□ 0.38
PAF1-207ENST00000598127 GPM6AP51674 278 aa17.4■□□□□ 0.38
PAF1-207ENST00000598127 CCR9P51686 369 aa17.4■□□□□ 0.38
PAF1-207ENST00000598127 CEP78Q5JTW2 689 aa17.4■□□□□ 0.38
PAF1-207ENST00000598127 TMEM244Q5VVB8 128 aa17.4■□□□□ 0.38
PAF1-207ENST00000598127 SFRP4Q6FHJ7 346 aaPredicted RBP17.4■□□□□ 0.38
PAF1-207ENST00000598127 SCCPDHQ8NBX0 429 aa17.4■□□□□ 0.38
PAF1-207ENST00000598127 C19orf18Q8NEA5 215 aa17.4■□□□□ 0.38
PAF1-207ENST00000598127 OR10Z1Q8NGY1 313 aa17.4■□□□□ 0.38
PAF1-207ENST00000598127 LRRC29Q8WV35 223 aa17.4■□□□□ 0.38
PAF1-207ENST00000598127 TFAP2CQ92754 450 aa17.4■□□□□ 0.38
PAF1-207ENST00000598127 RPL3LQ92901 407 aaKnown RBP17.4■□□□□ 0.38
PAF1-207ENST00000598127 ISG20L2Q9H9L3 353 aaKnown RBP17.4■□□□□ 0.38
PAF1-207ENST00000598127 LRCH1Q9Y2L9 728 aa17.4■□□□□ 0.38
PAF1-207ENST00000598127 POLR3KQ9Y2Y1 108 aaPredicted RBP17.4■□□□□ 0.38
PAF1-207ENST00000598127 JMJD1CQ15652 2540 aa17.4■□□□□ 0.38
PAF1-207ENST00000598127 PPIAL4CA0A0B4J2A2 164 aa17.39■□□□□ 0.37
PAF1-207ENST00000598127 OOEPA6NGQ2 149 aa17.39■□□□□ 0.37
PAF1-207ENST00000598127 OR5B21A6NL26 309 aa17.39■□□□□ 0.37
PAF1-207ENST00000598127 ZNF732B4DXR9 585 aa17.39■□□□□ 0.37
PAF1-207ENST00000598127 NDUFA2O43678 99 aa17.39■□□□□ 0.37
PAF1-207ENST00000598127 ISG15P05161 165 aa17.39■□□□□ 0.37
PAF1-207ENST00000598127 RPS2P15880 293 aaKnown RBP17.39■□□□□ 0.37
PAF1-207ENST00000598127 ZNF12P17014 697 aa17.39■□□□□ 0.37
PAF1-207ENST00000598127 ZFP36P26651 326 aaKnown RBP17.39■□□□□ 0.37
PAF1-207ENST00000598127 CD80P33681 288 aa17.39■□□□□ 0.37
PAF1-207ENST00000598127 NANOS3P60323 173 aaKnown RBP17.39■□□□□ 0.37
PAF1-207ENST00000598127 SEC61A1P61619 476 aaKnown RBP17.39■□□□□ 0.37
PAF1-207ENST00000598127 LCN2P80188 198 aa17.39■□□□□ 0.37
PAF1-207ENST00000598127 HOXA4Q00056 320 aaPredicted RBP17.39■□□□□ 0.37
PAF1-207ENST00000598127 ESCO2Q56NI9 601 aa17.39■□□□□ 0.37
PAF1-207ENST00000598127 PLCXD3Q63HM9 321 aa17.39■□□□□ 0.37
PAF1-207ENST00000598127 NEIL1Q96FI4 390 aaPredicted RBP17.39■□□□□ 0.37
PAF1-207ENST00000598127 OR51I2Q9H344 312 aa17.39■□□□□ 0.37
PAF1-207ENST00000598127 A6NIN4 97 aa17.38■□□□□ 0.37
PAF1-207ENST00000598127 A8MXK9 166 aa17.38■□□□□ 0.37
PAF1-207ENST00000598127 C3orf80F5H4A9 247 aa17.38■□□□□ 0.37
PAF1-207ENST00000598127 TNFRSF13BO14836 293 aaPredicted RBP17.38■□□□□ 0.37
PAF1-207ENST00000598127 FAM157CP0CG43 387 aa17.38■□□□□ 0.37
PAF1-207ENST00000598127 LIMS3P0CW19 117 aa17.38■□□□□ 0.37
PAF1-207ENST00000598127 LIMS4P0CW20 117 aa17.38■□□□□ 0.37
PAF1-207ENST00000598127 GATA3P23771 443 aa17.38■□□□□ 0.37
PAF1-207ENST00000598127 MRPL28Q13084 256 aaKnown RBP17.38■□□□□ 0.37
PAF1-207ENST00000598127 ALKBH1Q13686 389 aaKnown RBP17.38■□□□□ 0.37
PAF1-207ENST00000598127 DMRTC1Q5HYR2 192 aa17.38■□□□□ 0.37
PAF1-207ENST00000598127 TEX36Q5VZQ5 186 aa17.38■□□□□ 0.37
PAF1-207ENST00000598127 FAHD2BQ6P2I3 314 aaPredicted RBP17.38■□□□□ 0.37
PAF1-207ENST00000598127 LYPD2Q6UXB3 125 aa17.38■□□□□ 0.37
PAF1-207ENST00000598127 NLRC3Q7RTR2 1065 aa17.38■□□□□ 0.37
PAF1-207ENST00000598127 RDH10Q8IZV5 341 aa17.38■□□□□ 0.37
PAF1-207ENST00000598127 OR8B3Q8NGG8 313 aa17.38■□□□□ 0.37
PAF1-207ENST00000598127 HAVCR2Q8TDQ0 301 aa17.38■□□□□ 0.37
PAF1-207ENST00000598127 FBLIM1Q8WUP2 373 aa17.38■□□□□ 0.37
PAF1-207ENST00000598127 C10orf35Q96D05 121 aa17.38■□□□□ 0.37
PAF1-207ENST00000598127 FAHD2AQ96GK7 314 aa17.38■□□□□ 0.37
PAF1-207ENST00000598127 OR8B2Q96RD0 313 aa17.38■□□□□ 0.37
PAF1-207ENST00000598127 PLEKHA1Q9HB21 404 aa17.38■□□□□ 0.37
PAF1-207ENST00000598127 LOC107986453A0A1B0GWG9 222 aa17.37■□□□□ 0.37
PAF1-207ENST00000598127 OR4C45A6NMZ5 311 aa17.37■□□□□ 0.37
PAF1-207ENST00000598127 SRRM5B3KS81 715 aa17.37■□□□□ 0.37
PAF1-207ENST00000598127 MUC1P15941 1255 aaPredicted RBP17.37■□□□□ 0.37
PAF1-207ENST00000598127 EGR1P18146 543 aa17.37■□□□□ 0.37
PAF1-207ENST00000598127 DCAF12L2Q5VW00 463 aa17.37■□□□□ 0.37
PAF1-207ENST00000598127 IL17RELQ6ZVW7 336 aa17.37■□□□□ 0.37
PAF1-207ENST00000598127 SSBP3Q9BWW4 388 aaPredicted RBP17.37■□□□□ 0.37
PAF1-207ENST00000598127 GPR173Q9NS66 373 aa17.37■□□□□ 0.37
PAF1-207ENST00000598127 DIMT1Q9UNQ2 313 aaKnown RBP17.37■□□□□ 0.37
PAF1-207ENST00000598127 SVEP1Q4LDE5 3571 aa17.37■□□□□ 0.37
PAF1-207ENST00000598127 A0A0G2JMP0 313 aa17.36■□□□□ 0.37
PAF1-207ENST00000598127 A0A0X1KG70 313 aa17.36■□□□□ 0.37
PAF1-207ENST00000598127 KIAA1324LA8MWY0 1029 aaPredicted RBP17.36■□□□□ 0.37
PAF1-207ENST00000598127 H3BSH0 61 aa17.36■□□□□ 0.37
PAF1-207ENST00000598127 J3QLI3 93 aa17.36■□□□□ 0.37
PAF1-207ENST00000598127 PHF1O43189 567 aaPredicted RBP17.36■□□□□ 0.37
PAF1-207ENST00000598127 ETV1P50549 477 aa17.36■□□□□ 0.37
PAF1-207ENST00000598127 GBX2P52951 348 aaPredicted RBP17.36■□□□□ 0.37
PAF1-207ENST00000598127 GNB2P62879 340 aa17.36■□□□□ 0.37
PAF1-207ENST00000598127 MICBQ29980 383 aa17.36■□□□□ 0.37
PAF1-207ENST00000598127 LAIR2Q6ISS4 152 aa17.36■□□□□ 0.37
PAF1-207ENST00000598127 FAM90A1Q86YD7 464 aa17.36■□□□□ 0.37
PAF1-207ENST00000598127 OR4M2Q8NGB6 313 aa17.36■□□□□ 0.37
PAF1-207ENST00000598127 ZNF671Q8TAW3 534 aa17.36■□□□□ 0.37
PAF1-207ENST00000598127 GGHQ92820 318 aa17.36■□□□□ 0.37
PAF1-207ENST00000598127 TMEM80Q96HE8 168 aa17.36■□□□□ 0.37
PAF1-207ENST00000598127 VCX3BQ9H321 246 aa17.36■□□□□ 0.37
PAF1-207ENST00000598127 PLCXD1Q9NUJ7 323 aa17.36■□□□□ 0.37
PAF1-207ENST00000598127 CAB39Q9Y376 341 aaPredicted RBP17.36■□□□□ 0.37
PAF1-207ENST00000598127 ANKRD61A6NGH8 418 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms