RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 MALSU1Q96EH3 234 aa8.14□□□□□ -1.11
TRIM28-210ENST00000597618 HSH2DQ96JZ2 352 aa8.14□□□□□ -1.11
TRIM28-210ENST00000597618 MCRIP2Q9BUT9 160 aaKnown RBP8.14□□□□□ -1.11
TRIM28-210ENST00000597618 OR52D1Q9H346 318 aa8.14□□□□□ -1.11
TRIM28-210ENST00000597618 SP140LQ9H930 580 aa8.14□□□□□ -1.11
TRIM28-210ENST00000597618 TMBIM4Q9HC24 238 aa8.14□□□□□ -1.11
TRIM28-210ENST00000597618 CENPMQ9NSP4 180 aa8.14□□□□□ -1.11
TRIM28-210ENST00000597618 ZNF222Q9UK12 451 aa8.14□□□□□ -1.11
TRIM28-210ENST00000597618 RHBDD3Q9Y3P4 386 aa8.14□□□□□ -1.11
TRIM28-210ENST00000597618 MPC1Q9Y5U8 109 aa8.14□□□□□ -1.11
TRIM28-210ENST00000597618 H3BUI4 141 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 RHBDL1O75783 438 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 ZFPL1O95159 310 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 CHRM2P08172 466 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 SPARCP09486 303 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 AZGP1P25311 298 aaKnown RBP8.13□□□□□ -1.11
TRIM28-210ENST00000597618 PYCR1P32322 319 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 SLC15A1P46059 708 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 CX3CR1P49238 355 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 GRB2P62993 217 aaKnown RBP8.13□□□□□ -1.11
TRIM28-210ENST00000597618 SEC23BQ15437 767 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 SSX2Q16385 188 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 FAM76BQ5HYJ3 339 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 UNQ9370/PRO34162Q6UXP9 181 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 ZNF782Q6ZMW2 699 aaPredicted RBP8.13□□□□□ -1.11
TRIM28-210ENST00000597618 KCTD8Q6ZWB6 473 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 C11orf42Q8N5U0 333 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 OR52H1Q8NGJ2 320 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 OR2T4Q8NH00 348 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 DYDC1Q8WWB3 177 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 OR5P3Q8WZ94 311 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 SGK3Q96BR1 496 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 SDSLQ96GA7 329 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 SIKE1Q9BRV8 207 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 RGCCQ9H4X1 137 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 PPP1R3EQ9H7J1 279 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 MRGBPQ9NV56 204 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 GID8Q9NWU2 228 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 RAB21Q9UL25 225 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 AP3M1Q9Y2T2 418 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 FAM32AQ9Y421 112 aaKnown RBP8.13□□□□□ -1.11
TRIM28-210ENST00000597618 COMMD3-BMI1R4GMX3 469 aa8.13□□□□□ -1.11
TRIM28-210ENST00000597618 TRBV4-1A0A0J9YWV2 114 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 TVP23AA6NH52 213 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 ODF3BA8MYP8 253 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 CXCR6O00574 342 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 SERPINA1P01009 418 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 APOC1P02654 83 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 ARG1P05089 322 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 PSG2P11465 335 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 PSKH1P11801 424 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 HSD11B1P28845 292 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 DCTDP32321 178 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 ENTPD1P49961 510 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.12□□□□□ -1.11
TRIM28-210ENST00000597618 PRDX4Q13162 271 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 MAPRE2Q15555 327 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 GFOD2Q3B7J2 385 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 KLHL12Q53G59 568 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 CASC10Q5T4H9 136 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 TMEM200BQ69YZ2 307 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 THAP5Q7Z6K1 395 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 PIGWQ7Z7B1 504 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 MRPL41Q8IXM3 137 aaKnown RBP8.12□□□□□ -1.11
TRIM28-210ENST00000597618 OR51D1Q8NGF3 324 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 OR13D1Q8NGV5 346 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 MUC7Q8TAX7 377 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 OR10A2Q9H208 303 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 CD300AQ9UGN4 299 aa8.12□□□□□ -1.11
TRIM28-210ENST00000597618 A0A0G2JND7 137 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 ZNF850A8MQ14 1090 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 SLC1A7O00341 560 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 GSTA4O15217 222 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 CST4P01036 141 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 CCDC159P0C7I6 412 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 CCL3L1P16619 93 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 RHCEP18577 417 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 OR12D2P58182 307 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 DGCR2P98153 550 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 SLC35F1Q5T1Q4 408 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 ZNF626Q68DY1 528 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 LYPD4Q6UWN0 246 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 FAM57BQ71RH2 274 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 PRSS45Q7RTY3 260 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 C16orf82Q7Z2V1 217 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 ARPINQ7Z6K5 226 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 CALHM1Q8IU99 346 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 ZDHHC23Q8IYP9 409 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 ZNF561Q8N587 486 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 FAM86B1Q8N7N1 296 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 OR52J3Q8NH60 311 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 HPSE2Q8WWQ2 592 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 AKR1E2Q96JD6 320 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 RNF170Q96K19 258 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 DHRS1Q96LJ7 313 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 C1orf21Q9H246 121 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 YY1AP1Q9H869 796 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 NDUFAF4Q9P032 175 aa8.11□□□□□ -1.11
TRIM28-210ENST00000597618 DHRS12A0PJE2 317 aa8.1□□□□□ -1.11
TRIM28-210ENST00000597618 H0YHG0 523 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms