RNA–Protein interactions for RNA: ENST00000597172.5

TRIM28-208, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-208ENST00000597172 VHLLQ6RSH7 139 aa8.04□□□□□ -1.12
TRIM28-208ENST00000597172 LRRTM1Q86UE6 522 aa8.04□□□□□ -1.12
TRIM28-208ENST00000597172 SERPINA12Q8IW75 414 aa8.04□□□□□ -1.12
TRIM28-208ENST00000597172 ZNF420Q8TAQ5 688 aaPredicted RBP8.04□□□□□ -1.12
TRIM28-208ENST00000597172 SYNPRQ8TBG9 265 aa8.04□□□□□ -1.12
TRIM28-208ENST00000597172 RAB2BQ8WUD1 216 aa8.04□□□□□ -1.12
TRIM28-208ENST00000597172 ITFG2Q969R8 447 aa8.04□□□□□ -1.12
TRIM28-208ENST00000597172 C12orf43Q96C57 262 aaKnown RBP8.04□□□□□ -1.12
TRIM28-208ENST00000597172 SLC30A2Q9BRI3 323 aa8.04□□□□□ -1.12
TRIM28-208ENST00000597172 REG4Q9BYZ8 158 aa8.04□□□□□ -1.12
TRIM28-208ENST00000597172 MRPL37Q9BZE1 423 aaKnown RBP8.04□□□□□ -1.12
TRIM28-208ENST00000597172 CA10Q9NS85 328 aa8.04□□□□□ -1.12
TRIM28-208ENST00000597172 TAS2R4Q9NYW5 299 aa8.04□□□□□ -1.12
TRIM28-208ENST00000597172 MYEF2Q9P2K5 600 aaKnown RBP8.04□□□□□ -1.12
TRIM28-208ENST00000597172 PURGQ9UJV8 347 aaKnown RBP8.04□□□□□ -1.12
TRIM28-208ENST00000597172 RNF115Q9Y4L5 304 aa8.04□□□□□ -1.12
TRIM28-208ENST00000597172 VWFP04275 2813 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 IGLV3-9A0A075B6K5 115 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 TRAV1-2A0A0B4J238 106 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 CCDC160A6NGH7 325 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 IQCF6A8MYZ5 107 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 ZNF701M0R085 212 aaPredicted RBP8.03□□□□□ -1.12
TRIM28-208ENST00000597172 GMDSO60547 372 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 CST4P01036 141 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 IGHV3-13P01766 116 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 OR4A8P0C604 315 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 CLEC2LP0C7M8 214 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 CD37P11049 281 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 MAPK3P27361 379 aaPredicted RBP8.03□□□□□ -1.12
TRIM28-208ENST00000597172 GCH1P30793 250 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 SDC2P34741 201 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 RPS19P39019 145 aaKnown RBP8.03□□□□□ -1.12
TRIM28-208ENST00000597172 ADIPOQQ15848 244 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 MST1LQ2TV78 715 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 ZNF672Q499Z4 452 aaPredicted RBP8.03□□□□□ -1.12
TRIM28-208ENST00000597172 HSD17B12Q53GQ0 312 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 ZBTB37Q5TC79 503 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 CRIP3Q6Q6R5 217 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 Q6ZR03 302 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 RNF144BQ7Z419 303 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 NR2C2APQ86WQ0 139 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 OR5AS1Q8N127 324 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 BHLHE23Q8NDY6 225 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 OR51A2Q8NGJ7 313 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 NDNFQ8TB73 568 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 MRPL24Q96A35 216 aaKnown RBP8.03□□□□□ -1.12
TRIM28-208ENST00000597172 C10orf35Q96D05 121 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 KCTD7Q96MP8 289 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 GFI1Q99684 422 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 BCL7BQ9BQE9 202 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 FAM192AQ9GZU8 254 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 FGF23Q9GZV9 251 aaPredicted RBP8.03□□□□□ -1.12
TRIM28-208ENST00000597172 ZCCHC4Q9H5U6 513 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 ZNF442Q9H7R0 627 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 UBTD1Q9HAC8 227 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 GPR173Q9NS66 373 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 RSL24D1Q9UHA3 163 aaKnown RBP8.03□□□□□ -1.12
TRIM28-208ENST00000597172 DUSP13Q9UII6 198 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 FOXJ3Q9UPW0 622 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 GSTK1Q9Y2Q3 226 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 CMAHPQ9Y471 501 aa8.03□□□□□ -1.12
TRIM28-208ENST00000597172 ZNF816-ZNF321PA0A0X1KG74 233 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 A0A1B0GWJ7 208 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 ZNF850A8MQ14 1090 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 ARL6IP5O75915 188 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 ALX3O95076 343 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 CDRT1O95170 752 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 NRASP01111 189 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 MAS1P04201 325 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 CD2P06729 351 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 SELEP16581 610 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 ZNF20P17024 532 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 FSTP19883 344 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 GNALP38405 381 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 MTNR1BP49286 362 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 MMP15P51511 669 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 RPS23P62266 143 aaKnown RBP8.02□□□□□ -1.13
TRIM28-208ENST00000597172 CLVS2Q5SYC1 327 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 UTS2BQ765I0 119 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 LYPD6Q86Y78 171 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 CSNK2A3Q8NEV1 391 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 OR8G5Q8NG78 346 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 OR1M1Q8NGA1 313 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 OR5D14Q8NGL3 314 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 UBASH3BQ8TF42 649 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 PP6455Q8WZ26 134 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 PIGCQ92535 297 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 GTF3AQ92664 365 aaKnown RBP8.02□□□□□ -1.13
TRIM28-208ENST00000597172 THRSPQ92748 146 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 SYT3Q9BQG1 590 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 CHST5Q9GZS9 411 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 SNTG1Q9NSN8 517 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 CISD1Q9NZ45 108 aaKnown RBP8.02□□□□□ -1.13
TRIM28-208ENST00000597172 MRPL15Q9P015 296 aaKnown RBP8.02□□□□□ -1.13
TRIM28-208ENST00000597172 TAAR3PQ9P1P4 343 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 LPAR3Q9UBY5 353 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 GPR160Q9UJ42 338 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 POU2F3Q9UKI9 436 aa8.02□□□□□ -1.13
TRIM28-208ENST00000597172 AK6Q9Y3D8 172 aaKnown RBP8.02□□□□□ -1.13
TRIM28-208ENST00000597172 HEATR1Q9H583 2144 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms