RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 OR5A2Q8NGI9 324 aa17.57■□□□□ 0.4
PNKP-209ENST00000596726 APH1BQ8WW43 257 aa17.57■□□□□ 0.4
PNKP-209ENST00000596726 RPL3LQ92901 407 aaKnown RBP17.57■□□□□ 0.4
PNKP-209ENST00000596726 C8orf4Q9NR00 106 aa17.57■□□□□ 0.4
PNKP-209ENST00000596726 ACOXLQ9NUZ1 547 aa17.57■□□□□ 0.4
PNKP-209ENST00000596726 CTSZQ9UBR2 303 aa17.57■□□□□ 0.4
PNKP-209ENST00000596726 OR5V1Q9UGF6 321 aa17.57■□□□□ 0.4
PNKP-209ENST00000596726 METRNQ9UJH8 293 aa17.57■□□□□ 0.4
PNKP-209ENST00000596726 DAPL1A0PJW8 107 aa17.56■□□□□ 0.4
PNKP-209ENST00000596726 FSHBP01225 129 aa17.56■□□□□ 0.4
PNKP-209ENST00000596726 MUC1P15941 1255 aaPredicted RBP17.56■□□□□ 0.4
PNKP-209ENST00000596726 GPM6AP51674 278 aa17.56■□□□□ 0.4
PNKP-209ENST00000596726 LRRC36Q1X8D7 754 aa17.56■□□□□ 0.4
PNKP-209ENST00000596726 WDR38Q5JTN6 314 aa17.56■□□□□ 0.4
PNKP-209ENST00000596726 CEP78Q5JTW2 689 aa17.56■□□□□ 0.4
PNKP-209ENST00000596726 KCTD8Q6ZWB6 473 aa17.56■□□□□ 0.4
PNKP-209ENST00000596726 MOB3CQ70IA8 216 aa17.56■□□□□ 0.4
PNKP-209ENST00000596726 PRSS35Q8N3Z0 413 aa17.56■□□□□ 0.4
PNKP-209ENST00000596726 PACRGLQ8N7B6 248 aa17.56■□□□□ 0.4
PNKP-209ENST00000596726 ZNF555Q8NEP9 628 aa17.56■□□□□ 0.4
PNKP-209ENST00000596726 OR51I2Q9H344 312 aa17.56■□□□□ 0.4
PNKP-209ENST00000596726 MRPS18AQ9NVS2 196 aaKnown RBP17.56■□□□□ 0.4
PNKP-209ENST00000596726 CLN8Q9UBY8 286 aa17.56■□□□□ 0.4
PNKP-209ENST00000596726 GNG8Q9UK08 70 aa17.56■□□□□ 0.4
PNKP-209ENST00000596726 COL6A5A8TX70 2615 aa17.56■□□□□ 0.4
PNKP-209ENST00000596726 IGHV3OR15-7A0A075B7D8 119 aa17.55■□□□□ 0.4
PNKP-209ENST00000596726 OR5B21A6NL26 309 aa17.55■□□□□ 0.4
PNKP-209ENST00000596726 ZNF732B4DXR9 585 aa17.55■□□□□ 0.4
PNKP-209ENST00000596726 NRASP01111 189 aa17.55■□□□□ 0.4
PNKP-209ENST00000596726 GYPAP02724 150 aa17.55■□□□□ 0.4
PNKP-209ENST00000596726 ADRA2CP18825 462 aa17.55■□□□□ 0.4
PNKP-209ENST00000596726 PEX2P28328 305 aa17.55■□□□□ 0.4
PNKP-209ENST00000596726 NPY4RP50391 375 aa17.55■□□□□ 0.4
PNKP-209ENST00000596726 GABPB1Q06547 395 aaPredicted RBP17.55■□□□□ 0.4
PNKP-209ENST00000596726 PAX8Q06710 450 aa17.55■□□□□ 0.4
PNKP-209ENST00000596726 FDX2Q6P4F2 183 aa17.55■□□□□ 0.4
PNKP-209ENST00000596726 FAM220AQ7Z4H9 259 aa17.55■□□□□ 0.4
PNKP-209ENST00000596726 RAB40AQ8WXH6 277 aa17.55■□□□□ 0.4
PNKP-209ENST00000596726 KAAG1Q9UBP8 84 aa17.55■□□□□ 0.4
PNKP-209ENST00000596726 IGHV2-70DA0A0C4DH43 119 aa17.54■□□□□ 0.4
PNKP-209ENST00000596726 ADAM20O43506 726 aa17.54■□□□□ 0.4
PNKP-209ENST00000596726 WBP4O75554 376 aaKnown RBP17.54■□□□□ 0.4
PNKP-209ENST00000596726 IGHA1P01876 353 aa17.54■□□□□ 0.4
PNKP-209ENST00000596726 KIR3DL2P43630 455 aa17.54■□□□□ 0.4
PNKP-209ENST00000596726 OR12D2P58182 307 aa17.54■□□□□ 0.4
PNKP-209ENST00000596726 MICBQ29980 383 aa17.54■□□□□ 0.4
PNKP-209ENST00000596726 DMRTC1Q5HYR2 192 aa17.54■□□□□ 0.4
PNKP-209ENST00000596726 CLVS2Q5SYC1 327 aa17.54■□□□□ 0.4
PNKP-209ENST00000596726 ZNF691Q5VV52 312 aa17.54■□□□□ 0.4
PNKP-209ENST00000596726 PLCXD3Q63HM9 321 aa17.54■□□□□ 0.4
PNKP-209ENST00000596726 CCDC54Q8NEL0 328 aa17.54■□□□□ 0.4
PNKP-209ENST00000596726 NANPQ8TBE9 248 aa17.54■□□□□ 0.4
PNKP-209ENST00000596726 C12orf43Q96C57 262 aaKnown RBP17.54■□□□□ 0.4
PNKP-209ENST00000596726 SEH1LQ96EE3 360 aa17.54■□□□□ 0.4
PNKP-209ENST00000596726 ZNF649Q9BS31 505 aa17.54■□□□□ 0.4
PNKP-209ENST00000596726 AMBNQ9NP70 447 aa17.54■□□□□ 0.4
PNKP-209ENST00000596726 ERVK-18Q9QC07 812 aa17.54■□□□□ 0.4
PNKP-209ENST00000596726 MYRFQ9Y2G1 1151 aa17.54■□□□□ 0.4
PNKP-209ENST00000596726 KIR2DS1A0A191URI9 304 aa17.53■□□□□ 0.4
PNKP-209ENST00000596726 A0A1B0GVI7 797 aa17.53■□□□□ 0.4
PNKP-209ENST00000596726 CASQ2O14958 399 aaPredicted RBP17.53■□□□□ 0.4
PNKP-209ENST00000596726 SYT7O43581 403 aa17.53■□□□□ 0.4
PNKP-209ENST00000596726 FCN3O75636 299 aa17.53■□□□□ 0.4
PNKP-209ENST00000596726 RAB40BQ12829 278 aa17.53■□□□□ 0.4
PNKP-209ENST00000596726 ODF4Q2M2E3 257 aa17.53■□□□□ 0.4
PNKP-209ENST00000596726 OGFRL1Q5TC84 451 aaPredicted RBP17.53■□□□□ 0.4
PNKP-209ENST00000596726 EGFL6Q8IUX8 553 aa17.53■□□□□ 0.4
PNKP-209ENST00000596726 OR2G2Q8NGZ5 317 aa17.53■□□□□ 0.4
PNKP-209ENST00000596726 SMURF1Q9HCE7 757 aa17.53■□□□□ 0.4
PNKP-209ENST00000596726 RPL36Q9Y3U8 105 aaKnown RBP17.53■□□□□ 0.4
PNKP-209ENST00000596726 AUP1Q9Y679 476 aa17.53■□□□□ 0.4
PNKP-209ENST00000596726 A6NIN4 97 aa17.52■□□□□ 0.4
PNKP-209ENST00000596726 RHBDL1O75783 438 aa17.52■□□□□ 0.4
PNKP-209ENST00000596726 FADS2O95864 444 aaKnown RBP17.52■□□□□ 0.4
PNKP-209ENST00000596726 AMY2BP19961 511 aa17.52■□□□□ 0.4
PNKP-209ENST00000596726 ELF3P78545 371 aaPredicted RBP17.52■□□□□ 0.4
PNKP-209ENST00000596726 ADARB1P78563 741 aaKnown RBP17.52■□□□□ 0.4
PNKP-209ENST00000596726 SCGB2A2Q13296 93 aa17.52■□□□□ 0.4
PNKP-209ENST00000596726 GALEQ14376 348 aa17.52■□□□□ 0.4
PNKP-209ENST00000596726 TTC23Q5W5X9 447 aa17.52■□□□□ 0.4
PNKP-209ENST00000596726 LHFPL3Q86UP9 236 aa17.52■□□□□ 0.4
PNKP-209ENST00000596726 AQP3Q92482 292 aa17.52■□□□□ 0.4
PNKP-209ENST00000596726 NUDT16L1Q9BRJ7 211 aaKnown RBP17.52■□□□□ 0.4
PNKP-209ENST00000596726 MRI1Q9BV20 369 aa17.52■□□□□ 0.4
PNKP-209ENST00000596726 WDR13Q9H1Z4 485 aa17.52■□□□□ 0.4
PNKP-209ENST00000596726 INPP5EQ9NRR6 644 aa17.52■□□□□ 0.4
PNKP-209ENST00000596726 GPR173Q9NS66 373 aa17.52■□□□□ 0.4
PNKP-209ENST00000596726 FRRS1LQ9P0K9 344 aa17.52■□□□□ 0.4
PNKP-209ENST00000596726 C22orf46C9J442 243 aa17.51■□□□□ 0.39
PNKP-209ENST00000596726 J3QLW9 94 aa17.51■□□□□ 0.39
PNKP-209ENST00000596726 AKR7A2O43488 359 aa17.51■□□□□ 0.39
PNKP-209ENST00000596726 CLIC3O95833 236 aa17.51■□□□□ 0.39
PNKP-209ENST00000596726 UBCP0CG48 685 aaKnown RBP17.51■□□□□ 0.39
PNKP-209ENST00000596726 PPIAL4GP0DN37 164 aa17.51■□□□□ 0.39
PNKP-209ENST00000596726 ZNF19P17023 458 aa17.51■□□□□ 0.39
PNKP-209ENST00000596726 EPHA1P21709 976 aa17.51■□□□□ 0.39
PNKP-209ENST00000596726 CCR9P51686 369 aa17.51■□□□□ 0.39
PNKP-209ENST00000596726 NANOS3P60323 173 aaKnown RBP17.51■□□□□ 0.39
PNKP-209ENST00000596726 ACTA2P62736 377 aa17.51■□□□□ 0.39
PNKP-209ENST00000596726 ACTG2P63267 376 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms