RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 FAHD2BQ6P2I3 314 aaPredicted RBP9.3□□□□□ -0.92
VRK3-210ENST00000596121 FDX2Q6P4F2 183 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 DUX4L9Q6RFH8 374 aaPredicted RBP9.3□□□□□ -0.92
VRK3-210ENST00000596121 FAM90A1Q86YD7 464 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 C1orf87Q8N0U7 546 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 MUC20Q8N307 709 aaPredicted RBP9.3□□□□□ -0.92
VRK3-210ENST00000596121 OR10AC1Q8NH08 325 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 LRRC29Q8WV35 223 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 DACT3Q96B18 629 aaPredicted RBP9.3□□□□□ -0.92
VRK3-210ENST00000596121 FAHD2AQ96GK7 314 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 C4orf36Q96KX1 117 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 Q96MT0 163 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 ALG8Q9BVK2 526 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 RTL8AQ9BWD3 113 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 WDR13Q9H1Z4 485 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 OR51I2Q9H344 312 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 RNPEPL1Q9HAU8 725 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 FGF20Q9NP95 211 aaPredicted RBP9.3□□□□□ -0.92
VRK3-210ENST00000596121 C8orf4Q9NR00 106 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 DUX4Q9UBX2 424 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 POLR3KQ9Y2Y1 108 aaPredicted RBP9.3□□□□□ -0.92
VRK3-210ENST00000596121 RPL36Q9Y3U8 105 aaKnown RBP9.3□□□□□ -0.92
VRK3-210ENST00000596121 FBN1P35555 2871 aaKnown RBP9.3□□□□□ -0.92
VRK3-210ENST00000596121 LOC107986453A0A1B0GWG9 222 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 hCG_1807616A0A1W2PRN6 198 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 OOEPA6NGQ2 149 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 ANXA2P2A6NMY6 339 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 SNTNA6NMZ2 147 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 OR4C45A6NMZ5 311 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 A8MXK9 166 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 FADS2O95864 444 aaKnown RBP9.29□□□□□ -0.92
VRK3-210ENST00000596121 GYPAP02724 150 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 FAM157CP0CG43 387 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 RPS2P15880 293 aaKnown RBP9.29□□□□□ -0.92
VRK3-210ENST00000596121 CFHR2P36980 270 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 ETV1P50549 477 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 GMFBP60983 142 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 MZT1Q08AG7 82 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 SNCBQ16143 134 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 CEACAM21Q3KPI0 293 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 KRTAP21-3Q3LHN1 58 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 ZBTB37Q5TC79 503 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 TEX36Q5VZQ5 186 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 XAF1Q6GPH4 301 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 DCDC5Q6ZRR9 648 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 KCTD8Q6ZWB6 473 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 DOK3Q7L591 496 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 KCTD20Q7Z5Y7 419 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 THAP5Q7Z6K1 395 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 FGFRL1Q8N441 504 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 FTMTQ8N4E7 242 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 FBLIM1Q8WUP2 373 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 TFAP2CQ92754 450 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 RASSF4Q9H2L5 321 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 SMURF1Q9HCE7 757 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 MIOXQ9UGB7 285 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 ENPP5Q9UJA9 477 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 PCDHGB1Q9Y5G3 927 aa9.29□□□□□ -0.92
VRK3-210ENST00000596121 DNHD1Q96M86 4753 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 IGKV1-27A0A075B6S5 117 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 LOC105371242A0A075B767 164 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 PQLC2LA1A4F0 135 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 TMEM210A6NLX4 147 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 SRRM5B3KS81 715 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 H0YAE9 185 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 AKR7A2O43488 359 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 SYT7O43581 403 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 MTRF1O75570 445 aaKnown RBP9.28□□□□□ -0.92
VRK3-210ENST00000596121 NRASP01111 189 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 ADRA2CP18825 462 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 GTF2A1P52655 376 aaPredicted RBP9.28□□□□□ -0.92
VRK3-210ENST00000596121 AQP4P55087 323 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 GNG3P63215 75 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 DOC2BQ14184 412 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 UBE2V2Q15819 145 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 KLHL22Q53GT1 634 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 CLVS2Q5SYC1 327 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 PLCXD3Q63HM9 321 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 RNF144BQ7Z419 303 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 FAM220AQ7Z4H9 259 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 SYS1Q8N2H4 156 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 OR5T2Q8NGG2 359 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 OR5A2Q8NGI9 324 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 OR51A4Q8NGJ6 313 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 AQP3Q92482 292 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 GGHQ92820 318 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 ITFG2Q969R8 447 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 ADAT3Q96EY9 351 aaPredicted RBP9.28□□□□□ -0.92
VRK3-210ENST00000596121 NEIL1Q96FI4 390 aaPredicted RBP9.28□□□□□ -0.92
VRK3-210ENST00000596121 ZNF488Q96MN9 340 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 HIST1H2AAQ96QV6 131 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 JAM3Q9BX67 310 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 ABCB9Q9NP78 766 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 LPAR3Q9UBY5 353 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 CLEC2DQ9UHP7 191 aa9.28□□□□□ -0.92
VRK3-210ENST00000596121 SIRT4Q9Y6E7 314 aaPredicted RBP9.28□□□□□ -0.92
VRK3-210ENST00000596121 PPIAL4CA0A0B4J2A2 164 aa9.27□□□□□ -0.93
VRK3-210ENST00000596121 A0A0G2JMP0 313 aa9.27□□□□□ -0.93
VRK3-210ENST00000596121 A0A0X1KG70 313 aa9.27□□□□□ -0.93
VRK3-210ENST00000596121 A0A1B0GVI7 797 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms