RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 Q8N2B8 174 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 C11orf42Q8N5U0 333 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 ZNRF1Q8ND25 227 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 OR4S1Q8NGB4 309 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 OR6K6Q8NGW6 343 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 OR4Q3Q8NH05 313 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 OR5K1Q8NHB7 308 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 SGCDQ92629 289 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 OR10A2Q9H208 303 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 RGCCQ9H4X1 137 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 CCDC134Q9H6E4 229 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 SP140LQ9H930 580 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 IL1RAPQ9NPH3 570 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 C19orf12Q9NSK7 152 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 DNAJC27Q9NZQ0 273 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 KMT2CQ8NEZ4 4911 aaKnown RBP8.08□□□□□ -1.12
LIG1-209ENST00000596104 VGLL3A8MV65 326 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 GMNNO75496 209 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 RHBDL1O75783 438 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 APOC1P02654 83 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 FABP3P05413 133 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 H2AFXP16104 143 aaPredicted RBP8.07□□□□□ -1.12
LIG1-209ENST00000596104 POU1F1P28069 291 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 GABRA2P47869 451 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 BMXP51813 675 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 EMX1Q04741 257 aaPredicted RBP8.07□□□□□ -1.12
LIG1-209ENST00000596104 GFOD2Q3B7J2 385 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 KRT74Q7RTS7 529 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 MKXQ8IYA7 352 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 FAM185AQ8N0U4 392 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 FTMTQ8N4E7 242 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 DTX3Q8N9I9 347 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 TMEM185AQ8NFB2 350 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 MCUR1Q96AQ8 359 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 R3HDM4Q96D70 268 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 SDSLQ96GA7 329 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 PGAM5Q96HS1 289 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 RNF170Q96K19 258 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 LYZL4Q96KX0 146 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 TSSK6Q9BXA6 273 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 WNT10AQ9GZT5 417 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 ABCB9Q9NP78 766 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 BRD7Q9NPI1 651 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 TBC1D23Q9NUY8 699 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 MAGEL2Q9UJ55 1249 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 LYVE1Q9Y5Y7 322 aa8.07□□□□□ -1.12
LIG1-209ENST00000596104 FAM90A8PA6NJQ4 464 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 KRT36O76013 467 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 GASTP01350 101 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 HSD17B1P14061 328 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 GLRA1P23415 457 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 BLVRAP53004 296 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 VAX1Q5SQQ9 334 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 FOXB2Q5VYV0 432 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 CCBE1Q6UXH8 406 aaPredicted RBP8.06□□□□□ -1.12
LIG1-209ENST00000596104 KCTD8Q6ZWB6 473 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 TIGD4Q8IY51 512 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 DYNAPQ8N1N2 210 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 WFDC9Q8NEX5 89 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 OR4F17Q8NGA8 305 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 OR6N2Q8NGY6 317 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 PIGCQ92535 297 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 OR4F4Q96R69 305 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 INTS14Q96SY0 518 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 NKX3-1Q99801 234 aaPredicted RBP8.06□□□□□ -1.12
LIG1-209ENST00000596104 CITED2Q99967 270 aaPredicted RBP8.06□□□□□ -1.12
LIG1-209ENST00000596104 CDCA4Q9BXL8 241 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 MYLK2Q9H1R3 596 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 OR51I2Q9H344 312 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 HEXA-AS1Q9H8Q6 139 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 BAIAP2Q9UQB8 552 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 TCF19Q9Y242 345 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 LRP12Q9Y561 859 aa8.06□□□□□ -1.12
LIG1-209ENST00000596104 DNAH3Q8TD57 4116 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 A6NDX4 124 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 TNFRSF11BO00300 401 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 ARPC2O15144 300 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 MTRF1O75570 445 aaKnown RBP8.05□□□□□ -1.12
LIG1-209ENST00000596104 SOX14O95416 240 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 H2BFMP0C1H6 154 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 GSTT1P30711 240 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 MSX2P35548 267 aaPredicted RBP8.05□□□□□ -1.12
LIG1-209ENST00000596104 GPM6AP51674 278 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 ERVFRD-1P60508 538 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 GNG3P63215 75 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 ZBTB37Q5TC79 503 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 TMEM200BQ69YZ2 307 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 SHFQ7M4L6 423 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 THAP5Q7Z6K1 395 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 CPLX4Q7Z7G2 160 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 LHFPL4Q7Z7J7 247 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 ERI1Q8IV48 349 aaKnown RBP8.05□□□□□ -1.12
LIG1-209ENST00000596104 ZDHHC23Q8IYP9 409 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 LINC00471Q8N535 108 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 AQP11Q8NBQ7 271 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 PAPD5Q8NDF8 572 aaKnown RBP8.05□□□□□ -1.12
LIG1-209ENST00000596104 OR2T33Q8NG76 320 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 CMTM5Q96DZ9 223 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 NSMCE2Q96MF7 247 aa8.05□□□□□ -1.12
LIG1-209ENST00000596104 YY1AP1Q9H869 796 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms