RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 Q6ZRG5 221 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 SGPP2Q8IWX5 399 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 ZNF283Q8N7M2 679 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 POC1BQ8TC44 478 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 PP6455Q8WZ26 134 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 SOX7Q9BT81 388 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 ST6GALNAC5Q9BVH7 336 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 GSKIPQ9P0R6 139 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 FBXL17Q9UF56 701 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 EDARQ9UNE0 448 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 AMDHD2Q9Y303 409 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 STARD10Q9Y365 291 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 B3GALT1Q9Y5Z6 326 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 C5orf42Q9H799 3197 aa11.64□□□□□ -0.55
VRK3-209ENST00000594948 H3BML4 177 aa11.64□□□□□ -0.55
VRK3-209ENST00000594948 DUX1O43812 170 aa11.64□□□□□ -0.55
VRK3-209ENST00000594948 HTR3BO95264 441 aa11.64□□□□□ -0.55
VRK3-209ENST00000594948 SERPINA5P05154 406 aa11.64□□□□□ -0.55
VRK3-209ENST00000594948 SFTPBP07988 381 aa11.64□□□□□ -0.55
VRK3-209ENST00000594948 SEC11BP0C7V7 166 aa11.64□□□□□ -0.55
VRK3-209ENST00000594948 FOLR1P15328 257 aa11.64□□□□□ -0.55
VRK3-209ENST00000594948 BLVRBP30043 206 aaPredicted RBP11.64□□□□□ -0.55
VRK3-209ENST00000594948 CD80P33681 288 aa11.64□□□□□ -0.55
VRK3-209ENST00000594948 ZNF133P52736 654 aaPredicted RBP11.64□□□□□ -0.55
VRK3-209ENST00000594948 SUCLG1P53597 346 aaKnown RBP11.64□□□□□ -0.55
VRK3-209ENST00000594948 SPEM2Q0P670 501 aa11.64□□□□□ -0.55
VRK3-209ENST00000594948 DEFB133Q30KQ1 61 aa11.64□□□□□ -0.55
VRK3-209ENST00000594948 CRIP3Q6Q6R5 217 aa11.64□□□□□ -0.55
VRK3-209ENST00000594948 FAM57BQ71RH2 274 aa11.64□□□□□ -0.55
VRK3-209ENST00000594948 ANKRD37Q7Z713 158 aa11.64□□□□□ -0.55
VRK3-209ENST00000594948 RELTQ969Z4 430 aa11.64□□□□□ -0.55
VRK3-209ENST00000594948 ZNF501Q96CX3 271 aaPredicted RBP11.64□□□□□ -0.55
VRK3-209ENST00000594948 CPNE2Q96FN4 548 aaPredicted RBP11.64□□□□□ -0.55
VRK3-209ENST00000594948 TAAR9Q96RI9 348 aa11.64□□□□□ -0.55
VRK3-209ENST00000594948 NUDT22Q9BRQ3 303 aa11.64□□□□□ -0.55
VRK3-209ENST00000594948 FAM212BQ9NTI7 297 aaPredicted RBP11.64□□□□□ -0.55
VRK3-209ENST00000594948 C2orf72A6NCS6 295 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 C5orf52A6NGY3 159 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 SDCBPO00560 298 aaPredicted RBP11.63□□□□□ -0.55
VRK3-209ENST00000594948 UBE2CO00762 179 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 EIF3GO75821 320 aaKnown RBP eCLIP11.63□□□□□ -0.55
VRK3-209ENST00000594948 MT-ND4LP03901 98 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 RCC1P18754 421 aaPredicted RBP11.63□□□□□ -0.55
VRK3-209ENST00000594948 DLX2Q07687 328 aaPredicted RBP11.63□□□□□ -0.55
VRK3-209ENST00000594948 C1orf189Q5VU69 101 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 SYT13Q7L8C5 426 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 SULF2Q8IWU5 870 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 ZNF561Q8N587 486 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 OR9K2Q8NGE7 335 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 OR5L2Q8NGL0 311 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 HIST1H2BAQ96A08 127 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 PGAM5Q96HS1 289 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 SHDQ96IW2 340 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 TCEAL7Q9BRU2 100 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 DUSP15Q9H1R2 295 aaPredicted RBP11.63□□□□□ -0.55
VRK3-209ENST00000594948 PLA2G2EQ9NZK7 142 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 SEC16AO15027 2179 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 ARID1BQ8NFD5 2236 aaPredicted RBP11.63□□□□□ -0.55
VRK3-209ENST00000594948 METTL12A8MUP2 240 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 TLX3O43711 291 aaPredicted RBP11.63□□□□□ -0.55
VRK3-209ENST00000594948 DHRS3O75911 302 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 SLC2A1P11166 492 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 AGAP20933 346 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 SNCAP37840 140 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 OR1D5P58170 312 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 ACY1Q03154 408 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 CFHR1Q03591 330 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 HGFACQ04756 655 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 SMAD4Q13485 552 aaKnown RBP11.63□□□□□ -0.55
VRK3-209ENST00000594948 OR2A2Q6IF42 318 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 FOXL2NBQ6ZUU3 175 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 STT3BQ8TCJ2 826 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 C2CD4CQ8TF44 421 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 PCED1AQ9H1Q7 454 aa11.63□□□□□ -0.55
VRK3-209ENST00000594948 STRAPQ9Y3F4 350 aaKnown RBP11.63□□□□□ -0.55
VRK3-209ENST00000594948 CEP192Q8TEP8 1941 aa11.62□□□□□ -0.55
VRK3-209ENST00000594948 BORCS7-ASMTA0A0B4J1R7 106 aa11.62□□□□□ -0.55
VRK3-209ENST00000594948 C9JQL5 133 aa11.62□□□□□ -0.55
VRK3-209ENST00000594948 E5RGE8 158 aa11.62□□□□□ -0.55
VRK3-209ENST00000594948 RER1O15258 196 aa11.62□□□□□ -0.55
VRK3-209ENST00000594948 ACAA1P09110 424 aaPredicted RBP11.62□□□□□ -0.55
VRK3-209ENST00000594948 QDPRP09417 244 aa11.62□□□□□ -0.55
VRK3-209ENST00000594948 CDAP32320 146 aa11.62□□□□□ -0.55
VRK3-209ENST00000594948 PTGDSP41222 190 aa11.62□□□□□ -0.55
VRK3-209ENST00000594948 RAB5CP51148 216 aa11.62□□□□□ -0.55
VRK3-209ENST00000594948 TMEM33P57088 247 aa11.62□□□□□ -0.55
VRK3-209ENST00000594948 MFAP5Q13361 173 aa11.62□□□□□ -0.55
VRK3-209ENST00000594948 SHHQ15465 462 aa11.62□□□□□ -0.55
VRK3-209ENST00000594948 GPR157Q5UAW9 335 aa11.62□□□□□ -0.55
VRK3-209ENST00000594948 GGNBP1Q5YKI7 109 aa11.62□□□□□ -0.55
VRK3-209ENST00000594948 C16orf47Q6ZP98 133 aaPredicted RBP11.62□□□□□ -0.55
VRK3-209ENST00000594948 RABEPKQ7Z6M1 372 aa11.62□□□□□ -0.55
VRK3-209ENST00000594948 LRTM2Q8N967 370 aa11.62□□□□□ -0.55
VRK3-209ENST00000594948 SEMA6DQ8NFY4 1073 aa11.62□□□□□ -0.55
VRK3-209ENST00000594948 SNIP1Q8TAD8 396 aaKnown RBP11.62□□□□□ -0.55
VRK3-209ENST00000594948 HAS2Q92819 552 aa11.62□□□□□ -0.55
VRK3-209ENST00000594948 GINS3Q9BRX5 216 aa11.62□□□□□ -0.55
VRK3-209ENST00000594948 CHST5Q9GZS9 411 aa11.62□□□□□ -0.55
VRK3-209ENST00000594948 KLRF1Q9NZS2 232 aa11.62□□□□□ -0.55
VRK3-209ENST00000594948 ATXN7L1Q9ULK2 861 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms