RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 YIPF7Q8N8F6 280 aa14.75□□□□□ -0.05
SHKBP1-204ENST00000594862 HPSE2Q8WWQ2 592 aa14.75□□□□□ -0.05
SHKBP1-204ENST00000594862 APOL4Q9BPW4 351 aa14.75□□□□□ -0.05
SHKBP1-204ENST00000594862 MS4A7Q9GZW8 240 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-204ENST00000594862 DNAJB11Q9UBS4 358 aa14.75□□□□□ -0.05
SHKBP1-204ENST00000594862 MRM2Q9UI43 246 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-204ENST00000594862 PIGLQ9Y2B2 252 aa14.75□□□□□ -0.05
SHKBP1-204ENST00000594862 C22orf46C9J442 243 aa14.74□□□□□ -0.05
SHKBP1-204ENST00000594862 SNRPGP62308 76 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-204ENST00000594862 KLF17Q5JT82 389 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-204ENST00000594862 ZNF684Q5T5D7 378 aa14.74□□□□□ -0.05
SHKBP1-204ENST00000594862 PLCXD3Q63HM9 321 aa14.74□□□□□ -0.05
SHKBP1-204ENST00000594862 DOK3Q7L591 496 aa14.74□□□□□ -0.05
SHKBP1-204ENST00000594862 SCCPDHQ8NBX0 429 aa14.74□□□□□ -0.05
SHKBP1-204ENST00000594862 OR10H4Q8NGA5 316 aa14.74□□□□□ -0.05
SHKBP1-204ENST00000594862 ZNF671Q8TAW3 534 aa14.74□□□□□ -0.05
SHKBP1-204ENST00000594862 EME1Q96AY2 570 aa14.74□□□□□ -0.05
SHKBP1-204ENST00000594862 PCDHGB1Q9Y5G3 927 aa14.74□□□□□ -0.05
SHKBP1-204ENST00000594862 TRAV40A0A0B4J280 105 aa14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 A0A1W2PQL4 384 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 METTL15A6NJ78 407 aa14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 ZNF879B4DU55 563 aa14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 P2RY10O00398 339 aa14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 DLGAP1O14490 977 aa14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 DVL1O14640 695 aa14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 MPZL2O60487 215 aa14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 PLATP00750 562 aa14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 NRASP01111 189 aa14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 FAHP16930 419 aa14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 GPM6AP51674 278 aa14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 ACTG1P63261 375 aa14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 TUSC1Q2TAM9 212 aa14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 WDR38Q5JTN6 314 aa14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 CLVS2Q5SYC1 327 aa14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 ATPAF1Q5TC12 328 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 GPR157Q5UAW9 335 aa14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 STUMQ69YW2 141 aa14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 CBR4Q8N4T8 237 aa14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 RPL3LQ92901 407 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 MRPL48Q96GC5 212 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 MED30Q96HR3 178 aa14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 PPP1R3EQ9H7J1 279 aa14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 PLEKHA1Q9HB21 404 aa14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 ZNF69Q9UC07 566 aa14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 V9GYS6 101 aa14.73□□□□□ -0.05
SHKBP1-204ENST00000594862 IGHV3OR15-7A0A075B7D8 119 aa14.72□□□□□ -0.05
SHKBP1-204ENST00000594862 A0A1B0GVI7 797 aa14.72□□□□□ -0.05
SHKBP1-204ENST00000594862 ZNF732B4DXR9 585 aa14.72□□□□□ -0.05
SHKBP1-204ENST00000594862 NDUFB3O43676 98 aa14.72□□□□□ -0.05
SHKBP1-204ENST00000594862 CCL1P22362 96 aa14.72□□□□□ -0.05
SHKBP1-204ENST00000594862 FGF12P61328 243 aa14.72□□□□□ -0.05
SHKBP1-204ENST00000594862 OCLNQ16625 522 aa14.72□□□□□ -0.05
SHKBP1-204ENST00000594862 LRRC10Q5BKY1 277 aa14.72□□□□□ -0.05
SHKBP1-204ENST00000594862 METTL11BQ5VVY1 283 aa14.72□□□□□ -0.05
SHKBP1-204ENST00000594862 Q6ZSR3 168 aa14.72□□□□□ -0.05
SHKBP1-204ENST00000594862 MOB3CQ70IA8 216 aa14.72□□□□□ -0.05
SHKBP1-204ENST00000594862 KCTD20Q7Z5Y7 419 aa14.72□□□□□ -0.05
SHKBP1-204ENST00000594862 ZNF573Q86YE8 665 aa14.72□□□□□ -0.05
SHKBP1-204ENST00000594862 ST8SIA4Q92187 359 aa14.72□□□□□ -0.05
SHKBP1-204ENST00000594862 STMN2Q93045 179 aa14.72□□□□□ -0.05
SHKBP1-204ENST00000594862 TBX5Q99593 518 aa14.72□□□□□ -0.05
SHKBP1-204ENST00000594862 OR51I2Q9H344 312 aa14.72□□□□□ -0.05
SHKBP1-204ENST00000594862 SMURF1Q9HCE7 757 aa14.72□□□□□ -0.05
SHKBP1-204ENST00000594862 S100A14Q9HCY8 104 aa14.72□□□□□ -0.05
SHKBP1-204ENST00000594862 RASL12Q9NYN1 266 aa14.72□□□□□ -0.05
SHKBP1-204ENST00000594862 POLDIP2Q9Y2S7 368 aa14.72□□□□□ -0.05
SHKBP1-204ENST00000594862 RGS9O75916 674 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-204ENST00000594862 RPP14O95059 124 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-204ENST00000594862 UBCP0CG48 685 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-204ENST00000594862 GLRA1P23415 457 aa14.71□□□□□ -0.05
SHKBP1-204ENST00000594862 IL13RA1P78552 427 aa14.71□□□□□ -0.05
SHKBP1-204ENST00000594862 HOXA4Q00056 320 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-204ENST00000594862 PDCD1Q15116 288 aa14.71□□□□□ -0.05
SHKBP1-204ENST00000594862 CEP78Q5JTW2 689 aa14.71□□□□□ -0.05
SHKBP1-204ENST00000594862 TMEM42Q69YG0 159 aa14.71□□□□□ -0.05
SHKBP1-204ENST00000594862 CATSPERDQ86XM0 798 aa14.71□□□□□ -0.05
SHKBP1-204ENST00000594862 CMTM4Q8IZR5 234 aa14.71□□□□□ -0.05
SHKBP1-204ENST00000594862 PQLC1Q8N2U9 271 aa14.71□□□□□ -0.05
SHKBP1-204ENST00000594862 SIGLECL1Q8N7X8 197 aa14.71□□□□□ -0.05
SHKBP1-204ENST00000594862 C22orf15Q8WYQ4 148 aa14.71□□□□□ -0.05
SHKBP1-204ENST00000594862 TMIGD2Q96BF3 282 aa14.71□□□□□ -0.05
SHKBP1-204ENST00000594862 Q96MT0 163 aa14.71□□□□□ -0.05
SHKBP1-204ENST00000594862 CCL13Q99616 98 aa14.71□□□□□ -0.05
SHKBP1-204ENST00000594862 ADI1Q9BV57 179 aa14.71□□□□□ -0.05
SHKBP1-204ENST00000594862 NLKQ9UBE8 527 aa14.71□□□□□ -0.05
SHKBP1-204ENST00000594862 RPUSD1Q9UJJ7 312 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-204ENST00000594862 SLC22A13Q9Y226 551 aa14.71□□□□□ -0.05
SHKBP1-204ENST00000594862 GMPPBQ9Y5P6 360 aa14.71□□□□□ -0.05
SHKBP1-204ENST00000594862 ANK2Q01484 3957 aa14.71□□□□□ -0.05
SHKBP1-204ENST00000594862 GATBO75879 557 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-204ENST00000594862 TOX4O94842 621 aa14.7□□□□□ -0.06
SHKBP1-204ENST00000594862 TGM4P49221 684 aa14.7□□□□□ -0.06
SHKBP1-204ENST00000594862 ACTA2P62736 377 aa14.7□□□□□ -0.06
SHKBP1-204ENST00000594862 UBA52P62987 128 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-204ENST00000594862 ACTG2P63267 376 aa14.7□□□□□ -0.06
SHKBP1-204ENST00000594862 SMIM21Q3B7S5 101 aa14.7□□□□□ -0.06
SHKBP1-204ENST00000594862 BTN2A1Q7KYR7 527 aa14.7□□□□□ -0.06
SHKBP1-204ENST00000594862 SSX6Q7RTT6 188 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms