RNA–Protein interactions for RNA: ENST00000591709.1

POLR2E-208, Transcript of RNA polymerase II subunit E, human

TSL 2

Gene POLR2E, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2E-208	ENST00000591709	SPSB4	Q96A44	273 aa		13.91	□□□□□ -0.18
POLR2E-208	ENST00000591709	ITPKC	Q96DU7	683 aa		13.91	□□□□□ -0.18
POLR2E-208	ENST00000591709	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.91	□□□□□ -0.18
POLR2E-208	ENST00000591709	TTTY10	Q9BZA0	68 aa		13.91	□□□□□ -0.18
POLR2E-208	ENST00000591709	SLC22A4	Q9H015	551 aa		13.91	□□□□□ -0.18
POLR2E-208	ENST00000591709	OR10A2	Q9H208	303 aa		13.91	□□□□□ -0.18
POLR2E-208	ENST00000591709	SMURF1	Q9HCE7	757 aa		13.91	□□□□□ -0.18
POLR2E-208	ENST00000591709	UFSP2	Q9NUQ7	469 aa		13.91	□□□□□ -0.18
POLR2E-208	ENST00000591709	ZNRD1	Q9P1U0	126 aa		13.91	□□□□□ -0.18
POLR2E-208	ENST00000591709	ZNF319	Q9P2F9	582 aa		13.91	□□□□□ -0.18
POLR2E-208	ENST00000591709	SIGLEC9	Q9Y336	463 aa		13.91	□□□□□ -0.18
POLR2E-208	ENST00000591709	FAM96B	Q9Y3D0	163 aa		13.91	□□□□□ -0.18
POLR2E-208	ENST00000591709	LRP12	Q9Y561	859 aa		13.91	□□□□□ -0.18
POLR2E-208	ENST00000591709	TENM3	Q9P273	2699 aa		13.9	□□□□□ -0.18
POLR2E-208	ENST00000591709	LIPF	P07098	398 aa		13.9	□□□□□ -0.18
POLR2E-208	ENST00000591709	TGFBR2	P37173	567 aa		13.9	□□□□□ -0.18
POLR2E-208	ENST00000591709	FAM3A	P98173	230 aa		13.9	□□□□□ -0.18
POLR2E-208	ENST00000591709	AADACL4	Q5VUY2	407 aa		13.9	□□□□□ -0.18
POLR2E-208	ENST00000591709	NXNL2	Q5VZ03	156 aa		13.9	□□□□□ -0.18
POLR2E-208	ENST00000591709	SLC35E4	Q6ICL7	350 aa		13.9	□□□□□ -0.18
POLR2E-208	ENST00000591709	C10orf67	Q8IYJ2	551 aa		13.9	□□□□□ -0.18
POLR2E-208	ENST00000591709	GALNT4	Q8N4A0	578 aa		13.9	□□□□□ -0.18
POLR2E-208	ENST00000591709	PNLDC1	Q8NA58	520 aa	Known RBP	13.9	□□□□□ -0.18
POLR2E-208	ENST00000591709	PHF21A	Q96BD5	680 aa		13.9	□□□□□ -0.18
POLR2E-208	ENST00000591709	CNN2	Q99439	309 aa	Known RBP	13.9	□□□□□ -0.18
POLR2E-208	ENST00000591709	GABARAPL3	Q9BY60	117 aa		13.9	□□□□□ -0.18
POLR2E-208	ENST00000591709	MRPL15	Q9P015	296 aa	Known RBP	13.9	□□□□□ -0.18
POLR2E-208	ENST00000591709	ERVK-18	Q9QC07	812 aa		13.9	□□□□□ -0.18
POLR2E-208	ENST00000591709	COPS3	Q9UNS2	423 aa		13.9	□□□□□ -0.18
POLR2E-208	ENST00000591709	FOXJ3	Q9UPW0	622 aa		13.9	□□□□□ -0.18
POLR2E-208	ENST00000591709	NOP16	Q9Y3C1	178 aa	Known RBP	13.9	□□□□□ -0.18
POLR2E-208	ENST00000591709	ANKRD61	A6NGH8	418 aa		13.89	□□□□□ -0.19
POLR2E-208	ENST00000591709	ANKRD30BL	A7E2S9	258 aa		13.89	□□□□□ -0.19
POLR2E-208	ENST00000591709	EI24	O14681	340 aa		13.89	□□□□□ -0.19
POLR2E-208	ENST00000591709	GMDS	O60547	372 aa		13.89	□□□□□ -0.19
POLR2E-208	ENST00000591709	FAM20B	O75063	409 aa		13.89	□□□□□ -0.19
POLR2E-208	ENST00000591709	GABRA5	P31644	462 aa		13.89	□□□□□ -0.19
POLR2E-208	ENST00000591709	DDOST	P39656	456 aa		13.89	□□□□□ -0.19
POLR2E-208	ENST00000591709	CD200	P41217	278 aa		13.89	□□□□□ -0.19
POLR2E-208	ENST00000591709	ARF6	P62330	175 aa		13.89	□□□□□ -0.19
POLR2E-208	ENST00000591709	MPPED2	Q15777	294 aa		13.89	□□□□□ -0.19
POLR2E-208	ENST00000591709	KCTD18	Q6PI47	426 aa	Predicted RBP	13.89	□□□□□ -0.19
POLR2E-208	ENST00000591709	GID4	Q8IVV7	300 aa		13.89	□□□□□ -0.19
POLR2E-208	ENST00000591709	LYG1	Q8N1E2	194 aa		13.89	□□□□□ -0.19
POLR2E-208	ENST00000591709	CELF2-AS1	Q8N7Q2	184 aa		13.89	□□□□□ -0.19
POLR2E-208	ENST00000591709	PPA2	Q9H2U2	334 aa		13.89	□□□□□ -0.19
POLR2E-208	ENST00000591709	NIPAL2	Q9H841	368 aa		13.89	□□□□□ -0.19
POLR2E-208	ENST00000591709	ORC6	Q9Y5N6	252 aa		13.89	□□□□□ -0.19
POLR2E-208	ENST00000591709	hCG_38984	A0A1B0GV85	526 aa		13.88	□□□□□ -0.19
POLR2E-208	ENST00000591709	MPIG6B	O95866	241 aa		13.88	□□□□□ -0.19
POLR2E-208	ENST00000591709	ALPL	P05186	524 aa		13.88	□□□□□ -0.19
POLR2E-208	ENST00000591709	FBP1	P09467	338 aa		13.88	□□□□□ -0.19
POLR2E-208	ENST00000591709	CFL1	P23528	166 aa	Known RBP	13.88	□□□□□ -0.19
POLR2E-208	ENST00000591709	GATA4	P43694	442 aa		13.88	□□□□□ -0.19
POLR2E-208	ENST00000591709	GSK3A	P49840	483 aa		13.88	□□□□□ -0.19
POLR2E-208	ENST00000591709	PSMA6	P60900	246 aa	Known RBP	13.88	□□□□□ -0.19
POLR2E-208	ENST00000591709	ZIK1	Q3SY52	487 aa	Predicted RBP	13.88	□□□□□ -0.19
POLR2E-208	ENST00000591709	SFRP4	Q6FHJ7	346 aa	Predicted RBP	13.88	□□□□□ -0.19
POLR2E-208	ENST00000591709	C1orf122	Q6ZSJ8	110 aa		13.88	□□□□□ -0.19
POLR2E-208	ENST00000591709	SLC35F2	Q8IXU6	374 aa		13.88	□□□□□ -0.19
POLR2E-208	ENST00000591709	OR8B12	Q8NGG6	310 aa		13.88	□□□□□ -0.19
POLR2E-208	ENST00000591709	OR11L1	Q8NGX0	322 aa		13.88	□□□□□ -0.19
POLR2E-208	ENST00000591709	MRO	Q9BYG7	248 aa		13.88	□□□□□ -0.19
POLR2E-208	ENST00000591709	RGCC	Q9H4X1	137 aa		13.88	□□□□□ -0.19
POLR2E-208	ENST00000591709	ADGRL4	Q9HBW9	690 aa		13.88	□□□□□ -0.19
POLR2E-208	ENST00000591709	S100A14	Q9HCY8	104 aa		13.88	□□□□□ -0.19
POLR2E-208	ENST00000591709	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.88	□□□□□ -0.19
POLR2E-208	ENST00000591709	FBLN5	Q9UBX5	448 aa		13.88	□□□□□ -0.19
POLR2E-208	ENST00000591709	IKZF2	Q9UKS7	526 aa		13.88	□□□□□ -0.19
POLR2E-208	ENST00000591709	TMEM14A	Q9Y6G1	99 aa		13.88	□□□□□ -0.19
POLR2E-208	ENST00000591709	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	13.87	□□□□□ -0.19
POLR2E-208	ENST00000591709	PRR32	B1ATL7	298 aa		13.87	□□□□□ -0.19
POLR2E-208	ENST00000591709	ADAM20	O43506	726 aa		13.87	□□□□□ -0.19
POLR2E-208	ENST00000591709	XPNPEP2	O43895	674 aa		13.87	□□□□□ -0.19
POLR2E-208	ENST00000591709	GRP	P07492	148 aa		13.87	□□□□□ -0.19
POLR2E-208	ENST00000591709	CXCR4	P61073	352 aa		13.87	□□□□□ -0.19
POLR2E-208	ENST00000591709	VMO1	Q7Z5L0	202 aa		13.87	□□□□□ -0.19
POLR2E-208	ENST00000591709	CBR4	Q8N4T8	237 aa		13.87	□□□□□ -0.19
POLR2E-208	ENST00000591709	KLHDC1	Q8N7A1	406 aa		13.87	□□□□□ -0.19
POLR2E-208	ENST00000591709	BOLL	Q8N9W6	283 aa	Known RBP	13.87	□□□□□ -0.19
POLR2E-208	ENST00000591709	OR51G2	Q8NGK0	314 aa		13.87	□□□□□ -0.19
POLR2E-208	ENST00000591709	OR8S1	Q8NH09	359 aa		13.87	□□□□□ -0.19
POLR2E-208	ENST00000591709	ASB17	Q8WXJ9	295 aa		13.87	□□□□□ -0.19
POLR2E-208	ENST00000591709	ERGIC1	Q969X5	290 aa		13.87	□□□□□ -0.19
POLR2E-208	ENST00000591709	OR8B4	Q96RC9	309 aa		13.87	□□□□□ -0.19
POLR2E-208	ENST00000591709	FN3KRP	Q9HA64	309 aa		13.87	□□□□□ -0.19
POLR2E-208	ENST00000591709	USE1	Q9NZ43	259 aa		13.87	□□□□□ -0.19
POLR2E-208	ENST00000591709	TMEM269	A0A1B0GVZ9	245 aa		13.86	□□□□□ -0.19
POLR2E-208	ENST00000591709		A6NLC8	198 aa		13.86	□□□□□ -0.19
POLR2E-208	ENST00000591709	ZNF670-ZNF695	F2Z2N8	137 aa		13.86	□□□□□ -0.19
POLR2E-208	ENST00000591709	MAGEB4	O15481	346 aa	Predicted RBP	13.86	□□□□□ -0.19
POLR2E-208	ENST00000591709	GNAL	P38405	381 aa		13.86	□□□□□ -0.19
POLR2E-208	ENST00000591709	ALDH3A2	P51648	485 aa		13.86	□□□□□ -0.19
POLR2E-208	ENST00000591709	RIDA	P52758	137 aa	Known RBP	13.86	□□□□□ -0.19
POLR2E-208	ENST00000591709	EFNB2	P52799	333 aa		13.86	□□□□□ -0.19
POLR2E-208	ENST00000591709	CDC42	P60953	191 aa		13.86	□□□□□ -0.19
POLR2E-208	ENST00000591709	ROM1	Q03395	351 aa		13.86	□□□□□ -0.19
POLR2E-208	ENST00000591709	PRB3	Q04118	309 aa	Predicted RBP	13.86	□□□□□ -0.19
POLR2E-208	ENST00000591709	DEGS2	Q6QHC5	323 aa		13.86	□□□□□ -0.19
POLR2E-208	ENST00000591709	ZNF322	Q6U7Q0	402 aa	Predicted RBP	13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms