RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 YIPF3Q9GZM5 350 aa11.88□□□□□ -0.51
MBD1-220ENST00000589758 SIRPDQ9H106 197 aa11.88□□□□□ -0.51
MBD1-220ENST00000589758 TLNRD1Q9H1K6 362 aa11.88□□□□□ -0.51
MBD1-220ENST00000589758 CNTD2Q9H8S5 307 aa11.88□□□□□ -0.51
MBD1-220ENST00000589758 ACOXLQ9NUZ1 547 aa11.88□□□□□ -0.51
MBD1-220ENST00000589758 ZNF319Q9P2F9 582 aa11.88□□□□□ -0.51
MBD1-220ENST00000589758 AASSQ9UDR5 926 aa11.88□□□□□ -0.51
MBD1-220ENST00000589758 RHBDD3Q9Y3P4 386 aa11.88□□□□□ -0.51
MBD1-220ENST00000589758 MMP24Q9Y5R2 645 aa11.88□□□□□ -0.51
MBD1-220ENST00000589758 KPTNQ9Y664 436 aa11.88□□□□□ -0.51
MBD1-220ENST00000589758 POMT1Q9Y6A1 747 aa11.88□□□□□ -0.51
MBD1-220ENST00000589758 TENM1Q9UKZ4 2725 aa11.87□□□□□ -0.51
MBD1-220ENST00000589758 IGHV3OR15-7A0A075B7D8 119 aa11.87□□□□□ -0.51
MBD1-220ENST00000589758 IGHV1-69DA0A0B4J2H0 117 aa11.87□□□□□ -0.51
MBD1-220ENST00000589758 TMEM210A6NLX4 147 aa11.87□□□□□ -0.51
MBD1-220ENST00000589758 IGHV1-69P01742 117 aa11.87□□□□□ -0.51
MBD1-220ENST00000589758 ARF6P62330 175 aa11.87□□□□□ -0.51
MBD1-220ENST00000589758 CSNK2BP67870 215 aa11.87□□□□□ -0.51
MBD1-220ENST00000589758 POU4F2Q12837 409 aa11.87□□□□□ -0.51
MBD1-220ENST00000589758 WDR38Q5JTN6 314 aa11.87□□□□□ -0.51
MBD1-220ENST00000589758 RUSC1-AS1Q66K80 236 aa11.87□□□□□ -0.51
MBD1-220ENST00000589758 KRT77Q7Z794 578 aa11.87□□□□□ -0.51
MBD1-220ENST00000589758 SLC35F2Q8IXU6 374 aa11.87□□□□□ -0.51
MBD1-220ENST00000589758 OR10Z1Q8NGY1 313 aa11.87□□□□□ -0.51
MBD1-220ENST00000589758 TBC1D15Q8TC07 691 aa11.87□□□□□ -0.51
MBD1-220ENST00000589758 DNTTIP1Q9H147 329 aa11.87□□□□□ -0.51
MBD1-220ENST00000589758 ADGRL4Q9HBW9 690 aa11.87□□□□□ -0.51
MBD1-220ENST00000589758 FAM118AQ9NWS6 357 aa11.87□□□□□ -0.51
MBD1-220ENST00000589758 SMPD3Q9NY59 655 aaPredicted RBP11.87□□□□□ -0.51
MBD1-220ENST00000589758 RPUSD1Q9UJJ7 312 aaKnown RBP11.87□□□□□ -0.51
MBD1-220ENST00000589758 COPS3Q9UNS2 423 aa11.87□□□□□ -0.51
MBD1-220ENST00000589758 LOC100130705A0A1B0GUX0 176 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 A0A1B0GVI7 797 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 FAM181BA6NEQ2 426 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 ACOD1A6NK06 481 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 CDIPTO14735 213 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 NDUFB3O43676 98 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 CST4P01036 141 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 MELTFP08582 738 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 ALOX5APP20292 161 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 MDKP21741 143 aaPredicted RBP11.86□□□□□ -0.51
MBD1-220ENST00000589758 ATP6V1E1P36543 226 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 PSMA6P60900 246 aaKnown RBP11.86□□□□□ -0.51
MBD1-220ENST00000589758 RPL15P61313 204 aaKnown RBP11.86□□□□□ -0.51
MBD1-220ENST00000589758 PRDX4Q13162 271 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 CDONQ4KMG0 1287 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 ATPAF1Q5TC12 328 aaPredicted RBP11.86□□□□□ -0.51
MBD1-220ENST00000589758 FIP1L1Q6UN15 594 aaKnown RBP11.86□□□□□ -0.51
MBD1-220ENST00000589758 CMTM4Q8IZR5 234 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 SCCPDHQ8NBX0 429 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 LY6G5BQ8NDX9 201 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 ZNF555Q8NEP9 628 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 OR4F5Q8NH21 305 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 SSMEM1Q8WWF3 244 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 PIGCQ92535 297 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 LHX4Q969G2 390 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 HIST1H2AAQ96QV6 131 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 TBX5Q99593 518 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 CCL13Q99616 98 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 BEX1Q9HBH7 125 aa11.86□□□□□ -0.51
MBD1-220ENST00000589758 WARS2Q9UGM6 360 aaKnown RBP11.86□□□□□ -0.51
MBD1-220ENST00000589758 ZNF850A8MQ14 1090 aa11.85□□□□□ -0.51
MBD1-220ENST00000589758 E9PQ18 207 aa11.85□□□□□ -0.51
MBD1-220ENST00000589758 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.85□□□□□ -0.51
MBD1-220ENST00000589758 MAGEB4O15481 346 aaPredicted RBP11.85□□□□□ -0.51
MBD1-220ENST00000589758 ENTPD6O75354 484 aa11.85□□□□□ -0.51
MBD1-220ENST00000589758 FCN3O75636 299 aa11.85□□□□□ -0.51
MBD1-220ENST00000589758 HTR1FP30939 366 aa11.85□□□□□ -0.51
MBD1-220ENST00000589758 CXCR4P61073 352 aa11.85□□□□□ -0.51
MBD1-220ENST00000589758 LRRC10Q5BKY1 277 aa11.85□□□□□ -0.51
MBD1-220ENST00000589758 FAM76BQ5HYJ3 339 aa11.85□□□□□ -0.51
MBD1-220ENST00000589758 KCTD18Q6PI47 426 aaPredicted RBP11.85□□□□□ -0.51
MBD1-220ENST00000589758 METAP1DQ6UB28 335 aaPredicted RBP11.85□□□□□ -0.51
MBD1-220ENST00000589758 KCTD8Q6ZWB6 473 aa11.85□□□□□ -0.51
MBD1-220ENST00000589758 NPRL2Q8WTW4 380 aa11.85□□□□□ -0.51
MBD1-220ENST00000589758 TRUB1Q8WWH5 349 aaKnown RBP11.85□□□□□ -0.51
MBD1-220ENST00000589758 OR5P3Q8WZ94 311 aa11.85□□□□□ -0.51
MBD1-220ENST00000589758 RFKQ969G6 155 aa11.85□□□□□ -0.51
MBD1-220ENST00000589758 RNF170Q96K19 258 aa11.85□□□□□ -0.51
MBD1-220ENST00000589758 CHIAQ9BZP6 476 aa11.85□□□□□ -0.51
MBD1-220ENST00000589758 PPP1R3EQ9H7J1 279 aa11.85□□□□□ -0.51
MBD1-220ENST00000589758 DCLRE1BQ9H816 532 aa11.85□□□□□ -0.51
MBD1-220ENST00000589758 TNFRSF19Q9NS68 423 aa11.85□□□□□ -0.51
MBD1-220ENST00000589758 HAO2Q9NYQ3 351 aa11.85□□□□□ -0.51
MBD1-220ENST00000589758 DNAJB11Q9UBS4 358 aa11.85□□□□□ -0.51
MBD1-220ENST00000589758 NKX1-2Q9UD57 310 aaPredicted RBP11.85□□□□□ -0.51
MBD1-220ENST00000589758 IKZF2Q9UKS7 526 aa11.85□□□□□ -0.51
MBD1-220ENST00000589758 CAB39Q9Y376 341 aaPredicted RBP11.85□□□□□ -0.51
MBD1-220ENST00000589758 LRP12Q9Y561 859 aa11.85□□□□□ -0.51
MBD1-220ENST00000589758 NKX6-3A6NJ46 265 aa11.84□□□□□ -0.51
MBD1-220ENST00000589758 PRR32B1ATL7 298 aa11.84□□□□□ -0.51
MBD1-220ENST00000589758 ZNF670-ZNF695F2Z2N8 137 aa11.84□□□□□ -0.51
MBD1-220ENST00000589758 H0YHG0 523 aa11.84□□□□□ -0.51
MBD1-220ENST00000589758 DLGAP1O14490 977 aa11.84□□□□□ -0.51
MBD1-220ENST00000589758 NDUFA7O95182 113 aa11.84□□□□□ -0.51
MBD1-220ENST00000589758 KNG1P01042 644 aa11.84□□□□□ -0.51
MBD1-220ENST00000589758 OMGP23515 440 aa11.84□□□□□ -0.51
MBD1-220ENST00000589758 ACKR3P25106 362 aa11.84□□□□□ -0.51
MBD1-220ENST00000589758 MAP2K3P46734 347 aa11.84□□□□□ -0.51
MBD1-220ENST00000589758 TGM4P49221 684 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms