RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 ERI1Q8IV48 349 aaKnown RBP11.4□□□□□ -0.58
VMP1-209ENST00000588915 TIGD4Q8IY51 512 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 ZNF454Q8N9F8 522 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 AQP11Q8NBQ7 271 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 OR6N2Q8NGY6 317 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 OR4Q3Q8NH05 313 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 PPP1R35Q8TAP8 253 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 RNF170Q96K19 258 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 HIST1H2AAQ96QV6 131 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 CDRT15Q96T59 188 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 NIPAL2Q9H841 368 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 NDE1Q9NXR1 346 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 LRP12Q9Y561 859 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 A0A1W2PPH5 198 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 H0YAE9 185 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 XPNPEP2O43895 674 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 ACKR3P25106 362 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 MSX2P35548 267 aaPredicted RBP11.39□□□□□ -0.59
VMP1-209ENST00000588915 DLX1P56177 255 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 PRB3Q04118 309 aaPredicted RBP11.39□□□□□ -0.59
VMP1-209ENST00000588915 GK3PQ14409 553 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 MICAQ29983 383 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 GFOD2Q3B7J2 385 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 HCP5Q6MZN7 132 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 KCTD8Q6ZWB6 473 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 ZDHHC23Q8IYP9 409 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 PNKDQ8N490 385 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 OR5K1Q8NHB7 308 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 OTOSQ8NHW6 89 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 ZNF671Q8TAW3 534 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 PIGCQ92535 297 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 SDSLQ96GA7 329 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 AJUBAQ96IF1 538 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 CLPTM1LQ96KA5 538 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 ELAC2Q9BQ52 826 aaKnown RBP11.39□□□□□ -0.59
VMP1-209ENST00000588915 CDCA4Q9BXL8 241 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 NPFFR1Q9GZQ6 430 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 HEXA-AS1Q9H8Q6 139 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 RASL12Q9NYN1 266 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 DNAJC27Q9NZQ0 273 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 ACTR3BQ9P1U1 418 aa11.39□□□□□ -0.59
VMP1-209ENST00000588915 IGKV1D-17A0A075B6S4 117 aa11.38□□□□□ -0.59
VMP1-209ENST00000588915 ACOD1A6NK06 481 aa11.38□□□□□ -0.59
VMP1-209ENST00000588915 LYNP07948 512 aa11.38□□□□□ -0.59
VMP1-209ENST00000588915 PSG2P11465 335 aa11.38□□□□□ -0.59
VMP1-209ENST00000588915 ATP6V1B1P15313 513 aa11.38□□□□□ -0.59
VMP1-209ENST00000588915 GABRA2P47869 451 aa11.38□□□□□ -0.59
VMP1-209ENST00000588915 GMFBP60983 142 aa11.38□□□□□ -0.59
VMP1-209ENST00000588915 GNG3P63215 75 aa11.38□□□□□ -0.59
VMP1-209ENST00000588915 KLHDC1Q8N7A1 406 aa11.38□□□□□ -0.59
VMP1-209ENST00000588915 HPSE2Q8WWQ2 592 aa11.38□□□□□ -0.59
VMP1-209ENST00000588915 AMELYQ99218 206 aa11.38□□□□□ -0.59
VMP1-209ENST00000588915 MAGIXQ9H6Y5 334 aa11.38□□□□□ -0.59
VMP1-209ENST00000588915 BRD7Q9NPI1 651 aa11.38□□□□□ -0.59
VMP1-209ENST00000588915 MED4Q9NPJ6 270 aa11.38□□□□□ -0.59
VMP1-209ENST00000588915 ARMC1Q9NVT9 282 aa11.38□□□□□ -0.59
VMP1-209ENST00000588915 ZNF222Q9UK12 451 aa11.38□□□□□ -0.59
VMP1-209ENST00000588915 SIGLEC9Q9Y336 463 aa11.38□□□□□ -0.59
VMP1-209ENST00000588915 hCG_1809904A0A1W2PP81 198 aa11.37□□□□□ -0.59
VMP1-209ENST00000588915 A0A1W2PPE2 198 aa11.37□□□□□ -0.59
VMP1-209ENST00000588915 A0A1W2PR64 198 aa11.37□□□□□ -0.59
VMP1-209ENST00000588915 A0A1W2PRV1 198 aa11.37□□□□□ -0.59
VMP1-209ENST00000588915 PIN1P1O15428 100 aa11.37□□□□□ -0.59
VMP1-209ENST00000588915 ALX3O95076 343 aa11.37□□□□□ -0.59
VMP1-209ENST00000588915 PAICSP22234 425 aaKnown RBP11.37□□□□□ -0.59
VMP1-209ENST00000588915 MAP2K3P46734 347 aa11.37□□□□□ -0.59
VMP1-209ENST00000588915 LY6EQ16553 131 aa11.37□□□□□ -0.59
VMP1-209ENST00000588915 CEACAM21Q3KPI0 293 aa11.37□□□□□ -0.59
VMP1-209ENST00000588915 C16orf89Q6UX73 402 aa11.37□□□□□ -0.59
VMP1-209ENST00000588915 Q6ZPA2 131 aa11.37□□□□□ -0.59
VMP1-209ENST00000588915 ZNRF1Q8ND25 227 aa11.37□□□□□ -0.59
VMP1-209ENST00000588915 OR4S1Q8NGB4 309 aa11.37□□□□□ -0.59
VMP1-209ENST00000588915 OR5A2Q8NGI9 324 aa11.37□□□□□ -0.59
VMP1-209ENST00000588915 FGF23Q9GZV9 251 aaPredicted RBP11.37□□□□□ -0.59
VMP1-209ENST00000588915 OR51I2Q9H344 312 aa11.37□□□□□ -0.59
VMP1-209ENST00000588915 FOXJ3Q9UPW0 622 aa11.37□□□□□ -0.59
VMP1-209ENST00000588915 A0A0U1RQV5 110 aa11.36□□□□□ -0.59
VMP1-209ENST00000588915 OR5B21A6NL26 309 aa11.36□□□□□ -0.59
VMP1-209ENST00000588915 VGLL3A8MV65 326 aa11.36□□□□□ -0.59
VMP1-209ENST00000588915 PRODHO43272 600 aa11.36□□□□□ -0.59
VMP1-209ENST00000588915 ANGPTL7O43827 346 aa11.36□□□□□ -0.59
VMP1-209ENST00000588915 SNX3O60493 162 aa11.36□□□□□ -0.59
VMP1-209ENST00000588915 SOX14O95416 240 aa11.36□□□□□ -0.59
VMP1-209ENST00000588915 GPM6AP51674 278 aa11.36□□□□□ -0.59
VMP1-209ENST00000588915 PSMA6P60900 246 aaKnown RBP11.36□□□□□ -0.59
VMP1-209ENST00000588915 FAM189A2Q15884 450 aa11.36□□□□□ -0.59
VMP1-209ENST00000588915 ZBTB37Q5TC79 503 aa11.36□□□□□ -0.59
VMP1-209ENST00000588915 OR2T5Q6IEZ7 315 aa11.36□□□□□ -0.59
VMP1-209ENST00000588915 CALHM1Q8IU99 346 aa11.36□□□□□ -0.59
VMP1-209ENST00000588915 FAM185AQ8N0U4 392 aa11.36□□□□□ -0.59
VMP1-209ENST00000588915 Q8N2B8 174 aa11.36□□□□□ -0.59
VMP1-209ENST00000588915 TMEM185AQ8NFB2 350 aa11.36□□□□□ -0.59
VMP1-209ENST00000588915 OR2T29Q8NH02 315 aa11.36□□□□□ -0.59
VMP1-209ENST00000588915 TEX47Q8TBZ9 253 aa11.36□□□□□ -0.59
VMP1-209ENST00000588915 THEM6Q8WUY1 208 aa11.36□□□□□ -0.59
VMP1-209ENST00000588915 RORBQ92753 470 aa11.36□□□□□ -0.59
VMP1-209ENST00000588915 LYZL4Q96KX0 146 aa11.36□□□□□ -0.59
VMP1-209ENST00000588915 REEP1Q9H902 201 aa11.36□□□□□ -0.59
VMP1-209ENST00000588915 MED20Q9H944 212 aa11.36□□□□□ -0.59
VMP1-209ENST00000588915 TAGLN3Q9UI15 199 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms