RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 VSIG8P0DPA2 414 aa22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 CD40P25942 277 aa22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 PITPNBP48739 271 aa22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 MMP15P51511 669 aa22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 UNC119Q13432 240 aa22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 ALKBH6Q3KRA9 238 aa22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 C1QL2Q7Z5L3 287 aa22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 ZDHHC23Q8IYP9 409 aa22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 GDPD1Q8N9F7 314 aa22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 RNASE6Q93091 150 aaKnown RBP22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 S100A16Q96FQ6 103 aaKnown RBP22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 WFIKKN1Q96NZ8 548 aa22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 BBC3Q96PG8 261 aaPredicted RBP22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 MRPL15Q9P015 296 aaKnown RBP22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 ANKRD30BLA7E2S9 258 aa22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 IQCF6A8MYZ5 107 aa22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 NKX6-1P78426 367 aaPredicted RBP22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 CEACAM21Q3KPI0 293 aa22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 WFDC8Q8IUA0 241 aa22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 ITPKCQ96DU7 683 aa22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 ZC3HAV1LQ96H79 300 aaKnown RBP22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 ABHD1Q96SE0 405 aa22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 MYEF2Q9P2K5 600 aaKnown RBP22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 MPC1Q9Y5U8 109 aa22.3■■□□□ 1.16
SCAMP4-210ENST00000588555 TMEM14DPA8MWL7 114 aa22.29■■□□□ 1.16
SCAMP4-210ENST00000588555 CTAG2O75638 210 aa22.29■■□□□ 1.16
SCAMP4-210ENST00000588555 RAB6AP20340 208 aa22.29■■□□□ 1.16
SCAMP4-210ENST00000588555 NR4A2P43354 598 aa22.29■■□□□ 1.16
SCAMP4-210ENST00000588555 BAK1Q16611 211 aa22.29■■□□□ 1.16
SCAMP4-210ENST00000588555 C4orf17Q53FE4 359 aa22.29■■□□□ 1.16
SCAMP4-210ENST00000588555 PYDC2Q56P42 97 aa22.29■■□□□ 1.16
SCAMP4-210ENST00000588555 MBNL2Q5VZF2 373 aaKnown RBP22.29■■□□□ 1.16
SCAMP4-210ENST00000588555 TNFAIP8L1Q8WVP5 186 aa22.29■■□□□ 1.16
SCAMP4-210ENST00000588555 CPNE2Q96FN4 548 aaPredicted RBP22.29■■□□□ 1.16
SCAMP4-210ENST00000588555 PQLC2LA1A4F0 135 aa22.28■■□□□ 1.16
SCAMP4-210ENST00000588555 SELEP16581 610 aa22.28■■□□□ 1.16
SCAMP4-210ENST00000588555 CDK2P24941 298 aa22.28■■□□□ 1.16
SCAMP4-210ENST00000588555 SNTB2Q13425 540 aaKnown RBP22.28■■□□□ 1.16
SCAMP4-210ENST00000588555 ZNF181Q2M3W8 571 aa22.28■■□□□ 1.16
SCAMP4-210ENST00000588555 DVL3Q92997 716 aaPredicted RBP22.28■■□□□ 1.16
SCAMP4-210ENST00000588555 ABCB10Q9NRK6 738 aa22.28■■□□□ 1.16
SCAMP4-210ENST00000588555 C14orf119Q9NWQ9 140 aa22.28■■□□□ 1.16
SCAMP4-210ENST00000588555 ATP6V1G2-DDX39BF2Z307 99 aa22.27■■□□□ 1.16
SCAMP4-210ENST00000588555 UBBP0CG47 229 aa22.27■■□□□ 1.16
SCAMP4-210ENST00000588555 RANBP1P43487 201 aa22.27■■□□□ 1.16
SCAMP4-210ENST00000588555 ATP1B3P54709 279 aa22.27■■□□□ 1.16
SCAMP4-210ENST00000588555 MSMPQ1L6U9 139 aa22.27■■□□□ 1.16
SCAMP4-210ENST00000588555 ZNF718Q3SXZ3 478 aa22.27■■□□□ 1.16
SCAMP4-210ENST00000588555 PYHIN1Q6K0P9 492 aa22.27■■□□□ 1.16
SCAMP4-210ENST00000588555 MTFR2Q6P444 385 aa22.27■■□□□ 1.16
SCAMP4-210ENST00000588555 TMEM108Q6UXF1 575 aa22.27■■□□□ 1.16
SCAMP4-210ENST00000588555 BAIAP2L2Q6UXY1 529 aa22.27■■□□□ 1.16
SCAMP4-210ENST00000588555 OR2W3Q7Z3T1 314 aa22.27■■□□□ 1.16
SCAMP4-210ENST00000588555 IZUMO1Q8IYV9 350 aa22.27■■□□□ 1.16
SCAMP4-210ENST00000588555 CA5BP1Q8WTZ4 195 aa22.27■■□□□ 1.16
SCAMP4-210ENST00000588555 OR5P3Q8WZ94 311 aa22.27■■□□□ 1.16
SCAMP4-210ENST00000588555 GHRLQ9UBU3 117 aa22.27■■□□□ 1.16
SCAMP4-210ENST00000588555 KDM4BO94953 1096 aa22.27■■□□□ 1.16
SCAMP4-210ENST00000588555 KITLGP21583 273 aa22.27■■□□□ 1.16
SCAMP4-210ENST00000588555 CA6P23280 308 aa22.27■■□□□ 1.16
SCAMP4-210ENST00000588555 PTAFRP25105 342 aa22.27■■□□□ 1.16
SCAMP4-210ENST00000588555 GRNP28799 593 aaKnown RBP22.27■■□□□ 1.16
SCAMP4-210ENST00000588555 TMEM104Q8NE00 496 aa22.27■■□□□ 1.16
SCAMP4-210ENST00000588555 PURGQ9UJV8 347 aaKnown RBP22.27■■□□□ 1.16
SCAMP4-210ENST00000588555 RAB22AQ9UL26 194 aa22.27■■□□□ 1.16
SCAMP4-210ENST00000588555 DPRXA6NFQ7 191 aa22.26■■□□□ 1.15
SCAMP4-210ENST00000588555 CSF3P09919 207 aa22.26■■□□□ 1.15
SCAMP4-210ENST00000588555 GLRXP35754 106 aa22.26■■□□□ 1.15
SCAMP4-210ENST00000588555 PTH2RP49190 550 aa22.26■■□□□ 1.15
SCAMP4-210ENST00000588555 STEAP3Q658P3 488 aa22.26■■□□□ 1.15
SCAMP4-210ENST00000588555 LYSMD2Q8IV50 215 aa22.26■■□□□ 1.15
SCAMP4-210ENST00000588555 Q8N402 240 aa22.26■■□□□ 1.15
SCAMP4-210ENST00000588555 OR5A2Q8NGI9 324 aa22.26■■□□□ 1.15
SCAMP4-210ENST00000588555 FAM46BQ96A09 425 aa22.26■■□□□ 1.15
SCAMP4-210ENST00000588555 SPEF1Q9Y4P9 236 aa22.26■■□□□ 1.15
SCAMP4-210ENST00000588555 XRCC3O43542 346 aa22.25■■□□□ 1.15
SCAMP4-210ENST00000588555 IL7P13232 177 aa22.25■■□□□ 1.15
SCAMP4-210ENST00000588555 MNDAP41218 407 aa22.25■■□□□ 1.15
SCAMP4-210ENST00000588555 FABP6P51161 128 aa22.25■■□□□ 1.15
SCAMP4-210ENST00000588555 ASCL4Q6XD76 172 aa22.25■■□□□ 1.15
SCAMP4-210ENST00000588555 RABL2AQ9UBK7 228 aaPredicted RBP22.25■■□□□ 1.15
SCAMP4-210ENST00000588555 FZR1Q9UM11 496 aa22.25■■□□□ 1.15
SCAMP4-210ENST00000588555 RABL2BQ9UNT1 228 aa22.25■■□□□ 1.15
SCAMP4-210ENST00000588555 A0A1W2PP11 408 aa22.25■■□□□ 1.15
SCAMP4-210ENST00000588555 HLA-DQB1P01920 261 aa22.25■■□□□ 1.15
SCAMP4-210ENST00000588555 GPM6AP51674 278 aa22.25■■□□□ 1.15
SCAMP4-210ENST00000588555 TFF3Q07654 80 aa22.25■■□□□ 1.15
SCAMP4-210ENST00000588555 TMEM69Q5SWH9 247 aa22.25■■□□□ 1.15
SCAMP4-210ENST00000588555 RGS7BPQ6MZT1 257 aaPredicted RBP22.25■■□□□ 1.15
SCAMP4-210ENST00000588555 CALHM1Q8IU99 346 aa22.25■■□□□ 1.15
SCAMP4-210ENST00000588555 OR8H2Q8N162 312 aa22.25■■□□□ 1.15
SCAMP4-210ENST00000588555 KCNG3Q8TAE7 436 aa22.25■■□□□ 1.15
SCAMP4-210ENST00000588555 ATG5Q9H1Y0 275 aa22.25■■□□□ 1.15
SCAMP4-210ENST00000588555 KCNJ16Q9NPI9 418 aa22.25■■□□□ 1.15
SCAMP4-210ENST00000588555 MRPS7Q9Y2R9 242 aaKnown RBP22.25■■□□□ 1.15
SCAMP4-210ENST00000588555 SPRY1O43609 319 aaPredicted RBP22.24■■□□□ 1.15
SCAMP4-210ENST00000588555 ZNF250P15622 560 aa22.24■■□□□ 1.15
SCAMP4-210ENST00000588555 GCH1P30793 250 aa22.24■■□□□ 1.15
SCAMP4-210ENST00000588555 SORDQ00796 357 aa22.24■■□□□ 1.15
SCAMP4-210ENST00000588555 OR8G5Q8NG78 346 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms