RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 WDR82Q6UXN9 313 aa16.94■□□□□ 0.3
DDX39A-207ENST00000588542 AHSA2Q719I0 299 aa16.94■□□□□ 0.3
DDX39A-207ENST00000588542 GCSAMQ8N6F7 178 aa16.94■□□□□ 0.3
DDX39A-207ENST00000588542 LINC01356Q8N9X3 169 aa16.94■□□□□ 0.3
DDX39A-207ENST00000588542 ZNF485Q8NCK3 441 aa16.94■□□□□ 0.3
DDX39A-207ENST00000588542 C19orf18Q8NEA5 215 aa16.94■□□□□ 0.3
DDX39A-207ENST00000588542 CCDC54Q8NEL0 328 aa16.94■□□□□ 0.3
DDX39A-207ENST00000588542 OR5A2Q8NGI9 324 aa16.94■□□□□ 0.3
DDX39A-207ENST00000588542 OR10AC1Q8NH08 325 aa16.94■□□□□ 0.3
DDX39A-207ENST00000588542 HIST1H2AAQ96QV6 131 aa16.94■□□□□ 0.3
DDX39A-207ENST00000588542 METTL17Q9H7H0 456 aaPredicted RBP16.94■□□□□ 0.3
DDX39A-207ENST00000588542 YAE1D1Q9NRH1 226 aa16.94■□□□□ 0.3
DDX39A-207ENST00000588542 GPR173Q9NS66 373 aa16.94■□□□□ 0.3
DDX39A-207ENST00000588542 PPIAL4AQ9Y536 164 aa16.94■□□□□ 0.3
DDX39A-207ENST00000588542 SLC1A7O00341 560 aa16.93■□□□□ 0.3
DDX39A-207ENST00000588542 MYL12AP19105 171 aa16.93■□□□□ 0.3
DDX39A-207ENST00000588542 ZNF404Q494X3 552 aa16.93■□□□□ 0.3
DDX39A-207ENST00000588542 XAF1Q6GPH4 301 aa16.93■□□□□ 0.3
DDX39A-207ENST00000588542 TMPRSS11AQ6ZMR5 421 aa16.93■□□□□ 0.3
DDX39A-207ENST00000588542 KLHL36Q8N4N3 616 aa16.93■□□□□ 0.3
DDX39A-207ENST00000588542 SCCPDHQ8NBX0 429 aa16.93■□□□□ 0.3
DDX39A-207ENST00000588542 OR51A4Q8NGJ6 313 aa16.93■□□□□ 0.3
DDX39A-207ENST00000588542 RPS4Y2Q8TD47 263 aa16.93■□□□□ 0.3
DDX39A-207ENST00000588542 RPL3LQ92901 407 aaKnown RBP16.93■□□□□ 0.3
DDX39A-207ENST00000588542 RAB39BQ96DA2 213 aa16.93■□□□□ 0.3
DDX39A-207ENST00000588542 TMEM246Q9BRR3 403 aa16.93■□□□□ 0.3
DDX39A-207ENST00000588542 PATZ1Q9HBE1 687 aaKnown RBP16.93■□□□□ 0.3
DDX39A-207ENST00000588542 UBAP1Q9NZ09 502 aa16.93■□□□□ 0.3
DDX39A-207ENST00000588542 hCG_1807616A0A1W2PRN6 198 aa16.92■□□□□ 0.3
DDX39A-207ENST00000588542 OR5B21A6NL26 309 aa16.92■□□□□ 0.3
DDX39A-207ENST00000588542 B4DSR2 109 aa16.92■□□□□ 0.3
DDX39A-207ENST00000588542 ZNF732B4DXR9 585 aa16.92■□□□□ 0.3
DDX39A-207ENST00000588542 INAFM1C9JVW0 142 aa16.92■□□□□ 0.3
DDX39A-207ENST00000588542 F5H0A9 414 aaPredicted RBP16.92■□□□□ 0.3
DDX39A-207ENST00000588542 CDIPTO14735 213 aa16.92■□□□□ 0.3
DDX39A-207ENST00000588542 ZFPL1O95159 310 aa16.92■□□□□ 0.3
DDX39A-207ENST00000588542 LALBAP00709 142 aa16.92■□□□□ 0.3
DDX39A-207ENST00000588542 TGFAP01135 160 aa16.92■□□□□ 0.3
DDX39A-207ENST00000588542 ZNF12P17014 697 aa16.92■□□□□ 0.3
DDX39A-207ENST00000588542 EGR1P18146 543 aa16.92■□□□□ 0.3
DDX39A-207ENST00000588542 C21orf33P30042 268 aaPredicted RBP16.92■□□□□ 0.3
DDX39A-207ENST00000588542 CD80P33681 288 aa16.92■□□□□ 0.3
DDX39A-207ENST00000588542 CFHR2P36980 270 aa16.92■□□□□ 0.3
DDX39A-207ENST00000588542 GNG3P63215 75 aa16.92■□□□□ 0.3
DDX39A-207ENST00000588542 KCTD8Q6ZWB6 473 aa16.92■□□□□ 0.3
DDX39A-207ENST00000588542 MUC20Q8N307 709 aaPredicted RBP16.92■□□□□ 0.3
DDX39A-207ENST00000588542 SPICQ8N5J4 248 aa16.92■□□□□ 0.3
DDX39A-207ENST00000588542 ZNF676Q8N7Q3 588 aa16.92■□□□□ 0.3
DDX39A-207ENST00000588542 OR52N1Q8NH53 320 aa16.92■□□□□ 0.3
DDX39A-207ENST00000588542 HAVCR2Q8TDQ0 301 aa16.92■□□□□ 0.3
DDX39A-207ENST00000588542 ADAT3Q96EY9 351 aaPredicted RBP16.92■□□□□ 0.3
DDX39A-207ENST00000588542 OR51I2Q9H344 312 aa16.92■□□□□ 0.3
DDX39A-207ENST00000588542 PLEKHA1Q9HB21 404 aa16.92■□□□□ 0.3
DDX39A-207ENST00000588542 PCDHGB5Q9Y5G0 923 aa16.92■□□□□ 0.3
DDX39A-207ENST00000588542 CEACAM18A8MTB9 384 aa16.91■□□□□ 0.3
DDX39A-207ENST00000588542 A8MV72 311 aaPredicted RBP16.91■□□□□ 0.3
DDX39A-207ENST00000588542 UBE2V2Q15819 145 aa16.91■□□□□ 0.3
DDX39A-207ENST00000588542 FAM166AQ6J272 317 aa16.91■□□□□ 0.3
DDX39A-207ENST00000588542 STX19Q8N4C7 294 aa16.91■□□□□ 0.3
DDX39A-207ENST00000588542 BOLLQ8N9W6 283 aaKnown RBP16.91■□□□□ 0.3
DDX39A-207ENST00000588542 LRRC29Q8WV35 223 aa16.91■□□□□ 0.3
DDX39A-207ENST00000588542 GATAD2BQ8WXI9 593 aa16.91■□□□□ 0.3
DDX39A-207ENST00000588542 SGCDQ92629 289 aa16.91■□□□□ 0.3
DDX39A-207ENST00000588542 C10orf35Q96D05 121 aa16.91■□□□□ 0.3
DDX39A-207ENST00000588542 PDCD1LG2Q9BQ51 273 aa16.91■□□□□ 0.3
DDX39A-207ENST00000588542 LPAR2Q9HBW0 351 aa16.91■□□□□ 0.3
DDX39A-207ENST00000588542 PAK1IP1Q9NWT1 392 aaPredicted RBP16.91■□□□□ 0.3
DDX39A-207ENST00000588542 CHCHD3Q9NX63 227 aaKnown RBP16.91■□□□□ 0.3
DDX39A-207ENST00000588542 BABAM2Q9NXR7 383 aa16.91■□□□□ 0.3
DDX39A-207ENST00000588542 RAB26Q9ULW5 256 aa16.91■□□□□ 0.3
DDX39A-207ENST00000588542 HHLA2Q9UM44 414 aa16.91■□□□□ 0.3
DDX39A-207ENST00000588542 SIRT4Q9Y6E7 314 aaPredicted RBP16.91■□□□□ 0.3
DDX39A-207ENST00000588542 WNK2Q9Y3S1 2297 aa16.9■□□□□ 0.3
DDX39A-207ENST00000588542 TRBV2A0A0J9YWF9 115 aa16.9■□□□□ 0.3
DDX39A-207ENST00000588542 PQLC2LA1A4F0 135 aa16.9■□□□□ 0.3
DDX39A-207ENST00000588542 ANKRD61A6NGH8 418 aa16.9■□□□□ 0.3
DDX39A-207ENST00000588542 TMEM212A6NML5 194 aa16.9■□□□□ 0.3
DDX39A-207ENST00000588542 SRRM5B3KS81 715 aa16.9■□□□□ 0.3
DDX39A-207ENST00000588542 C3orf80F5H4A9 247 aa16.9■□□□□ 0.3
DDX39A-207ENST00000588542 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.9■□□□□ 0.3
DDX39A-207ENST00000588542 LGALS8O00214 317 aa16.9■□□□□ 0.3
DDX39A-207ENST00000588542 CDK1P06493 297 aa16.9■□□□□ 0.3
DDX39A-207ENST00000588542 MSMBP08118 114 aa16.9■□□□□ 0.3
DDX39A-207ENST00000588542 CCDC159P0C7I6 412 aa16.9■□□□□ 0.3
DDX39A-207ENST00000588542 MED21Q13503 144 aa16.9■□□□□ 0.3
DDX39A-207ENST00000588542 DOC2BQ14184 412 aa16.9■□□□□ 0.3
DDX39A-207ENST00000588542 CDK5R1Q15078 307 aa16.9■□□□□ 0.3
DDX39A-207ENST00000588542 CCDC58Q4VC31 144 aa16.9■□□□□ 0.3
DDX39A-207ENST00000588542 SFRP4Q6FHJ7 346 aaPredicted RBP16.9■□□□□ 0.3
DDX39A-207ENST00000588542 RPL22L1Q6P5R6 122 aaKnown RBP16.9■□□□□ 0.3
DDX39A-207ENST00000588542 DEFB108BQ8NET1 73 aa16.9■□□□□ 0.3
DDX39A-207ENST00000588542 OR5AK2Q8NH90 309 aa16.9■□□□□ 0.3
DDX39A-207ENST00000588542 FGGYQ96C11 551 aa16.9■□□□□ 0.3
DDX39A-207ENST00000588542 CHST5Q9GZS9 411 aa16.9■□□□□ 0.3
DDX39A-207ENST00000588542 ERVK-18Q9QC07 812 aa16.9■□□□□ 0.3
DDX39A-207ENST00000588542 PCDHB10Q9UN67 800 aa16.9■□□□□ 0.3
DDX39A-207ENST00000588542 OOEPA6NGQ2 149 aa16.89■□□□□ 0.29
DDX39A-207ENST00000588542 PTGES3LE9PB15 166 aa16.89■□□□□ 0.29
DDX39A-207ENST00000588542 TNFRSF13BO14836 293 aaPredicted RBP16.89■□□□□ 0.29
DDX39A-207ENST00000588542 OGG1O15527 345 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms