RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 TECTBQ96PL2 329 aa9.65□□□□□ -0.86
VMP1-207ENST00000588131 SORCS2Q96PQ0 1159 aa9.65□□□□□ -0.86
VMP1-207ENST00000588131 TSC22D3Q99576 134 aa9.65□□□□□ -0.86
VMP1-207ENST00000588131 ADAT1Q9BUB4 502 aaKnown RBP9.65□□□□□ -0.86
VMP1-207ENST00000588131 ZNF442Q9H7R0 627 aa9.65□□□□□ -0.86
VMP1-207ENST00000588131 ABCB9Q9NP78 766 aa9.65□□□□□ -0.86
VMP1-207ENST00000588131 PLA2G2EQ9NZK7 142 aa9.65□□□□□ -0.86
VMP1-207ENST00000588131 ABRACLQ9P1F3 81 aa9.65□□□□□ -0.86
VMP1-207ENST00000588131 OR5V1Q9UGF6 321 aa9.65□□□□□ -0.86
VMP1-207ENST00000588131 POU2F3Q9UKI9 436 aa9.65□□□□□ -0.86
VMP1-207ENST00000588131 SLC7A11Q9UPY5 501 aa9.65□□□□□ -0.86
VMP1-207ENST00000588131 CMAHPQ9Y471 501 aa9.65□□□□□ -0.86
VMP1-207ENST00000588131 RNF115Q9Y4L5 304 aa9.65□□□□□ -0.86
VMP1-207ENST00000588131 MPC1Q9Y5U8 109 aa9.65□□□□□ -0.86
VMP1-207ENST00000588131 HEATR1Q9H583 2144 aaKnown RBP9.65□□□□□ -0.86
VMP1-207ENST00000588131 GCN1Q92616 2671 aaKnown RBP9.65□□□□□ -0.87
VMP1-207ENST00000588131 PQLC2LA1A4F0 135 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 ZNF732B4DXR9 585 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 RGS5O15539 181 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 MLNRO43193 412 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 CALCBP10092 127 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 PLA2G2AP14555 144 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 RBP2P50120 134 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 FUT6P51993 359 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 MTCP1P56278 107 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 ZP1P60852 638 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 DYNC1I2Q13409 638 aaKnown RBP9.64□□□□□ -0.87
VMP1-207ENST00000588131 MZT2AQ6P582 158 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 LHFPL2Q6ZUX7 228 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 WDR86Q86TI4 376 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 OR51D1Q8NGF3 324 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 OR5A2Q8NGI9 324 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 LILRB1Q8NHL6 650 aaPredicted RBP9.64□□□□□ -0.87
VMP1-207ENST00000588131 FAM3DQ96BQ1 224 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 RNF170Q96K19 258 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 GPER1Q99527 375 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 UQCC2Q9BRT2 126 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 TMEM204Q9BSN7 226 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 MSL2Q9HCI7 577 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 TMEM100Q9NV29 134 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 TAAR3PQ9P1P4 343 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 MRPS28Q9Y2Q9 187 aaKnown RBP9.64□□□□□ -0.87
VMP1-207ENST00000588131 PEX16Q9Y5Y5 336 aa9.64□□□□□ -0.87
VMP1-207ENST00000588131 ZSCAN5BA6NJL1 495 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 SPRY1O43609 319 aaPredicted RBP9.63□□□□□ -0.87
VMP1-207ENST00000588131 TMEM127O75204 238 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 PLATP00750 562 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 EIF4EP06730 217 aaKnown RBP9.63□□□□□ -0.87
VMP1-207ENST00000588131 OR4A8P0C604 315 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 BMP4P12644 408 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 TNFSF8P32971 234 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 PEX19P40855 299 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 POU3F4P49335 361 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 GPM6AP51674 278 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 ATP1B3P54709 279 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 RIN1Q13671 783 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 OR8G1Q15617 311 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 C2orf76Q3KRA6 126 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 AWAT2Q6E213 333 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 OR10K2Q6IF99 312 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 GLIPR1L1Q6UWM5 242 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 C1QL2Q7Z5L3 287 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 ANGPTL5Q86XS5 388 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 CALHM1Q8IU99 346 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 SAMD12Q8N8I0 201 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 ACBD4Q8NC06 268 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 OR10AD1Q8NGE0 317 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 OR8S1Q8NH09 359 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 FAM222BQ8WU58 562 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 TNFAIP8L1Q8WVP5 186 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 ZDHHC16Q969W1 377 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 SLC25A38Q96DW6 304 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 C1orf147Q96MC9 270 aaPredicted RBP9.63□□□□□ -0.87
VMP1-207ENST00000588131 HIST1H2AAQ96QV6 131 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 MICU1Q9BPX6 476 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 NEK6Q9HC98 313 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 SPATA2Q9UM82 520 aa9.63□□□□□ -0.87
VMP1-207ENST00000588131 LOC100289279A0A1B0GTE1 492 aa9.62□□□□□ -0.87
VMP1-207ENST00000588131 TMEM272A0A1B0GTI8 110 aa9.62□□□□□ -0.87
VMP1-207ENST00000588131 A0A1B0GWJ7 208 aa9.62□□□□□ -0.87
VMP1-207ENST00000588131 OR5B21A6NL26 309 aa9.62□□□□□ -0.87
VMP1-207ENST00000588131 F5H5P2 479 aa9.62□□□□□ -0.87
VMP1-207ENST00000588131 LDLRAD4O15165 306 aa9.62□□□□□ -0.87
VMP1-207ENST00000588131 ANGPTL7O43827 346 aa9.62□□□□□ -0.87
VMP1-207ENST00000588131 INHBBP09529 407 aa9.62□□□□□ -0.87
VMP1-207ENST00000588131 NAT2P11245 290 aa9.62□□□□□ -0.87
VMP1-207ENST00000588131 ARSBP15848 533 aa9.62□□□□□ -0.87
VMP1-207ENST00000588131 ELK1P19419 428 aa9.62□□□□□ -0.87
VMP1-207ENST00000588131 S100A5P33763 92 aa9.62□□□□□ -0.87
VMP1-207ENST00000588131 PTGFRP43088 359 aa9.62□□□□□ -0.87
VMP1-207ENST00000588131 EFNB2P52799 333 aa9.62□□□□□ -0.87
VMP1-207ENST00000588131 QRFPP83859 136 aa9.62□□□□□ -0.87
VMP1-207ENST00000588131 MADCAM1Q13477 382 aa9.62□□□□□ -0.87
VMP1-207ENST00000588131 MEX3BQ6ZN04 569 aaKnown RBP9.62□□□□□ -0.87
VMP1-207ENST00000588131 LINC00299Q6ZSB3 139 aa9.62□□□□□ -0.87
VMP1-207ENST00000588131 BIVMQ86UB2 503 aa9.62□□□□□ -0.87
VMP1-207ENST00000588131 MFSD4AQ8N468 514 aa9.62□□□□□ -0.87
VMP1-207ENST00000588131 DTX3Q8N9I9 347 aa9.62□□□□□ -0.87
VMP1-207ENST00000588131 PNLDC1Q8NA58 520 aaKnown RBP9.62□□□□□ -0.87
VMP1-207ENST00000588131 WDFY2Q96P53 400 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms