RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 GDPGP1Q6ZNW5 385 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 PRSS45Q7RTY3 260 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 CBR4Q8N4T8 237 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 SPERTQ8NA61 448 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 H1FXQ92522 213 aaKnown RBP9.51□□□□□ -0.89
LIG3-207ENST00000586119 RORBQ92753 470 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 RPL3LQ92901 407 aaKnown RBP9.51□□□□□ -0.89
LIG3-207ENST00000586119 ITPKCQ96DU7 683 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 RDH12Q96NR8 316 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 AMELYQ99218 206 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 DCTN5Q9BTE1 182 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 GABARAPL3Q9BY60 117 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 PRRG3Q9BZD7 231 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 PPA2Q9H2U2 334 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 MED20Q9H944 212 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 ELL3Q9HB65 397 aaPredicted RBP9.51□□□□□ -0.89
LIG3-207ENST00000586119 SLC25A19Q9HC21 320 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 BRD7Q9NPI1 651 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 TRIM36Q9NQ86 728 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 C14orf119Q9NWQ9 140 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 DNAJC27Q9NZQ0 273 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 KCNG2Q9UJ96 466 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 VPREB3Q9UKI3 123 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 FOXJ3Q9UPW0 622 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 NOP16Q9Y3C1 178 aaKnown RBP9.51□□□□□ -0.89
LIG3-207ENST00000586119 NOTCH3Q9UM47 2321 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.5□□□□□ -0.89
LIG3-207ENST00000586119 MEGF11A6BM72 1044 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 EI24O14681 340 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 NDUFB3O43676 98 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 SOX14O95416 240 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 IFNGP01579 166 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 ANXA2P07355 339 aaKnown RBP9.5□□□□□ -0.89
LIG3-207ENST00000586119 FBP1P09467 338 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 CSF1P09603 554 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 MUC1P15941 1255 aaPredicted RBP9.5□□□□□ -0.89
LIG3-207ENST00000586119 GRK5P34947 590 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 CDK5Q00535 292 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 EIF2B1Q14232 305 aaKnown RBP9.5□□□□□ -0.89
LIG3-207ENST00000586119 LY6EQ16553 131 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 DGUOKQ16854 277 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 GFOD2Q3B7J2 385 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 BEAN1Q3B7T3 259 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 DMRTC1Q5HYR2 192 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 OGFRL1Q5TC84 451 aaPredicted RBP9.5□□□□□ -0.89
LIG3-207ENST00000586119 LINC01590Q5TEZ4 76 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 HCP5Q6MZN7 132 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 C1orf122Q6ZSJ8 110 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 FAM57BQ71RH2 274 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 LYG1Q8N1E2 194 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 OR2T4Q8NH00 348 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 REEP6Q96HR9 211 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 AJUBAQ96IF1 538 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 NMNAT2Q9BZQ4 307 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 VCXQ9H320 206 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 ZNF391Q9UJN7 358 aa9.5□□□□□ -0.89
LIG3-207ENST00000586119 hCG_38984A0A1B0GV85 526 aa9.49□□□□□ -0.89
LIG3-207ENST00000586119 MEIOCA2RUB1 952 aa9.49□□□□□ -0.89
LIG3-207ENST00000586119 ZAR1LA6NP61 321 aa9.49□□□□□ -0.89
LIG3-207ENST00000586119 AKR7A2O43488 359 aa9.49□□□□□ -0.89
LIG3-207ENST00000586119 XRCC2O43543 280 aa9.49□□□□□ -0.89
LIG3-207ENST00000586119 SPI1P17947 270 aa9.49□□□□□ -0.89
LIG3-207ENST00000586119 POU1F1P28069 291 aa9.49□□□□□ -0.89
LIG3-207ENST00000586119 FMO3P31513 532 aa9.49□□□□□ -0.89
LIG3-207ENST00000586119 SAA4P35542 130 aa9.49□□□□□ -0.89
LIG3-207ENST00000586119 DDOSTP39656 456 aa9.49□□□□□ -0.89
LIG3-207ENST00000586119 GSK3AP49840 483 aa9.49□□□□□ -0.89
LIG3-207ENST00000586119 ZNF121P58317 390 aaPredicted RBP9.49□□□□□ -0.89
LIG3-207ENST00000586119 ERVFRD-1P60508 538 aa9.49□□□□□ -0.89
LIG3-207ENST00000586119 GINS1Q14691 196 aa9.49□□□□□ -0.89
LIG3-207ENST00000586119 PTGES3Q15185 160 aaKnown RBP9.49□□□□□ -0.89
LIG3-207ENST00000586119 TIGD6Q17RP2 521 aa9.49□□□□□ -0.89
LIG3-207ENST00000586119 STUMQ69YW2 141 aa9.49□□□□□ -0.89
LIG3-207ENST00000586119 METAP1DQ6UB28 335 aaPredicted RBP9.49□□□□□ -0.89
LIG3-207ENST00000586119 SLC36A1Q7Z2H8 476 aa9.49□□□□□ -0.89
LIG3-207ENST00000586119 GAFA1Q96PS6 74 aa9.49□□□□□ -0.89
LIG3-207ENST00000586119 SLC29A1Q99808 456 aa9.49□□□□□ -0.89
LIG3-207ENST00000586119 VCX3BQ9H321 246 aa9.49□□□□□ -0.89
LIG3-207ENST00000586119 TOR3AQ9H497 397 aa9.49□□□□□ -0.89
LIG3-207ENST00000586119 SP140LQ9H930 580 aa9.49□□□□□ -0.89
LIG3-207ENST00000586119 HAO2Q9NYQ3 351 aa9.49□□□□□ -0.89
LIG3-207ENST00000586119 ANKRD61A6NGH8 418 aa9.48□□□□□ -0.89
LIG3-207ENST00000586119 FAM183AA6NL82 134 aa9.48□□□□□ -0.89
LIG3-207ENST00000586119 RIIAD1A6NNX1 92 aa9.48□□□□□ -0.89
LIG3-207ENST00000586119 ZNF850A8MQ14 1090 aa9.48□□□□□ -0.89
LIG3-207ENST00000586119 ZNF878C9JN71 531 aa9.48□□□□□ -0.89
LIG3-207ENST00000586119 H0YJX3 145 aa9.48□□□□□ -0.89
LIG3-207ENST00000586119 H3BUX3 64 aa9.48□□□□□ -0.89
LIG3-207ENST00000586119 MITFO75030 526 aaPredicted RBP9.48□□□□□ -0.89
LIG3-207ENST00000586119 RHBDL1O75783 438 aa9.48□□□□□ -0.89
LIG3-207ENST00000586119 ATP6V1G2O95670 118 aa9.48□□□□□ -0.89
LIG3-207ENST00000586119 ACKR3P25106 362 aa9.48□□□□□ -0.89
LIG3-207ENST00000586119 TGFBR2P37173 567 aa9.48□□□□□ -0.89
LIG3-207ENST00000586119 MZT1Q08AG7 82 aa9.48□□□□□ -0.89
LIG3-207ENST00000586119 C11orf91Q3C1V1 193 aa9.48□□□□□ -0.89
LIG3-207ENST00000586119 TEX30Q5JUR7 227 aa9.48□□□□□ -0.89
LIG3-207ENST00000586119 ATPAF1Q5TC12 328 aaPredicted RBP9.48□□□□□ -0.89
LIG3-207ENST00000586119 SLX4IPQ5VYV7 408 aa9.48□□□□□ -0.89
LIG3-207ENST00000586119 ZNF788Q6ZQV5 615 aa9.48□□□□□ -0.89
LIG3-207ENST00000586119 OR6K6Q8NGW6 343 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms