RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 SLC41A3Q96GZ6 507 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC35G5Q96KT7 338 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 PRRC1Q96M27 445 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 TSSK3Q96PN8 268 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 KCNS3Q9BQ31 491 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 WDR13Q9H1Z4 485 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 NIPAL2Q9H841 368 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 ZDHHC11Q9H8X9 412 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 EFCAB1Q9HAE3 211 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 GALPQ9UBC7 116 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC23A2Q9UGH3 650 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 CD84Q9UIB8 345 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 GSTK1Q9Y2Q3 226 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 ASB4Q9Y574 426 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 CMYA5Q8N3K9 4069 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 ABCA2Q9BZC7 2435 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 RYR3Q15413 4870 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 A0A087WW49 117 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 IGKV3D-20A0A0C4DH25 116 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 IGHV5-51A0A0C4DH38 117 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 LRP5LA4QPB2 252 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 FTCDNL1E5RQL4 147 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 UBDO15205 165 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 EEDO75530 441 aaKnown RBP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 GLSO94925 669 aaPredicted RBP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 OR5F1O95221 314 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 EPPINO95925 133 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 CLPTM1O96005 669 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 CSTAP01040 98 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 IGKV3-11P04433 115 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 NPR2P20594 1047 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 MAGP20916 626 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 MSR1P21757 451 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 CCNOP22674 350 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 AK4P27144 223 aaPredicted RBP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 IL12AP29459 219 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 CA7P43166 264 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 XCR1P46094 333 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 NCALDP61601 193 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 ARL6IP1Q15041 203 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 KCNJ8Q15842 424 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 C2CD6Q53TS8 623 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 VWA2Q5GFL6 755 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 ANKRD22Q5VYY1 191 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 PWWP2BQ6NUJ5 590 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 NOXRED1Q6NXP6 359 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 Q6ZSR9 355 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 GRINAQ7Z429 371 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 PLCZ1Q86YW0 608 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 OR11G2Q8NGC1 345 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 OR4K17Q8NGC6 315 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 OR5AP2Q8NGF4 316 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 OR9A2Q8NGT5 310 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 RNASE6Q93091 150 aaKnown RBP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 GMPPAQ96IJ6 420 aaPredicted RBP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 CHCHD5Q9BSY4 110 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 RBM4Q9BWF3 364 aaKnown RBP1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 TAPBPLQ9BX59 468 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 ACTR6Q9GZN1 396 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 CXorf21Q9HAI6 301 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 TMEM27Q9HBJ8 222 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF226Q9NYT6 803 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 ONECUT1Q9UBC0 465 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 RPS6KB2Q9UBS0 482 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 EMCNQ9ULC0 261 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 PYCARDQ9ULZ3 195 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 TIMM10BQ9Y5J6 103 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 DSPPQ9NZW4 1301 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 IGF2RP11717 2491 aa1.6□□□□□ -2.15
SMCHD1-211ENST00000584897 LOC100506127A0A0U1RQW1 187 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 A0A1W2PP18 115 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 GNG14A0A1W2PPG7 69 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 H0YJX3 145 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 TEX46H3BTG2 121 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 GOSR2O14653 212 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 HAT1O14929 419 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 P2RX6O15547 441 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 GPRIN2O60269 458 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 CCNB2O95067 398 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 IFNA16P05015 189 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 BCKDHAP12694 445 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 PRKACAP17612 351 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 VDAC1P21796 283 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 PTBP1P26599 531 aaKnown RBP eCLIP1.59□□□□□ -2.153e-54■■■■■ 82.8
SMCHD1-211ENST00000584897 HTR1FP30939 366 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 POLR2HP52434 150 aaKnown RBP1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 CDKN2DP55273 166 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 PRPS1P60891 318 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 DSTNP60981 165 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 KCNJ2P63252 427 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 BTN3A2P78410 334 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 VLDLRP98155 873 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 PLGLB1Q02325 96 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 TLE4Q04727 773 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 CHRNB3Q05901 458 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 C2orf80Q0P641 193 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 PLCXD2Q0VAA5 305 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 C1orf61Q13536 156 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 CASP8Q14790 479 aa1.59□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF791Q3KP31 576 aaPredicted RBP1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 526.4 ms