RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 CSTAP01040 98 aa2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 RHOCP08134 193 aa2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 MMP7P09237 267 aaPredicted RBP2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 OR5AL1P0C617 328 aa2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 MTPNP58546 118 aa2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 DMC1Q14565 340 aa2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 MAPRE2Q15555 327 aa2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 LY6EQ16553 131 aa2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 C16orf87Q6PH81 154 aa2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 IGFL1Q6UW32 110 aa2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 LYPD1Q8N2G4 141 aa2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 RNF10Q8N5U6 811 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 LRRC52Q8N7C0 313 aa2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 SLC25A29Q8N8R3 303 aa2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 ST20-AS1Q8NBB2 130 aa2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 OR2Z1Q8NG97 314 aa2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 OR5M1Q8NGP8 315 aa2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 ING5Q8WYH8 240 aa2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 TFGQ92734 400 aaPredicted RBP2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 TMEM159Q96B96 161 aa2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 RNF170Q96K19 258 aa2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 Q96MT0 163 aa2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 ALS2CR12Q96Q35 445 aa2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 NAPGQ99747 312 aaPredicted RBP2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 ZNF2Q9BSG1 426 aaPredicted RBP2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 FRMD8P1Q9BZ68 369 aaPredicted RBP2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 STMN4Q9H169 189 aaPredicted RBP2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 CSNK1G1Q9HCP0 422 aa2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 RBFOX1Q9NWB1 397 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 SLC7A11Q9UPY5 501 aa2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 MYO10Q9HD67 2058 aa2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 TRAV8-6A0A0B4J262 113 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 A8MWL6 223 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 SEC14L6B5MCN3 397 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 RPL36A-HNRNPH2H7BZ11 118 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 PRMT5O14744 637 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 ALOX12BO75342 701 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 TRAPPC6AO75865 159 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 CDRT1O95170 752 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 MAS1P04201 325 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 RPN2P04844 631 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 PTNP21246 168 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 PRKACBP22694 351 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 MPV17P39210 176 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 PSMB2P49721 201 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 PPP1CAP62136 330 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 BTN1A1Q13410 526 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 VAMP3Q15836 100 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 CDNFQ49AH0 187 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 DUPD1Q68J44 220 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 SLC25A25Q6KCM7 469 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 SLC25A34Q6PIV7 304 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 ASCL4Q6XD76 172 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 ZNF101Q8IZC7 436 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 OSR2Q8N2R0 312 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 ZNF561Q8N587 486 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 SLC35G3Q8N808 338 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 TMEM105Q8N8V8 129 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 OR4A15Q8NGL6 344 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 ZNF75CPQ92670 426 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 CENPNQ96H22 339 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 TBL1XR1Q9BZK7 514 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 VCX3AQ9NNX9 186 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 VAX2Q9UIW0 290 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 SYNRGQ9UMZ2 1314 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 TNIKQ9UKE5 1360 aa2.1□□□□□ -2.07
SMCHD1-209ENST00000583441 IGHV6-1A0A0B4J1U7 121 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 IGKV6-21A0A0C4DH24 114 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 SPRR5A0A1B0GTR4 108 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 ISPDA4D126 451 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 BTNL10A8MVZ5 291 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 ZNF593O00488 134 aaPredicted RBP2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 SPOPO43791 374 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 OR7C2O60412 319 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 CCDC22O60826 627 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 S100A9P06702 114 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 NELFEP18615 380 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 GNRHRP30968 328 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 MPIP34949 423 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 MLF1P58340 268 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 TAS2R43P59537 309 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 ADIGQ0VDE8 80 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 LAMTOR4Q0VGL1 99 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 FUT5Q11128 374 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 TOMM34Q15785 309 aaPredicted RBP2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 HHATQ5VTY9 493 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 PRSS54Q6PEW0 395 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 DEGS2Q6QHC5 323 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 ORMDL3Q8N138 153 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 ASCC1Q8N9N2 400 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 OR6N2Q8NGY6 317 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 OR51A7Q8NH64 312 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 CPNE4Q96A23 557 aaPredicted RBP2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 S100PBPQ96BU1 408 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 RMI2Q96E14 147 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 IP6K3Q96PC2 410 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 ULBP2Q9BZM5 246 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 API5Q9BZZ5 524 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 RAB23Q9ULC3 237 aa2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 TFR2Q9UP52 801 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms