RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 LRRC10Q5BKY1 277 aa10.04□□□□□ -0.8
TOP3A-215ENST00000583328 DEFB121Q5J5C9 76 aa10.04□□□□□ -0.8
TOP3A-215ENST00000583328 WDR38Q5JTN6 314 aa10.04□□□□□ -0.8
TOP3A-215ENST00000583328 ZBTB37Q5TC79 503 aa10.04□□□□□ -0.8
TOP3A-215ENST00000583328 SLC18B1Q6NT16 456 aa10.04□□□□□ -0.8
TOP3A-215ENST00000583328 CFAP77Q6ZQR2 320 aa10.04□□□□□ -0.8
TOP3A-215ENST00000583328 ZBTB49Q6ZSB9 765 aa10.04□□□□□ -0.8
TOP3A-215ENST00000583328 IQCF1Q8N6M8 205 aa10.04□□□□□ -0.8
TOP3A-215ENST00000583328 FAM216BQ8N7L0 139 aa10.04□□□□□ -0.8
TOP3A-215ENST00000583328 SDR9C7Q8NEX9 313 aa10.04□□□□□ -0.8
TOP3A-215ENST00000583328 OR4F17Q8NGA8 305 aa10.04□□□□□ -0.8
TOP3A-215ENST00000583328 OR51G2Q8NGK0 314 aa10.04□□□□□ -0.8
TOP3A-215ENST00000583328 H1FXQ92522 213 aaKnown RBP10.04□□□□□ -0.8
TOP3A-215ENST00000583328 TNFRSF14Q92956 283 aa10.04□□□□□ -0.8
TOP3A-215ENST00000583328 OR4F4Q96R69 305 aa10.04□□□□□ -0.8
TOP3A-215ENST00000583328 NMNAT3Q96T66 252 aa10.04□□□□□ -0.8
TOP3A-215ENST00000583328 DCTN5Q9BTE1 182 aa10.04□□□□□ -0.8
TOP3A-215ENST00000583328 GABARAPL3Q9BY60 117 aa10.04□□□□□ -0.8
TOP3A-215ENST00000583328 RANBP3Q9H6Z4 567 aaPredicted RBP10.04□□□□□ -0.8
TOP3A-215ENST00000583328 SRA1Q9HD15 236 aaKnown RBP10.04□□□□□ -0.8
TOP3A-215ENST00000583328 CMC2Q9NRP2 79 aa10.04□□□□□ -0.8
TOP3A-215ENST00000583328 C14orf119Q9NWQ9 140 aa10.04□□□□□ -0.8
TOP3A-215ENST00000583328 MRPL15Q9P015 296 aaKnown RBP10.04□□□□□ -0.8
TOP3A-215ENST00000583328 B9D1Q9UPM9 204 aa10.04□□□□□ -0.8
TOP3A-215ENST00000583328 RYR3Q15413 4870 aa10.03□□□□□ -0.8
TOP3A-215ENST00000583328 OR6C68A6NDL8 312 aa10.03□□□□□ -0.8
TOP3A-215ENST00000583328 M0R135 149 aa10.03□□□□□ -0.8
TOP3A-215ENST00000583328 DCTN6O00399 190 aa10.03□□□□□ -0.8
TOP3A-215ENST00000583328 CASQ2O14958 399 aaPredicted RBP10.03□□□□□ -0.8
TOP3A-215ENST00000583328 CD28P10747 220 aa10.03□□□□□ -0.8
TOP3A-215ENST00000583328 MUC1P15941 1255 aaPredicted RBP10.03□□□□□ -0.8
TOP3A-215ENST00000583328 ZNF3P17036 446 aa10.03□□□□□ -0.8
TOP3A-215ENST00000583328 PTGES3Q15185 160 aaKnown RBP10.03□□□□□ -0.8
TOP3A-215ENST00000583328 PCK2Q16822 640 aa10.03□□□□□ -0.8
TOP3A-215ENST00000583328 NCR3LG1Q68D85 454 aa10.03□□□□□ -0.8
TOP3A-215ENST00000583328 SLC37A3Q8NCC5 494 aa10.03□□□□□ -0.8
TOP3A-215ENST00000583328 OR2AE1Q8NHA4 323 aa10.03□□□□□ -0.8
TOP3A-215ENST00000583328 LRRC29Q8WV35 223 aa10.03□□□□□ -0.8
TOP3A-215ENST00000583328 RORBQ92753 470 aa10.03□□□□□ -0.8
TOP3A-215ENST00000583328 ZNF799Q96GE5 643 aa10.03□□□□□ -0.8
TOP3A-215ENST00000583328 DDOQ99489 341 aa10.03□□□□□ -0.8
TOP3A-215ENST00000583328 NKX3-1Q99801 234 aaPredicted RBP10.03□□□□□ -0.8
TOP3A-215ENST00000583328 SLC29A1Q99808 456 aa10.03□□□□□ -0.8
TOP3A-215ENST00000583328 PRRG3Q9BZD7 231 aa10.03□□□□□ -0.8
TOP3A-215ENST00000583328 NPFFR1Q9GZQ6 430 aa10.03□□□□□ -0.8
TOP3A-215ENST00000583328 RIBC2Q9H4K1 309 aa10.03□□□□□ -0.8
TOP3A-215ENST00000583328 RNPEPL1Q9HAU8 725 aa10.03□□□□□ -0.8
TOP3A-215ENST00000583328 RPRD1BQ9NQG5 326 aaKnown RBP10.03□□□□□ -0.8
TOP3A-215ENST00000583328 C8orf4Q9NR00 106 aa10.03□□□□□ -0.8
TOP3A-215ENST00000583328 SF3B6Q9Y3B4 125 aaKnown RBP10.03□□□□□ -0.8
TOP3A-215ENST00000583328 ZAR1LA6NP61 321 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 K7EIL1 84 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 HLA-DQA2P01906 255 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 IGLL1P15814 213 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 CD33P20138 364 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 PEX2P28328 305 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 BLMHQ13867 455 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 CRMP1Q14194 572 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 LRRC75BQ2VPJ9 315 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 SNAI3Q3KNW1 292 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 SLX4IPQ5VYV7 408 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 TMEM236Q5W0B7 351 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 ZBTB46Q86UZ6 589 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 NDUFA11Q86Y39 141 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 OR6V1Q8N148 313 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 PACRGLQ8N7B6 248 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 CYB561A3Q8NBI2 242 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 OR9Q1Q8NGQ5 310 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 OR2T4Q8NH00 348 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 OR8S1Q8NH09 359 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 C17orf50Q8WW18 174 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 SPTSSAQ969W0 71 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 SEH1LQ96EE3 360 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 WWC2-AS2Q96NR7 200 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 FN3KQ9H479 309 aa10.02□□□□□ -0.81
TOP3A-215ENST00000583328 METTL8Q9H825 291 aaKnown RBP10.02□□□□□ -0.81
TOP3A-215ENST00000583328 DNAH3Q8TD57 4116 aa10.01□□□□□ -0.81
TOP3A-215ENST00000583328 IGLV1-36A0A0B4J1U3 117 aa10.01□□□□□ -0.81
TOP3A-215ENST00000583328 A0A1W2PQ09 198 aa10.01□□□□□ -0.81
TOP3A-215ENST00000583328 M0R1W7 72 aa10.01□□□□□ -0.81
TOP3A-215ENST00000583328 PAICSP22234 425 aaKnown RBP10.01□□□□□ -0.81
TOP3A-215ENST00000583328 EPHA2P29317 976 aa10.01□□□□□ -0.81
TOP3A-215ENST00000583328 NAA10P41227 235 aaPredicted RBP10.01□□□□□ -0.81
TOP3A-215ENST00000583328 TGM4P49221 684 aa10.01□□□□□ -0.81
TOP3A-215ENST00000583328 SLC25A1P53007 311 aa10.01□□□□□ -0.81
TOP3A-215ENST00000583328 SLC34A1Q06495 639 aa10.01□□□□□ -0.81
TOP3A-215ENST00000583328 RIPK1Q13546 671 aa10.01□□□□□ -0.81
TOP3A-215ENST00000583328 SNAPC1Q16533 368 aa10.01□□□□□ -0.81
TOP3A-215ENST00000583328 GLYATL3Q5SZD4 288 aa10.01□□□□□ -0.81
TOP3A-215ENST00000583328 OGFRL1Q5TC84 451 aaPredicted RBP10.01□□□□□ -0.81
TOP3A-215ENST00000583328 LPCAT4Q643R3 524 aa10.01□□□□□ -0.81
TOP3A-215ENST00000583328 C12orf73Q69YU5 71 aa10.01□□□□□ -0.81
TOP3A-215ENST00000583328 CCBE1Q6UXH8 406 aaPredicted RBP10.01□□□□□ -0.81
TOP3A-215ENST00000583328 DPY19L4Q7Z388 723 aa10.01□□□□□ -0.81
TOP3A-215ENST00000583328 C11orf53Q8IXP5 236 aa10.01□□□□□ -0.81
TOP3A-215ENST00000583328 SLC26A10Q8NG04 563 aa10.01□□□□□ -0.81
TOP3A-215ENST00000583328 OR5T2Q8NGG2 359 aa10.01□□□□□ -0.81
TOP3A-215ENST00000583328 OR56B2PQ8NGI1 322 aa10.01□□□□□ -0.81
TOP3A-215ENST00000583328 C8orf46Q8TAG6 207 aa10.01□□□□□ -0.81
TOP3A-215ENST00000583328 RDH12Q96NR8 316 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms