RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 TGFBR2P37173 567 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 ZNF92Q03936 586 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 EGR3Q06889 387 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 IL18R1Q13478 541 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 APOFQ13790 326 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 LRRC36Q1X8D7 754 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 MEDAGQ5VYS4 303 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 TEX36Q5VZQ5 186 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 METAP1DQ6UB28 335 aaPredicted RBP11.15□□□□□ -0.62
SS18-222ENST00000582792 ZNF826PQ6ZT77 177 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 TIGD4Q8IY51 512 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 DHRSXQ8N5I4 330 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 ZNF454Q8N9F8 522 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 SPERTQ8NA61 448 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 ZNF511Q8NB15 262 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 OR51L1Q8NGJ5 315 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 OR6K6Q8NGW6 343 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 FAM81AQ8TBF8 368 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 ST8SIA4Q92187 359 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 OTULINQ96BN8 352 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 ZNF799Q96GE5 643 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 INTS14Q96SY0 518 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 IMPAD1Q9NX62 359 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 MRPL15Q9P015 296 aaKnown RBP11.15□□□□□ -0.62
SS18-222ENST00000582792 WARS2Q9UGM6 360 aaKnown RBP11.15□□□□□ -0.62
SS18-222ENST00000582792 GGT3PA6NGU5 568 aa11.14□□□□□ -0.63
SS18-222ENST00000582792 TVP23AA6NH52 213 aa11.14□□□□□ -0.63
SS18-222ENST00000582792 A6NLC8 198 aa11.14□□□□□ -0.63
SS18-222ENST00000582792 ZNF593O00488 134 aaPredicted RBP11.14□□□□□ -0.63
SS18-222ENST00000582792 ALX3O95076 343 aa11.14□□□□□ -0.63
SS18-222ENST00000582792 GRPP07492 148 aa11.14□□□□□ -0.63
SS18-222ENST00000582792 HTR1FP30939 366 aa11.14□□□□□ -0.63
SS18-222ENST00000582792 ADARB1P78563 741 aaKnown RBP11.14□□□□□ -0.63
SS18-222ENST00000582792 DBPQ10586 325 aaPredicted RBP11.14□□□□□ -0.63
SS18-222ENST00000582792 SNAI3Q3KNW1 292 aa11.14□□□□□ -0.63
SS18-222ENST00000582792 KLHL12Q53G59 568 aa11.14□□□□□ -0.63
SS18-222ENST00000582792 KPRPQ5T749 579 aaPredicted RBP11.14□□□□□ -0.63
SS18-222ENST00000582792 FGFRL1Q8N441 504 aa11.14□□□□□ -0.63
SS18-222ENST00000582792 LY6G5BQ8NDX9 201 aa11.14□□□□□ -0.63
SS18-222ENST00000582792 BBS1Q8NFJ9 593 aa11.14□□□□□ -0.63
SS18-222ENST00000582792 OR2AE1Q8NHA4 323 aa11.14□□□□□ -0.63
SS18-222ENST00000582792 RHOXF1Q8NHV9 184 aa11.14□□□□□ -0.63
SS18-222ENST00000582792 RFKQ969G6 155 aa11.14□□□□□ -0.63
SS18-222ENST00000582792 MAP6Q96JE9 813 aa11.14□□□□□ -0.63
SS18-222ENST00000582792 DMRTB1Q96MA1 342 aa11.14□□□□□ -0.63
SS18-222ENST00000582792 IL4I1Q96RQ9 567 aa11.14□□□□□ -0.63
SS18-222ENST00000582792 MNTQ99583 582 aa11.14□□□□□ -0.63
SS18-222ENST00000582792 APOL4Q9BPW4 351 aa11.14□□□□□ -0.63
SS18-222ENST00000582792 YIPF3Q9GZM5 350 aa11.14□□□□□ -0.63
SS18-222ENST00000582792 ONECUT1Q9UBC0 465 aa11.14□□□□□ -0.63
SS18-222ENST00000582792 HSPE1-MOB4S4R3N1 261 aa11.14□□□□□ -0.63
SS18-222ENST00000582792 IGHV3OR15-7A0A075B7D8 119 aa11.13□□□□□ -0.63
SS18-222ENST00000582792 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.13□□□□□ -0.63
SS18-222ENST00000582792 hCG_1807616A0A1W2PRN6 198 aa11.13□□□□□ -0.63
SS18-222ENST00000582792 SNTNA6NMZ2 147 aa11.13□□□□□ -0.63
SS18-222ENST00000582792 OPN1MWP04001 364 aa11.13□□□□□ -0.63
SS18-222ENST00000582792 OPN1MW2P0DN77 364 aa11.13□□□□□ -0.63
SS18-222ENST00000582792 OPN1MW3P0DN78 364 aa11.13□□□□□ -0.63
SS18-222ENST00000582792 GABRB1P18505 474 aa11.13□□□□□ -0.63
SS18-222ENST00000582792 ANOS1P23352 680 aa11.13□□□□□ -0.63
SS18-222ENST00000582792 OTX1P32242 354 aaPredicted RBP11.13□□□□□ -0.63
SS18-222ENST00000582792 RPS7P62081 194 aaKnown RBP11.13□□□□□ -0.63
SS18-222ENST00000582792 MZT1Q08AG7 82 aa11.13□□□□□ -0.63
SS18-222ENST00000582792 POU4F2Q12837 409 aa11.13□□□□□ -0.63
SS18-222ENST00000582792 GLYATL3Q5SZD4 288 aa11.13□□□□□ -0.63
SS18-222ENST00000582792 SAMD5Q5TGI4 173 aa11.13□□□□□ -0.63
SS18-222ENST00000582792 Q6ZPA2 131 aa11.13□□□□□ -0.63
SS18-222ENST00000582792 SLC16A9Q7RTY1 509 aa11.13□□□□□ -0.63
SS18-222ENST00000582792 ERI1Q8IV48 349 aaKnown RBP11.13□□□□□ -0.63
SS18-222ENST00000582792 SETD9Q8NE22 299 aa11.13□□□□□ -0.63
SS18-222ENST00000582792 NRG4Q8WWG1 115 aa11.13□□□□□ -0.63
SS18-222ENST00000582792 SPTSSAQ969W0 71 aa11.13□□□□□ -0.63
SS18-222ENST00000582792 Q96MT0 163 aa11.13□□□□□ -0.63
SS18-222ENST00000582792 C14orf119Q9NWQ9 140 aa11.13□□□□□ -0.63
SS18-222ENST00000582792 FBLN5Q9UBX5 448 aa11.13□□□□□ -0.63
SS18-222ENST00000582792 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.13□□□□□ -0.63
SS18-222ENST00000582792 TMEM14AQ9Y6G1 99 aa11.13□□□□□ -0.63
SS18-222ENST00000582792 A0A1B0GW55 424 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 RNASEK-C17orf49H0YIS7 233 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 DUX4L2P0CJ85 424 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 DUX4L3P0CJ86 424 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 DUX4L4P0CJ87 422 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 DUX4L5P0CJ88 424 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 DUX4L6P0CJ89 424 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 DUX4L7P0CJ90 424 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 MUC1P15941 1255 aaPredicted RBP11.12□□□□□ -0.63
SS18-222ENST00000582792 EEF1B2P24534 225 aaKnown RBP11.12□□□□□ -0.63
SS18-222ENST00000582792 CAPGP40121 348 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 GUCA2AQ02747 115 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 HERPUD1Q15011 391 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 MICBQ29980 383 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 ZNF691Q5VV52 312 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 SLC35E4Q6ICL7 350 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 DUX4L9Q6RFH8 374 aaPredicted RBP11.12□□□□□ -0.63
SS18-222ENST00000582792 LYPD4Q6UWN0 246 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 DRAM2Q6UX65 266 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 ENTHD1Q8IYW4 607 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 CMTM4Q8IZR5 234 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 OR56B2PQ8NGI1 322 aa11.12□□□□□ -0.63
SS18-222ENST00000582792 OR6N2Q8NGY6 317 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms