RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 OFCC1Q8IZS5 231 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 SFXN5Q8TD22 340 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 ITLN2Q8WWU7 325 aaPredicted RBP1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 RXFP2Q8WXD0 754 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 C8orf44Q96CB5 159 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 SNF8Q96H20 258 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 ZNF75AQ96N20 296 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 DERL3Q96Q80 235 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 PEBP4Q96S96 227 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 GPR21Q99679 349 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 BPIFA3Q9BQP9 254 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 FAM60AQ9NP50 221 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 HEBP1Q9NRV9 189 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 NMRK1Q9NWW6 199 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 LYARQ9NX58 379 aaKnown RBP1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 GCNT4Q9P109 453 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 RRP15Q9Y3B9 282 aaKnown RBP1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 LTBP2Q14767 1821 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 VWDEQ8N2E2 1590 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 BAZ1BQ9UIG0 1483 aaKnown RBP1□□□□□ -2.25
SMCHD1-206ENST00000581631 PHLPP2Q6ZVD8 1323 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 LOXHD1Q8IVV2 1947 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 A0A0G2JMP0 313 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 A0A0X1KG70 313 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 ERI3O43414 337 aaKnown RBP1□□□□□ -2.25
SMCHD1-206ENST00000581631 CTNSO60931 367 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 DNAJB6O75190 326 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 CDH16O75309 829 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 ENTPD6O75354 484 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 ZNF708P17019 499 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 CSRP1P21291 193 aaKnown RBP1□□□□□ -2.25
SMCHD1-206ENST00000581631 CXCR1P25024 350 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 STOMP27105 288 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 AP1S2P56377 157 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 DEFB103AP81534 67 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 ZNF33AQ06730 810 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 INCA1Q0VD86 236 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 LGALSLQ3ZCW2 172 aaPredicted RBP1□□□□□ -2.25
SMCHD1-206ENST00000581631 CARD17Q5XLA6 110 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 OR2T5Q6IEZ7 315 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 WDR82Q6UXN9 313 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 TCF24Q7RTU0 167 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 RNF10Q8N5U6 811 aaKnown RBP1□□□□□ -2.25
SMCHD1-206ENST00000581631 EIF4E3Q8N5X7 224 aaKnown RBP1□□□□□ -2.25
SMCHD1-206ENST00000581631 PQLC3Q8N755 202 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 CCDC148Q8NFR7 591 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 OR2T29Q8NH02 315 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 OR51F2Q8NH61 342 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 ASZ1Q8WWH4 475 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 TGS1Q96RS0 853 aaKnown RBP1□□□□□ -2.25
SMCHD1-206ENST00000581631 FAM192AQ9GZU8 254 aa1□□□□□ -2.25
SMCHD1-206ENST00000581631 GEMIN7Q9H840 131 aaKnown RBP1□□□□□ -2.25
SMCHD1-206ENST00000581631 SPATA31E1Q6ZUB1 1445 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 IGHV6-1A0A0B4J1U7 121 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 A0A1W2PNM2 257 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 GGTLC3B5MD39 225 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 ERCC1P07992 297 aaPredicted RBP0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 SLC35G6P0C7Q6 338 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 SEC11BP0C7V7 166 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 RPS5P46782 204 aaKnown RBP0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 RGS8P57771 180 aaPredicted RBP0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 OR2B8PP59922 312 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 GRB2P62993 217 aaKnown RBP0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 HMGN5P82970 282 aaKnown RBP0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 C2orf54Q08AI8 447 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 CUL2Q13617 745 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 TFDP2Q14188 446 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 MAPRE2Q15555 327 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 PCOTHQ58A44 107 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 MRPL2Q5T653 305 aaKnown RBP0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 STEAP4Q687X5 459 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 RWDD4Q6NW29 188 aaKnown RBP0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 TRMT10CQ7L0Y3 403 aaKnown RBP0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 TMEM144Q7Z5S9 345 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 SCD5Q86SK9 330 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 UNC93AQ86WB7 457 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 JAGN1Q8N5M9 183 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 OR4C5Q8NGB2 326 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 ISG20Q96AZ6 181 aaKnown RBP0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 FXYD5Q96DB9 178 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 FAM19A4Q96LR4 140 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 C20orf166-AS1Q96NR2 134 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 RDH12Q96NR8 316 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 FBXO8Q9NRD0 319 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 TMEM100Q9NV29 134 aa0.99□□□□□ -2.25
SMCHD1-206ENST00000581631 NSD2O96028 1365 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 KBTBD11-OT1A0A1B0GTJ5 212 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 CTAGE15A4D2H0 777 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 BCKDKO14874 412 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 ZBTB5O15062 677 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 SIVA1O15304 175 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 FCN3O75636 299 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 TDP2O95551 362 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 PTHP01270 115 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 IFNW1P05000 195 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 TUBG1P23258 451 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 HMOX2P30519 316 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 TUFMP49411 452 aaKnown RBP0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 C21orf59P57076 290 aa0.98□□□□□ -2.25
SMCHD1-206ENST00000581631 ADIGQ0VDE8 80 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms