RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, human

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT20-210	ENST00000580357	ERICH4	A6NGS2	130 aa		13.74	□□□□□ -0.21
IFT20-210	ENST00000580357		A8MXK9	166 aa		13.74	□□□□□ -0.21
IFT20-210	ENST00000580357		H0YJX3	145 aa		13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	CDIPT	O14735	213 aa		13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	ZNF205	O95201	554 aa		13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	ISG15	P05161	165 aa		13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	RPS2	P15880	293 aa	Known RBP	13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	DCK	P27707	260 aa		13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	OR12D2	P58182	307 aa		13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	GNB2	P62879	340 aa		13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	LCN2	P80188	198 aa		13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	C11orf91	Q3C1V1	193 aa		13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	TEX36	Q5VZQ5	186 aa		13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	TMEM42	Q69YG0	159 aa		13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	ZNF826P	Q6ZT77	177 aa		13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	LHFPL3	Q86UP9	236 aa		13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	C8orf59	Q8N0T1	100 aa	Predicted RBP	13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	GCSAM	Q8N6F7	178 aa		13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	BOLL	Q8N9W6	283 aa	Known RBP	13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	DEFB108B	Q8NET1	73 aa		13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	OR2G2	Q8NGZ5	317 aa		13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	APH1B	Q8WW43	257 aa		13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	C12orf43	Q96C57	262 aa	Known RBP	13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	SSBP3	Q9BWW4	388 aa	Predicted RBP	13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	JAM3	Q9BX67	310 aa		13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	ACOXL	Q9NUZ1	547 aa		13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	ERVK13-1	Q9NX77	482 aa		13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	ERVK-18	Q9QC07	812 aa		13.74	□□□□□ -0.21
IFT20-210	ENST00000580357	ZNF732	B4DXR9	585 aa		13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	WBP4	O75554	376 aa	Known RBP	13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	FAH	P16930	419 aa		13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	SRP14	P37108	136 aa	Known RBP	13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	PSMB10	P40306	273 aa		13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	GPM6A	P51674	278 aa		13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	GBX2	P52951	348 aa	Predicted RBP	13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	WDR38	Q5JTN6	314 aa		13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	FAM201A	Q5SY85	155 aa		13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	CD276	Q5ZPR3	534 aa		13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	PLCXD3	Q63HM9	321 aa		13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	WDR82	Q6UXN9	313 aa		13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	WDR86	Q86TI4	376 aa		13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	ZNF573	Q86YE8	665 aa		13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	SCCPDH	Q8NBX0	429 aa		13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	OR52I1	Q8NGK6	324 aa		13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	LRRC29	Q8WV35	223 aa		13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	C4orf36	Q96KX1	117 aa		13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	ALG8	Q9BVK2	526 aa		13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	VCX3B	Q9H321	246 aa		13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	OR51I2	Q9H344	312 aa		13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	PPP1R3E	Q9H7J1	279 aa		13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	PLEKHA1	Q9HB21	404 aa		13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	CHCHD3	Q9NX63	227 aa	Known RBP	13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	OR5V1	Q9UGF6	321 aa		13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	SLC7A11	Q9UPY5	501 aa		13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	MYRF	Q9Y2G1	1151 aa		13.73	□□□□□ -0.21
IFT20-210	ENST00000580357	SRRM5	B3KS81	715 aa		13.72	□□□□□ -0.21
IFT20-210	ENST00000580357	C3orf80	F5H4A9	247 aa		13.72	□□□□□ -0.21
IFT20-210	ENST00000580357		H0YHG0	523 aa		13.72	□□□□□ -0.21
IFT20-210	ENST00000580357	TNFRSF13B	O14836	293 aa	Predicted RBP	13.72	□□□□□ -0.21
IFT20-210	ENST00000580357	ZFP36	P26651	326 aa	Known RBP	13.72	□□□□□ -0.21
IFT20-210	ENST00000580357	PITPNB	P48739	271 aa		13.72	□□□□□ -0.21
IFT20-210	ENST00000580357	CSNK2B	P67870	215 aa		13.72	□□□□□ -0.21
IFT20-210	ENST00000580357	ALKBH1	Q13686	389 aa	Known RBP	13.72	□□□□□ -0.21
IFT20-210	ENST00000580357	CEP78	Q5JTW2	689 aa		13.72	□□□□□ -0.21
IFT20-210	ENST00000580357	SFRP4	Q6FHJ7	346 aa	Predicted RBP	13.72	□□□□□ -0.21
IFT20-210	ENST00000580357	TMPRSS11A	Q6ZMR5	421 aa		13.72	□□□□□ -0.21
IFT20-210	ENST00000580357	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.72	□□□□□ -0.21
IFT20-210	ENST00000580357	PRSS35	Q8N3Z0	413 aa		13.72	□□□□□ -0.21
IFT20-210	ENST00000580357	HPSE2	Q8WWQ2	592 aa		13.72	□□□□□ -0.21
IFT20-210	ENST00000580357	PP6455	Q8WZ26	134 aa		13.72	□□□□□ -0.21
IFT20-210	ENST00000580357	PELI1	Q96FA3	418 aa		13.72	□□□□□ -0.21
IFT20-210	ENST00000580357	RASL12	Q9NYN1	266 aa		13.72	□□□□□ -0.21
IFT20-210	ENST00000580357	FRRS1L	Q9P0K9	344 aa		13.72	□□□□□ -0.21
IFT20-210	ENST00000580357	KAAG1	Q9UBP8	84 aa		13.72	□□□□□ -0.21
IFT20-210	ENST00000580357	CLN8	Q9UBY8	286 aa		13.72	□□□□□ -0.21
IFT20-210	ENST00000580357	NKX1-2	Q9UD57	310 aa	Predicted RBP	13.72	□□□□□ -0.21
IFT20-210	ENST00000580357	GATB	O75879	557 aa	Known RBP	13.71	□□□□□ -0.21
IFT20-210	ENST00000580357	CLIC3	O95833	236 aa		13.71	□□□□□ -0.21
IFT20-210	ENST00000580357	RBMX	P38159	391 aa	Known RBP	13.71	□□□□□ -0.21
IFT20-210	ENST00000580357	HNRNPA0	Q13151	305 aa	Known RBP	13.71	□□□□□ -0.21
IFT20-210	ENST00000580357	ODF4	Q2M2E3	257 aa		13.71	□□□□□ -0.21
IFT20-210	ENST00000580357	BTNL3	Q6UXE8	466 aa		13.71	□□□□□ -0.21
IFT20-210	ENST00000580357	CNIH3	Q8TBE1	160 aa		13.71	□□□□□ -0.21
IFT20-210	ENST00000580357	RAB40A	Q8WXH6	277 aa		13.71	□□□□□ -0.21
IFT20-210	ENST00000580357	TFAP2C	Q92754	450 aa		13.71	□□□□□ -0.21
IFT20-210	ENST00000580357	RPL3L	Q92901	407 aa	Known RBP	13.71	□□□□□ -0.21
IFT20-210	ENST00000580357	DNTTIP1	Q9H147	329 aa		13.71	□□□□□ -0.21
IFT20-210	ENST00000580357	C7orf69	Q9H7B7	122 aa		13.71	□□□□□ -0.21
IFT20-210	ENST00000580357	METTL17	Q9H7H0	456 aa	Predicted RBP	13.71	□□□□□ -0.21
IFT20-210	ENST00000580357	DNAJB11	Q9UBS4	358 aa		13.71	□□□□□ -0.21
IFT20-210	ENST00000580357	METRN	Q9UJH8	293 aa		13.71	□□□□□ -0.21
IFT20-210	ENST00000580357	CAB39	Q9Y376	341 aa	Predicted RBP	13.71	□□□□□ -0.21
IFT20-210	ENST00000580357	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.71	□□□□□ -0.21
IFT20-210	ENST00000580357	EFCAB10	A6NFE3	127 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	ANKRD61	A6NGH8	418 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	ADAM20	O43506	726 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	LIPF	P07098	398 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	ACAA1	P09110	424 aa	Predicted RBP	13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	CCDC159	P0C7I6	412 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	MYL12A	P19105	171 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms