RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 RORBQ92753 470 aa16.21■□□□□ 0.19
LIMD2-209ENST00000580222 REEP6Q96HR9 211 aa16.21■□□□□ 0.19
LIMD2-209ENST00000580222 MND1Q9BWT6 205 aa16.21■□□□□ 0.19
LIMD2-209ENST00000580222 OPA3Q9H6K4 179 aa16.21■□□□□ 0.19
LIMD2-209ENST00000580222 AUP1Q9Y679 476 aa16.21■□□□□ 0.19
LIMD2-209ENST00000580222 PPIAL4EA0A075B759 164 aa16.2■□□□□ 0.18
LIMD2-209ENST00000580222 PPIAL4CA0A0B4J2A2 164 aa16.2■□□□□ 0.18
LIMD2-209ENST00000580222 PPIAL4DF5H284 164 aa16.2■□□□□ 0.18
LIMD2-209ENST00000580222 PPIAL4FP0DN26 164 aa16.2■□□□□ 0.18
LIMD2-209ENST00000580222 IGHV4-38-2P0DP08 117 aa16.2■□□□□ 0.18
LIMD2-209ENST00000580222 ZNF250P15622 560 aa16.2■□□□□ 0.18
LIMD2-209ENST00000580222 WNT4P56705 351 aa16.2■□□□□ 0.18
LIMD2-209ENST00000580222 PRSS12P56730 875 aa16.2■□□□□ 0.18
LIMD2-209ENST00000580222 ZNF92Q03936 586 aa16.2■□□□□ 0.18
LIMD2-209ENST00000580222 HLXQ14774 488 aaPredicted RBP16.2■□□□□ 0.18
LIMD2-209ENST00000580222 PCGF3Q3KNV8 242 aa16.2■□□□□ 0.18
LIMD2-209ENST00000580222 SPRNQ5BIV9 151 aa16.2■□□□□ 0.18
LIMD2-209ENST00000580222 TMEM255AQ5JRV8 349 aa16.2■□□□□ 0.18
LIMD2-209ENST00000580222 FBXW12Q6X9E4 464 aa16.2■□□□□ 0.18
LIMD2-209ENST00000580222 PGAP1Q75T13 922 aa16.2■□□□□ 0.18
LIMD2-209ENST00000580222 CATSPERDQ86XM0 798 aa16.2■□□□□ 0.18
LIMD2-209ENST00000580222 KLBQ86Z14 1044 aa16.2■□□□□ 0.18
LIMD2-209ENST00000580222 HAVCR2Q8TDQ0 301 aa16.2■□□□□ 0.18
LIMD2-209ENST00000580222 CCL17Q92583 94 aa16.2■□□□□ 0.18
LIMD2-209ENST00000580222 RAB1CQ92928 201 aa16.2■□□□□ 0.18
LIMD2-209ENST00000580222 CMBLQ96DG6 245 aa16.2■□□□□ 0.18
LIMD2-209ENST00000580222 CDCA4Q9BXL8 241 aa16.2■□□□□ 0.18
LIMD2-209ENST00000580222 DCAF16Q9NXF7 216 aa16.2■□□□□ 0.18
LIMD2-209ENST00000580222 ZNF319Q9P2F9 582 aa16.2■□□□□ 0.18
LIMD2-209ENST00000580222 TIMM8AO60220 97 aaPredicted RBP16.19■□□□□ 0.18
LIMD2-209ENST00000580222 RAC2P15153 192 aa16.19■□□□□ 0.18
LIMD2-209ENST00000580222 CFL1P23528 166 aaKnown RBP16.19■□□□□ 0.18
LIMD2-209ENST00000580222 SEC61A1P61619 476 aaKnown RBP16.19■□□□□ 0.18
LIMD2-209ENST00000580222 GK2Q14410 553 aaPredicted RBP16.19■□□□□ 0.18
LIMD2-209ENST00000580222 HFEQ30201 348 aa16.19■□□□□ 0.18
LIMD2-209ENST00000580222 WDR38Q5JTN6 314 aa16.19■□□□□ 0.18
LIMD2-209ENST00000580222 RNLSQ5VYX0 342 aa16.19■□□□□ 0.18
LIMD2-209ENST00000580222 NANOGP1Q8N7R0 232 aa16.19■□□□□ 0.18
LIMD2-209ENST00000580222 GATAD2BQ8WXI9 593 aa16.19■□□□□ 0.18
LIMD2-209ENST00000580222 RGCCQ9H4X1 137 aa16.19■□□□□ 0.18
LIMD2-209ENST00000580222 TRIM36Q9NQ86 728 aa16.19■□□□□ 0.18
LIMD2-209ENST00000580222 SLC22A13Q9Y226 551 aa16.19■□□□□ 0.18
LIMD2-209ENST00000580222 FAM181BA6NEQ2 426 aa16.18■□□□□ 0.18
LIMD2-209ENST00000580222 M0QZ24 198 aa16.18■□□□□ 0.18
LIMD2-209ENST00000580222 TNFAIP8O95379 198 aa16.18■□□□□ 0.18
LIMD2-209ENST00000580222 TTRP02766 147 aa16.18■□□□□ 0.18
LIMD2-209ENST00000580222 SELEP16581 610 aa16.18■□□□□ 0.18
LIMD2-209ENST00000580222 ZNF12P17014 697 aa16.18■□□□□ 0.18
LIMD2-209ENST00000580222 KIR3DL2P43630 455 aa16.18■□□□□ 0.18
LIMD2-209ENST00000580222 ALKBH1Q13686 389 aaKnown RBP16.18■□□□□ 0.18
LIMD2-209ENST00000580222 IRF3Q14653 427 aa16.18■□□□□ 0.18
LIMD2-209ENST00000580222 ODF4Q2M2E3 257 aa16.18■□□□□ 0.18
LIMD2-209ENST00000580222 KCTD21Q4G0X4 260 aa16.18■□□□□ 0.18
LIMD2-209ENST00000580222 BRICD5Q6PL45 260 aa16.18■□□□□ 0.18
LIMD2-209ENST00000580222 C17orf107Q6ZR85 190 aa16.18■□□□□ 0.18
LIMD2-209ENST00000580222 ELMOD2Q8IZ81 293 aa16.18■□□□□ 0.18
LIMD2-209ENST00000580222 PRSS35Q8N3Z0 413 aa16.18■□□□□ 0.18
LIMD2-209ENST00000580222 OR2G2Q8NGZ5 317 aa16.18■□□□□ 0.18
LIMD2-209ENST00000580222 PPP1R14AQ96A00 147 aa16.18■□□□□ 0.18
LIMD2-209ENST00000580222 SGK3Q96BR1 496 aa16.18■□□□□ 0.18
LIMD2-209ENST00000580222 TIMD4Q96H15 378 aa16.18■□□□□ 0.18
LIMD2-209ENST00000580222 DECR2Q9NUI1 292 aa16.18■□□□□ 0.18
LIMD2-209ENST00000580222 ZNF391Q9UJN7 358 aa16.18■□□□□ 0.18
LIMD2-209ENST00000580222 INSIG2Q9Y5U4 225 aa16.18■□□□□ 0.18
LIMD2-209ENST00000580222 A0A0U1RQV5 110 aa16.17■□□□□ 0.18
LIMD2-209ENST00000580222 ISPDA4D126 451 aa16.17■□□□□ 0.18
LIMD2-209ENST00000580222 GGT3PA6NGU5 568 aa16.17■□□□□ 0.18
LIMD2-209ENST00000580222 E9PI62 339 aa16.17■□□□□ 0.18
LIMD2-209ENST00000580222 TPD52L2O43399 206 aaKnown RBP16.17■□□□□ 0.18
LIMD2-209ENST00000580222 MRPS14O60783 128 aaKnown RBP16.17■□□□□ 0.18
LIMD2-209ENST00000580222 TSPAN15O95858 294 aa16.17■□□□□ 0.18
LIMD2-209ENST00000580222 IGHV3-13P01766 116 aa16.17■□□□□ 0.18
LIMD2-209ENST00000580222 KITLGP21583 273 aa16.17■□□□□ 0.18
LIMD2-209ENST00000580222 TGM4P49221 684 aa16.17■□□□□ 0.18
LIMD2-209ENST00000580222 TAS2R43P59537 309 aa16.17■□□□□ 0.18
LIMD2-209ENST00000580222 NANOS3P60323 173 aaKnown RBP16.17■□□□□ 0.18
LIMD2-209ENST00000580222 PSG7Q13046 419 aa16.17■□□□□ 0.18
LIMD2-209ENST00000580222 MED22Q15528 200 aa16.17■□□□□ 0.18
LIMD2-209ENST00000580222 MOGQ16653 247 aa16.17■□□□□ 0.18
LIMD2-209ENST00000580222 OR2T2Q6IF00 324 aa16.17■□□□□ 0.18
LIMD2-209ENST00000580222 FDX2Q6P4F2 183 aa16.17■□□□□ 0.18
LIMD2-209ENST00000580222 OR5AS1Q8N127 324 aa16.17■□□□□ 0.18
LIMD2-209ENST00000580222 SVOPQ8N4V2 548 aa16.17■□□□□ 0.18
LIMD2-209ENST00000580222 OR51E1Q8TCB6 317 aa16.17■□□□□ 0.18
LIMD2-209ENST00000580222 SPSB4Q96A44 273 aa16.17■□□□□ 0.18
LIMD2-209ENST00000580222 HAVCR1Q96D42 359 aa16.17■□□□□ 0.18
LIMD2-209ENST00000580222 MS4A7Q9GZW8 240 aaPredicted RBP16.17■□□□□ 0.18
LIMD2-209ENST00000580222 SAP30LQ9HAJ7 183 aa16.17■□□□□ 0.18
LIMD2-209ENST00000580222 GPR84Q9NQS5 396 aa16.17■□□□□ 0.18
LIMD2-209ENST00000580222 BABAM2Q9NXR7 383 aa16.17■□□□□ 0.18
LIMD2-209ENST00000580222 GPR160Q9UJ42 338 aa16.17■□□□□ 0.18
LIMD2-209ENST00000580222 hCG_38984A0A1B0GV85 526 aa16.16■□□□□ 0.18
LIMD2-209ENST00000580222 P2RY10O00398 339 aa16.16■□□□□ 0.18
LIMD2-209ENST00000580222 HOXA3O43365 443 aaPredicted RBP16.16■□□□□ 0.18
LIMD2-209ENST00000580222 FOXH1O75593 365 aa16.16■□□□□ 0.18
LIMD2-209ENST00000580222 PRB2P02812 416 aaPredicted RBP16.16■□□□□ 0.18
LIMD2-209ENST00000580222 UBCP0CG48 685 aaKnown RBP16.16■□□□□ 0.18
LIMD2-209ENST00000580222 MAP2K4P45985 399 aa16.16■□□□□ 0.18
LIMD2-209ENST00000580222 GTF2A1P52655 376 aaPredicted RBP16.16■□□□□ 0.18
LIMD2-209ENST00000580222 CDK5R1Q15078 307 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms