RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	TESC	Q96BS2	214 aa		4.65	□□□□□ -1.67
KPNB1-209	ENST00000580158	SEH1L	Q96EE3	360 aa		4.65	□□□□□ -1.67
KPNB1-209	ENST00000580158	NOL4L	Q96MY1	436 aa	Predicted RBP	4.65	□□□□□ -1.67
KPNB1-209	ENST00000580158	GAFA1	Q96PS6	74 aa		4.65	□□□□□ -1.67
KPNB1-209	ENST00000580158	FAM110A	Q9BQ89	295 aa		4.65	□□□□□ -1.67
KPNB1-209	ENST00000580158	TMEM120A	Q9BXJ8	343 aa		4.65	□□□□□ -1.67
KPNB1-209	ENST00000580158	GON7	Q9BXV9	100 aa		4.65	□□□□□ -1.67
KPNB1-209	ENST00000580158	RAB17	Q9H0T7	212 aa		4.65	□□□□□ -1.67
KPNB1-209	ENST00000580158	HIPK2	Q9H2X6	1198 aa		4.65	□□□□□ -1.67
KPNB1-209	ENST00000580158	EVA1A	Q9H8M9	152 aa		4.65	□□□□□ -1.67
KPNB1-209	ENST00000580158	ELL3	Q9HB65	397 aa	Predicted RBP	4.65	□□□□□ -1.67
KPNB1-209	ENST00000580158	BCL2L10	Q9HD36	194 aa		4.65	□□□□□ -1.67
KPNB1-209	ENST00000580158	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.65	□□□□□ -1.67
KPNB1-209	ENST00000580158	SNTG1	Q9NSN8	517 aa		4.65	□□□□□ -1.67
KPNB1-209	ENST00000580158	PNPO	Q9NVS9	261 aa		4.65	□□□□□ -1.67
KPNB1-209	ENST00000580158	CHCHD3	Q9NX63	227 aa	Known RBP	4.65	□□□□□ -1.67
KPNB1-209	ENST00000580158	A4GNT	Q9UNA3	340 aa		4.65	□□□□□ -1.67
KPNB1-209	ENST00000580158	PPP2R2C	Q9Y2T4	447 aa		4.65	□□□□□ -1.67
KPNB1-209	ENST00000580158	MINOS1-NBL1	R4GNA1	71 aa		4.65	□□□□□ -1.67
KPNB1-209	ENST00000580158		A0A1B0GVY2	172 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	NPIPB13	A6NJU9	1138 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	ODF3B	A8MYP8	253 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	C12orf77	C9JDV5	145 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	NPIPB4	C9JG80	1138 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158		E9PBE3	544 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	ANP32D	O95626	131 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	LCAT	P04180	440 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	IGHV1-8	P0DP01	117 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	CPA3	P15088	417 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	FUT1	P19526	365 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	CD24	P25063	80 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	AQP2	P41181	271 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	RPL27	P61353	136 aa	Known RBP	4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	TOP3A	Q13472	1001 aa	Predicted RBP	4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	SNAPC1	Q16533	368 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	PNLIPRP3	Q17RR3	467 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	CCDC92	Q53HC0	331 aa	Predicted RBP	4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	TMEM200B	Q69YZ2	307 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	C8orf74	Q6P047	294 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	ACSM6	Q6P461	480 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	TEPP	Q6URK8	271 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	WDR82	Q6UXN9	313 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	KRT73	Q86Y46	540 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	ZNRF1	Q8ND25	227 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	GJC3	Q8NFK1	279 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	OR11H6	Q8NGC7	330 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	AGR3	Q8TD06	166 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	C4orf3	Q8WVX3	66 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	TSEN15	Q8WW01	171 aa	Known RBP	4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	OR52E6	Q96RD3	313 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	MCHR1	Q99705	422 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	COQ7	Q99807	217 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	TMED9	Q9BVK6	235 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	FUT8	Q9BYC5	575 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	HDHD2	Q9H0R4	259 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	RETN	Q9HD89	108 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	ASIC5	Q9NY37	505 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	NINJ2	Q9NZG7	142 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	POLR1D	Q9Y2S0	133 aa		4.64	□□□□□ -1.67
KPNB1-209	ENST00000580158	PRORSD1P	A6NEY8	169 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158		A6NIZ1	184 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	ANKRD30BL	A7E2S9	258 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158		F5H5K5	113 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	RFXANK	O14593	260 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	CDIPT	O14735	213 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	RER1	O15258	196 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	HSPA12A	O43301	675 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	PTP4A3	O75365	173 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	BRI3	O95415	125 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	AMY1A	P04745	511 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	CTLA4	P16410	223 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	CCL3L1	P16619	93 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	CDKN2C	P42773	168 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	MVD	P53602	400 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	RAP1B	P61224	184 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	LSM6	P62312	80 aa	Known RBP	4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	RAP1A	P62834	184 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	FHL2	Q14192	279 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	ALG10	Q5BKT4	473 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	NANOGP8	Q6NSW7	305 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	TMEM65	Q6PI78	240 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	DHRS4L2	Q6PKH6	230 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	ACP7	Q6ZNF0	438 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	TMPRSS11F	Q6ZWK6	438 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	TSEN54	Q7Z6J9	526 aa	Known RBP	4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	SLC35E3	Q7Z769	313 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	PATL1	Q86TB9	770 aa	Known RBP	4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	GLB1L2	Q8IW92	636 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	C11orf53	Q8IXP5	236 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	STPG2	Q8N412	459 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	LNX2	Q8N448	690 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	OR1M1	Q8NGA1	313 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	OR1N2	Q8NGR9	330 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	OR2T27	Q8NH04	317 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	ANGPTL6	Q8NI99	470 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	MUL1	Q969V5	352 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	RAB3IP	Q96QF0	476 aa	Predicted RBP	4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	OR4C12	Q96R67	309 aa		4.63	□□□□□ -1.67
KPNB1-209	ENST00000580158	RAD21L1	Q9H4I0	556 aa		4.63	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms