RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 CAV3P56539 151 aa11.3□□□□□ -0.6
GGA3-208ENST00000579743 CDK5Q00535 292 aa11.3□□□□□ -0.6
GGA3-208ENST00000579743 RIPPLY1Q0D2K3 151 aa11.3□□□□□ -0.6
GGA3-208ENST00000579743 FLOT2Q14254 428 aa11.3□□□□□ -0.6
GGA3-208ENST00000579743 SNAPC1Q16533 368 aa11.3□□□□□ -0.6
GGA3-208ENST00000579743 OCLNQ16625 522 aa11.3□□□□□ -0.6
GGA3-208ENST00000579743 ZNF829Q3KNS6 432 aaPredicted RBP11.3□□□□□ -0.6
GGA3-208ENST00000579743 DNAL1Q4LDG9 190 aa11.3□□□□□ -0.6
GGA3-208ENST00000579743 FAM76BQ5HYJ3 339 aa11.3□□□□□ -0.6
GGA3-208ENST00000579743 STUMQ69YW2 141 aa11.3□□□□□ -0.6
GGA3-208ENST00000579743 DHRS7BQ6IAN0 325 aaPredicted RBP11.3□□□□□ -0.6
GGA3-208ENST00000579743 ADGRG5Q8IZF4 528 aa11.3□□□□□ -0.6
GGA3-208ENST00000579743 DTX3Q8N9I9 347 aa11.3□□□□□ -0.6
GGA3-208ENST00000579743 OR5R1Q8NH85 324 aa11.3□□□□□ -0.6
GGA3-208ENST00000579743 C8orf46Q8TAG6 207 aa11.3□□□□□ -0.6
GGA3-208ENST00000579743 CANT1Q8WVQ1 401 aa11.3□□□□□ -0.6
GGA3-208ENST00000579743 UBE2FQ969M7 185 aa11.3□□□□□ -0.6
GGA3-208ENST00000579743 AMELYQ99218 206 aa11.3□□□□□ -0.6
GGA3-208ENST00000579743 FAM234AQ9H0X4 552 aa11.3□□□□□ -0.6
GGA3-208ENST00000579743 METTL8Q9H825 291 aaKnown RBP11.3□□□□□ -0.6
GGA3-208ENST00000579743 SIRT7Q9NRC8 400 aa11.3□□□□□ -0.6
GGA3-208ENST00000579743 SNTG1Q9NSN8 517 aa11.3□□□□□ -0.6
GGA3-208ENST00000579743 NLKQ9UBE8 527 aa11.3□□□□□ -0.6
GGA3-208ENST00000579743 DNAJB9Q9UBS3 223 aa11.3□□□□□ -0.6
GGA3-208ENST00000579743 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.3□□□□□ -0.6
GGA3-208ENST00000579743 LRP12Q9Y561 859 aa11.3□□□□□ -0.6
GGA3-208ENST00000579743 TMEM269A0A1B0GVZ9 245 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 hCG_1809904A0A1W2PP81 198 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 A0A1W2PPE2 198 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 A0A1W2PR64 198 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 A0A1W2PRV1 198 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 OR5B21A6NL26 309 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 OR2AT4A6NND4 320 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 M0R1W7 72 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 NPFFO15130 113 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 AKR7A2O43488 359 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 IGHV4-59P01825 116 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 ALOX5APP20292 161 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 DCTDP32321 178 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 TGFBR2P37173 567 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 GPM6AP51674 278 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 RIDAP52758 137 aaKnown RBP11.29□□□□□ -0.6
GGA3-208ENST00000579743 CAPZA1P52907 286 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 ACSM1Q08AH1 577 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 APOFQ13790 326 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 CEACAM21Q3KPI0 293 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 ZBTB37Q5TC79 503 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 ZNF788Q6ZQV5 615 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 OR8B12Q8NGG6 310 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 OR5A2Q8NGI9 324 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 OR5D13Q8NGL4 314 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 TAF15Q92804 592 aaKnown RBP eCLIP11.29□□□□□ -0.6
GGA3-208ENST00000579743 RASL12Q9NYN1 266 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 TVP23BQ9NYZ1 205 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.29□□□□□ -0.6
GGA3-208ENST00000579743 ZNF319Q9P2F9 582 aa11.29□□□□□ -0.6
GGA3-208ENST00000579743 SF3B6Q9Y3B4 125 aaKnown RBP11.29□□□□□ -0.6
GGA3-208ENST00000579743 TRBV23-1A0A0A0MS06 115 aa11.28□□□□□ -0.6
GGA3-208ENST00000579743 ANKRD61A6NGH8 418 aa11.28□□□□□ -0.6
GGA3-208ENST00000579743 ZNF732B4DXR9 585 aa11.28□□□□□ -0.6
GGA3-208ENST00000579743 H0YAE9 185 aa11.28□□□□□ -0.6
GGA3-208ENST00000579743 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.28□□□□□ -0.6
GGA3-208ENST00000579743 SIGLEC5O15389 551 aa11.28□□□□□ -0.6
GGA3-208ENST00000579743 ACAA1P09110 424 aaPredicted RBP11.28□□□□□ -0.6
GGA3-208ENST00000579743 ACKR3P25106 362 aa11.28□□□□□ -0.6
GGA3-208ENST00000579743 UBE2E1P51965 193 aa11.28□□□□□ -0.6
GGA3-208ENST00000579743 SMIM21Q3B7S5 101 aa11.28□□□□□ -0.6
GGA3-208ENST00000579743 ZNF684Q5T5D7 378 aa11.28□□□□□ -0.6
GGA3-208ENST00000579743 ZNF679Q8IYX0 411 aa11.28□□□□□ -0.6
GGA3-208ENST00000579743 TMEM185AQ8NFB2 350 aa11.28□□□□□ -0.6
GGA3-208ENST00000579743 NRBF2Q96F24 287 aa11.28□□□□□ -0.6
GGA3-208ENST00000579743 CLPTM1LQ96KA5 538 aa11.28□□□□□ -0.6
GGA3-208ENST00000579743 MNTQ99583 582 aa11.28□□□□□ -0.6
GGA3-208ENST00000579743 TEAD3Q99594 435 aa11.28□□□□□ -0.6
GGA3-208ENST00000579743 CITED1Q99966 193 aa11.28□□□□□ -0.6
GGA3-208ENST00000579743 WDR13Q9H1Z4 485 aa11.28□□□□□ -0.6
GGA3-208ENST00000579743 SLC25A19Q9HC21 320 aa11.28□□□□□ -0.6
GGA3-208ENST00000579743 TCF7L1Q9HCS4 588 aa11.28□□□□□ -0.6
GGA3-208ENST00000579743 PAPOLBQ9NRJ5 636 aaKnown RBP11.28□□□□□ -0.6
GGA3-208ENST00000579743 ENPP5Q9UJA9 477 aa11.28□□□□□ -0.6
GGA3-208ENST00000579743 VPREB3Q9UKI3 123 aa11.28□□□□□ -0.6
GGA3-208ENST00000579743 IKZF2Q9UKS7 526 aa11.28□□□□□ -0.6
GGA3-208ENST00000579743 MEIOCA2RUB1 952 aa11.27□□□□□ -0.61
GGA3-208ENST00000579743 SLC1A7O00341 560 aa11.27□□□□□ -0.61
GGA3-208ENST00000579743 T-ENOLP0DO92 83 aa11.27□□□□□ -0.61
GGA3-208ENST00000579743 PRKACGP22612 351 aa11.27□□□□□ -0.61
GGA3-208ENST00000579743 CRISP1P54107 249 aa11.27□□□□□ -0.61
GGA3-208ENST00000579743 RELBQ01201 579 aa11.27□□□□□ -0.61
GGA3-208ENST00000579743 DEFA6Q01524 100 aa11.27□□□□□ -0.61
GGA3-208ENST00000579743 TAF9Q16594 264 aa11.27□□□□□ -0.61
GGA3-208ENST00000579743 PLCXD3Q63HM9 321 aa11.27□□□□□ -0.61
GGA3-208ENST00000579743 MOB3CQ70IA8 216 aa11.27□□□□□ -0.61
GGA3-208ENST00000579743 ZNF573Q86YE8 665 aa11.27□□□□□ -0.61
GGA3-208ENST00000579743 PIP4P2Q8N4L2 257 aa11.27□□□□□ -0.61
GGA3-208ENST00000579743 LINC01006Q8NI28 216 aa11.27□□□□□ -0.61
GGA3-208ENST00000579743 ANGPTL6Q8NI99 470 aa11.27□□□□□ -0.61
GGA3-208ENST00000579743 SEH1LQ96EE3 360 aa11.27□□□□□ -0.61
GGA3-208ENST00000579743 DUS3LQ96G46 650 aaKnown RBP11.27□□□□□ -0.61
GGA3-208ENST00000579743 LYZL4Q96KX0 146 aa11.27□□□□□ -0.61
GGA3-208ENST00000579743 GAFA1Q96PS6 74 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms