RNA–Protein interactions for RNA: ENST00000579558.5

SHMT1-206, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2

Gene SHMT1, Length 1,077 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-206ENST00000579558 CD276Q5ZPR3 534 aa19.86■□□□□ 0.77
SHMT1-206ENST00000579558 PLCXD3Q63HM9 321 aa19.86■□□□□ 0.77
SHMT1-206ENST00000579558 MOB3CQ70IA8 216 aa19.86■□□□□ 0.77
SHMT1-206ENST00000579558 SEH1LQ96EE3 360 aa19.86■□□□□ 0.77
SHMT1-206ENST00000579558 MBOAT4Q96T53 435 aa19.86■□□□□ 0.77
SHMT1-206ENST00000579558 RASSF4Q9H2L5 321 aa19.86■□□□□ 0.77
SHMT1-206ENST00000579558 ZNF732B4DXR9 585 aa19.85■□□□□ 0.77
SHMT1-206ENST00000579558 E9PQ18 207 aa19.85■□□□□ 0.77
SHMT1-206ENST00000579558 P2RY10O00398 339 aa19.85■□□□□ 0.77
SHMT1-206ENST00000579558 TMPRSS2O15393 492 aa19.85■□□□□ 0.77
SHMT1-206ENST00000579558 PPIAL4GP0DN37 164 aa19.85■□□□□ 0.77
SHMT1-206ENST00000579558 MTNR1AP48039 350 aa19.85■□□□□ 0.77
SHMT1-206ENST00000579558 SNRPGP62308 76 aaKnown RBP19.85■□□□□ 0.77
SHMT1-206ENST00000579558 DMRTC1Q5HYR2 192 aa19.85■□□□□ 0.77
SHMT1-206ENST00000579558 WDR38Q5JTN6 314 aa19.85■□□□□ 0.77
SHMT1-206ENST00000579558 JMJD8Q96S16 334 aa19.85■□□□□ 0.77
SHMT1-206ENST00000579558 KAAG1Q9UBP8 84 aa19.85■□□□□ 0.77
SHMT1-206ENST00000579558 DNAJB11Q9UBS4 358 aa19.85■□□□□ 0.77
SHMT1-206ENST00000579558 ZNF69Q9UC07 566 aa19.85■□□□□ 0.77
SHMT1-206ENST00000579558 SLC22A13Q9Y226 551 aa19.85■□□□□ 0.77
SHMT1-206ENST00000579558 GMPPBQ9Y5P6 360 aa19.85■□□□□ 0.77
SHMT1-206ENST00000579558 OR5B21A6NL26 309 aa19.84■□□□□ 0.77
SHMT1-206ENST00000579558 DVL1O14640 695 aa19.84■□□□□ 0.77
SHMT1-206ENST00000579558 SULT1C4O75897 302 aa19.84■□□□□ 0.77
SHMT1-206ENST00000579558 NRASP01111 189 aa19.84■□□□□ 0.77
SHMT1-206ENST00000579558 ELF3P78545 371 aaPredicted RBP19.84■□□□□ 0.77
SHMT1-206ENST00000579558 OCLNQ16625 522 aa19.84■□□□□ 0.77
SHMT1-206ENST00000579558 SLC25A30Q5SVS4 291 aa19.84■□□□□ 0.77
SHMT1-206ENST00000579558 ZNF684Q5T5D7 378 aa19.84■□□□□ 0.77
SHMT1-206ENST00000579558 MEDAGQ5VYS4 303 aa19.84■□□□□ 0.77
SHMT1-206ENST00000579558 ZBTB49Q6ZSB9 765 aa19.84■□□□□ 0.77
SHMT1-206ENST00000579558 OR5A2Q8NGI9 324 aa19.84■□□□□ 0.77
SHMT1-206ENST00000579558 UPRTQ96BW1 309 aa19.84■□□□□ 0.77
SHMT1-206ENST00000579558 C12orf43Q96C57 262 aaKnown RBP19.84■□□□□ 0.77
SHMT1-206ENST00000579558 CCL13Q99616 98 aa19.84■□□□□ 0.77
SHMT1-206ENST00000579558 SLC29A1Q99808 456 aa19.84■□□□□ 0.77
SHMT1-206ENST00000579558 V9GYS6 101 aa19.84■□□□□ 0.77
SHMT1-206ENST00000579558 A0A1B0GTI1 187 aa19.83■□□□□ 0.77
SHMT1-206ENST00000579558 AKR7A2O43488 359 aa19.83■□□□□ 0.77
SHMT1-206ENST00000579558 BAG2O95816 211 aa19.83■□□□□ 0.77
SHMT1-206ENST00000579558 FGF12P61328 243 aa19.83■□□□□ 0.77
SHMT1-206ENST00000579558 ZNF85Q03923 595 aa19.83■□□□□ 0.77
SHMT1-206ENST00000579558 ODF4Q2M2E3 257 aa19.83■□□□□ 0.77
SHMT1-206ENST00000579558 DOK3Q7L591 496 aa19.83■□□□□ 0.77
SHMT1-206ENST00000579558 SLC36A1Q7Z2H8 476 aa19.83■□□□□ 0.77
SHMT1-206ENST00000579558 FAM220AQ7Z4H9 259 aa19.83■□□□□ 0.77
SHMT1-206ENST00000579558 CATSPERDQ86XM0 798 aa19.83■□□□□ 0.77
SHMT1-206ENST00000579558 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.83■□□□□ 0.77
SHMT1-206ENST00000579558 ZFAND2BQ8WV99 257 aa19.83■□□□□ 0.77
SHMT1-206ENST00000579558 ST8SIA4Q92187 359 aa19.83■□□□□ 0.77
SHMT1-206ENST00000579558 RNFT2Q96EX2 444 aa19.83■□□□□ 0.77
SHMT1-206ENST00000579558 WDR13Q9H1Z4 485 aa19.83■□□□□ 0.77
SHMT1-206ENST00000579558 OR51I2Q9H344 312 aa19.83■□□□□ 0.77
SHMT1-206ENST00000579558 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.83■□□□□ 0.77
SHMT1-206ENST00000579558 IGHV3OR16-10A0A075B7F0 116 aa19.82■□□□□ 0.76
SHMT1-206ENST00000579558 TRAV40A0A0B4J280 105 aa19.82■□□□□ 0.76
SHMT1-206ENST00000579558 A0A1B0GW55 424 aa19.82■□□□□ 0.76
SHMT1-206ENST00000579558 FCN3O75636 299 aa19.82■□□□□ 0.76
SHMT1-206ENST00000579558 DUX4L2P0CJ85 424 aa19.82■□□□□ 0.76
SHMT1-206ENST00000579558 DUX4L3P0CJ86 424 aa19.82■□□□□ 0.76
SHMT1-206ENST00000579558 DUX4L4P0CJ87 422 aa19.82■□□□□ 0.76
SHMT1-206ENST00000579558 DUX4L5P0CJ88 424 aa19.82■□□□□ 0.76
SHMT1-206ENST00000579558 DUX4L6P0CJ89 424 aa19.82■□□□□ 0.76
SHMT1-206ENST00000579558 DUX4L7P0CJ90 424 aa19.82■□□□□ 0.76
SHMT1-206ENST00000579558 IGHV4-38-2P0DP08 117 aa19.82■□□□□ 0.76
SHMT1-206ENST00000579558 CLVS2Q5SYC1 327 aa19.82■□□□□ 0.76
SHMT1-206ENST00000579558 STUMQ69YW2 141 aa19.82■□□□□ 0.76
SHMT1-206ENST00000579558 DUX4L9Q6RFH8 374 aaPredicted RBP19.82■□□□□ 0.76
SHMT1-206ENST00000579558 OR5T2Q8NGG2 359 aa19.82■□□□□ 0.76
SHMT1-206ENST00000579558 OR14K1Q8NGZ2 314 aa19.82■□□□□ 0.76
SHMT1-206ENST00000579558 RORBQ92753 470 aa19.82■□□□□ 0.76
SHMT1-206ENST00000579558 STMN2Q93045 179 aa19.82■□□□□ 0.76
SHMT1-206ENST00000579558 MS4A7Q9GZW8 240 aaPredicted RBP19.82■□□□□ 0.76
SHMT1-206ENST00000579558 GPR173Q9NS66 373 aa19.82■□□□□ 0.76
SHMT1-206ENST00000579558 SNTG1Q9NSN8 517 aa19.82■□□□□ 0.76
SHMT1-206ENST00000579558 DUX4Q9UBX2 424 aa19.82■□□□□ 0.76
SHMT1-206ENST00000579558 GNG8Q9UK08 70 aa19.82■□□□□ 0.76
SHMT1-206ENST00000579558 SNTNA6NMZ2 147 aa19.81■□□□□ 0.76
SHMT1-206ENST00000579558 TRIM77I1YAP6 450 aa19.81■□□□□ 0.76
SHMT1-206ENST00000579558 RHBDL1O75783 438 aa19.81■□□□□ 0.76
SHMT1-206ENST00000579558 LIPFP07098 398 aa19.81■□□□□ 0.76
SHMT1-206ENST00000579558 ACTC1P68032 377 aa19.81■□□□□ 0.76
SHMT1-206ENST00000579558 ACTA1P68133 377 aa19.81■□□□□ 0.76
SHMT1-206ENST00000579558 TP53I3Q53FA7 332 aa19.81■□□□□ 0.76
SHMT1-206ENST00000579558 Q6ZSR3 168 aa19.81■□□□□ 0.76
SHMT1-206ENST00000579558 BTN2A1Q7KYR7 527 aa19.81■□□□□ 0.76
SHMT1-206ENST00000579558 BCL6BQ8N143 479 aaPredicted RBP19.81■□□□□ 0.76
SHMT1-206ENST00000579558 FAM216BQ8N7L0 139 aa19.81■□□□□ 0.76
SHMT1-206ENST00000579558 PNLDC1Q8NA58 520 aaKnown RBP19.81■□□□□ 0.76
SHMT1-206ENST00000579558 ACOXLQ9NUZ1 547 aa19.81■□□□□ 0.76
SHMT1-206ENST00000579558 AASSQ9UDR5 926 aa19.81■□□□□ 0.76
SHMT1-206ENST00000579558 A0A1B0GVI7 797 aa19.8■□□□□ 0.76
SHMT1-206ENST00000579558 NKX6-3A6NJ46 265 aa19.8■□□□□ 0.76
SHMT1-206ENST00000579558 DHRS7CA6NNS2 312 aa19.8■□□□□ 0.76
SHMT1-206ENST00000579558 DLGAP1O14490 977 aa19.8■□□□□ 0.76
SHMT1-206ENST00000579558 ECDO95905 644 aaPredicted RBP19.8■□□□□ 0.76
SHMT1-206ENST00000579558 CCL1P22362 96 aa19.8■□□□□ 0.76
SHMT1-206ENST00000579558 GLRA1P23415 457 aa19.8■□□□□ 0.76
SHMT1-206ENST00000579558 TMEM42Q69YG0 159 aa19.8■□□□□ 0.76
SHMT1-206ENST00000579558 HAGHLQ6PII5 290 aaPredicted RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms