RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 DLK2Q6UY11 383 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 CAMKMTQ7Z624 323 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 VASH2Q86V25 355 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 LSRQ86X29 649 aaPredicted RBP3.98□□□□□ -1.77
CDH8-205ENST00000577730 LRRC18Q8N456 261 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 ROBO4Q8WZ75 1007 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 PLAC1Q9HBJ0 212 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 PHRF1Q9P1Y6 1649 aaKnown RBP3.98□□□□□ -1.77
CDH8-205ENST00000577730 TRAV39A0A0B4J263 110 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 B4GALT2O60909 372 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 CXCL14O95715 111 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 CD52P31358 61 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 EGR3Q06889 387 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 ARL16Q0P5N6 197 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 C1orf194Q5T5A4 169 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 USP50Q70EL3 339 aaPredicted RBP3.98□□□□□ -1.77
CDH8-205ENST00000577730 OLIG3Q7RTU3 272 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 PRR18Q8N4B5 295 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 DDIT4LQ96D03 193 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 ADTRPQ96IZ2 230 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 OR2A5Q96R48 311 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 GKN1Q9NS71 199 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 CLN8Q9UBY8 286 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 SPCS1Q9Y6A9 102 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 SPEF2Q9C093 1822 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 A0A1W2PRS3 328 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 HIST1H2BKO60814 126 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 CLEC3AO75596 197 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 HIST1H2BJP06899 126 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 CTXN2P0C2S0 81 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 HIST1H2BOP23527 126 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 HIST1H2BBP33778 126 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 PPICP45877 212 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 HIST1H2BDP58876 126 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 HIST1H2BCP62807 126 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 MLC1Q15049 377 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 HIST2H2BEQ16778 126 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.98□□□□□ -1.77
CDH8-205ENST00000577730 OR4A16Q8NH70 328 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 HIST1H2BHQ93079 126 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 CDCA3Q99618 268 aaPredicted RBP3.98□□□□□ -1.77
CDH8-205ENST00000577730 HIST1H2BNQ99877 126 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 HIST1H2BMQ99879 126 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 HIST1H2BLQ99880 126 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 ABI3Q9P2A4 366 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 TRAV30A0A087WSZ9 112 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 OR7C1O76099 320 aaPredicted RBP3.98□□□□□ -1.77
CDH8-205ENST00000577730 CTSDP07339 412 aaPredicted RBP3.98□□□□□ -1.77
CDH8-205ENST00000577730 GLI4P10075 376 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 OR1D2P34982 312 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 G6PCP35575 357 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 TFPI2P48307 235 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 ACVR1Q04771 509 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 SLCO4C1Q6ZQN7 724 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 CPT1CQ8TCG5 803 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 AQP10Q96PS8 301 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 TRIB1Q96RU8 372 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 GPX7Q96SL4 187 aaPredicted RBP3.98□□□□□ -1.77
CDH8-205ENST00000577730 NXF5Q9H1B4 397 aaKnown RBP3.98□□□□□ -1.77
CDH8-205ENST00000577730 WSB2Q9NYS7 404 aaPredicted RBP3.98□□□□□ -1.77
CDH8-205ENST00000577730 SLC5A6Q9Y289 635 aa3.98□□□□□ -1.77
CDH8-205ENST00000577730 HOXC4P09017 264 aaPredicted RBP3.97□□□□□ -1.77
CDH8-205ENST00000577730 ZNF774Q6NX45 483 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 Q6ZVU0 165 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 HTR3DQ70Z44 454 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 H1FOOQ8IZA3 346 aaPredicted RBP3.97□□□□□ -1.77
CDH8-205ENST00000577730 OR8I2Q8N0Y5 310 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 RAB40CQ96S21 281 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 P2RX4Q99571 388 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 C16orf70Q9BSU1 422 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 PSMG3Q9BT73 122 aaPredicted RBP3.97□□□□□ -1.77
CDH8-205ENST00000577730 SLC2A4RGQ9NR83 387 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 CUTCQ9NTM9 273 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 EDDM13A0A1B0GTR0 161 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 UBE2L5PA0A1B0GUS4 154 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 ALOX12BO75342 701 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 ACTL6AO96019 429 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 CD8AP01732 235 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 GUSBP08236 651 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 WASP42768 502 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 PXNP49023 591 aaPredicted RBP3.97□□□□□ -1.77
CDH8-205ENST00000577730 GNG4P50150 75 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 EWSR1Q01844 656 aaKnown RBP eCLIP3.97□□□□□ -1.77
CDH8-205ENST00000577730 EXT1Q16394 746 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 PARM1Q6UWI2 310 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 TGIF2LYQ8IUE0 185 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 SELENOHQ8IZQ5 122 aaKnown RBP3.97□□□□□ -1.77
CDH8-205ENST00000577730 ARL14EPQ8N8R7 260 aaPredicted RBP3.97□□□□□ -1.77
CDH8-205ENST00000577730 OR51H1Q8NH63 302 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 Q8WTZ3 238 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 TM4SF18Q96CE8 201 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 SLC6A18Q96N87 628 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 CLEC5AQ9NY25 188 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 OR51B4Q9Y5P0 310 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 DIP2AQ14689 1571 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 HELTA6NFD8 242 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 ARPC3O15145 178 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 FGF16O43320 207 aa3.97□□□□□ -1.77
CDH8-205ENST00000577730 COL1A1P02452 1464 aaPredicted RBP3.97□□□□□ -1.77
CDH8-205ENST00000577730 APCSP02743 223 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms