RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 PPP1R3EQ9H7J1 279 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 ZNF696Q9H7X3 374 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 GORASP2Q9H8Y8 452 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 SPAG4Q9NPE6 437 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 KRCC1Q9NPI7 259 aaPredicted RBP5.15□□□□□ -1.59
NUP88-212ENST00000576708 ARL8BQ9NVJ2 186 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 C1orf123Q9NWV4 160 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 DUX4Q9UBX2 424 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 CENPVL3A0A0U1RRI6 287 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 GAGE12BA1L429 117 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 GAGE12HA6NDE8 117 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 GGT3PA6NGU5 568 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 CLDN34H7C241 214 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 M0QYG6 137 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 M0R135 149 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 LGALS8O00214 317 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 TNFRSF13BO14836 293 aaPredicted RBP5.14□□□□□ -1.59
NUP88-212ENST00000576708 ARPC2O15144 300 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 ADAM20O43506 726 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 GYPAP02724 150 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 FABP3P05413 133 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 SPARCP09486 303 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 PPIAL4GP0DN37 164 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 ZNF823P16415 610 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 PRDX6P30041 224 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 CFHR2P36980 270 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 DLX1P56177 255 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 TPTEP56180 551 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 SMIM11AP58511 58 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 KRTAP10-3P60369 221 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 TSPAN31Q12999 210 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 ECH1Q13011 328 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 OR8B8Q15620 311 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 DCDC5Q6ZRR9 648 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 DCXRQ7Z4W1 244 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 ZDHHC21Q8IVQ6 265 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 PDZD9Q8IXQ8 264 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 C1orf87Q8N0U7 546 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 LINC00469Q8N7U9 141 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 SPERTQ8NA61 448 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 SLC37A3Q8NCC5 494 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 PROKR2Q8NFJ6 384 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 OR11L1Q8NGX0 322 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 OR4Q3Q8NH05 313 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 SEH1LQ96EE3 360 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 ZNF799Q96GE5 643 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 NSMCE2Q96MF7 247 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 BTBD10Q9BSF8 475 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 ADAT1Q9BUB4 502 aaKnown RBP5.14□□□□□ -1.59
NUP88-212ENST00000576708 MLST8Q9BVC4 326 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 CHIAQ9BZP6 476 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 TINAGL1Q9GZM7 467 aaPredicted RBP5.14□□□□□ -1.59
NUP88-212ENST00000576708 CENPMQ9NSP4 180 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 VNN3Q9NY84 501 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 RNF7Q9UBF6 113 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 CD300AQ9UGN4 299 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 CDH10Q9Y6N8 788 aa5.14□□□□□ -1.59
NUP88-212ENST00000576708 TRRAPQ9Y4A5 3859 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 A0A1W2PRD5 423 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 A0A1W2PRF3 423 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 A0A1W2PRM7 423 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 A6NLC8 198 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 MARCH11A6NNE9 402 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 SRRM5B3KS81 715 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 ZNF879B4DU55 563 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 H0YHG0 523 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 TNFRSF11BO00300 401 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 BHLHE40O14503 412 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 PHYHO14832 338 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 ENSAO43768 121 aaKnown RBP5.13□□□□□ -1.59
NUP88-212ENST00000576708 IDH3BO43837 385 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 SNX3O60493 162 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 ZNF254O75437 659 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 SOX14O95416 240 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 TFF1P04155 84 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 MELTFP08582 738 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 HSD17B1P14061 328 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 MMP9P14780 707 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 ATP6V1B2P21281 511 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 GMFBP60983 142 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 ARF6P62330 175 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 DEFA6Q01524 100 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 CRMP1Q14194 572 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 HABP2Q14520 560 aaPredicted RBP5.13□□□□□ -1.59
NUP88-212ENST00000576708 GPR157Q5UAW9 335 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 ZNF770Q6IQ21 691 aaPredicted RBP5.13□□□□□ -1.59
NUP88-212ENST00000576708 Q6YL49 198 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 WDR86Q86TI4 376 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 C11orf53Q8IXP5 236 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 DEFB107AQ8IZN7 70 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 GCSAMQ8N6F7 178 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 OR56B2PQ8NGI1 322 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 OR4C15Q8NGM1 316 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 LHX4Q969G2 390 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 SPTSSAQ969W0 71 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 MCUR1Q96AQ8 359 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 SLAMF6Q96DU3 332 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 AMELYQ99218 206 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 CCL13Q99616 98 aa5.13□□□□□ -1.59
NUP88-212ENST00000576708 COPS4Q9BT78 406 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms