RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 APH1AQ96BI3 265 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 WDR89Q96FK6 387 aaPredicted RBP12.22□□□□□ -0.45
VPS33B-208ENST00000574755 RGCCQ9H4X1 137 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 TMEM165Q9HC07 324 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 ACKR4Q9NPB9 350 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 LOC400499M0QZD8 3231 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 DMXL1Q9Y485 3027 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 ZNF724A8MTY0 619 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 CDK2AP1O14519 115 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 TPOP07202 933 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 CPT2P23786 658 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 MPZP25189 248 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 HTR2BP41595 481 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 ZNF92Q03936 586 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 RNPS1Q15287 305 aaKnown RBP12.22□□□□□ -0.45
VPS33B-208ENST00000574755 TMPRSS7Q7RTY8 843 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 CPNE2Q96FN4 548 aaPredicted RBP12.22□□□□□ -0.45
VPS33B-208ENST00000574755 CYYR1Q96J86 154 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 VSIG4Q9Y279 399 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 H3BUI4 141 aa12.21□□□□□ -0.45
VPS33B-208ENST00000574755 RPL36A-HNRNPH2H7BZ11 118 aa12.21□□□□□ -0.45
VPS33B-208ENST00000574755 SLC22A5O76082 557 aa12.21□□□□□ -0.45
VPS33B-208ENST00000574755 PLATP00750 562 aa12.21□□□□□ -0.45
VPS33B-208ENST00000574755 NRASP01111 189 aa12.21□□□□□ -0.45
VPS33B-208ENST00000574755 ZNF35P13682 527 aa12.21□□□□□ -0.45
VPS33B-208ENST00000574755 FAM3AP98173 230 aa12.21□□□□□ -0.45
VPS33B-208ENST00000574755 CLVS2Q5SYC1 327 aa12.21□□□□□ -0.45
VPS33B-208ENST00000574755 TMEM178AQ8NBL3 297 aa12.21□□□□□ -0.45
VPS33B-208ENST00000574755 BORCS8Q96FH0 119 aa12.21□□□□□ -0.45
VPS33B-208ENST00000574755 ZNF552Q9H707 407 aaPredicted RBP12.21□□□□□ -0.45
VPS33B-208ENST00000574755 RNF122Q9H9V4 155 aa12.21□□□□□ -0.45
VPS33B-208ENST00000574755 MYOZ1Q9NP98 299 aaPredicted RBP12.21□□□□□ -0.45
VPS33B-208ENST00000574755 OPN4Q9UHM6 478 aa12.21□□□□□ -0.45
VPS33B-208ENST00000574755 hCG_38984A0A1B0GV85 526 aa12.21□□□□□ -0.46
VPS33B-208ENST00000574755 F5H5P2 479 aa12.21□□□□□ -0.46
VPS33B-208ENST00000574755 NKX2-8O15522 239 aa12.21□□□□□ -0.46
VPS33B-208ENST00000574755 XRCC2O43543 280 aa12.21□□□□□ -0.46
VPS33B-208ENST00000574755 HLA-AP01891 365 aaKnown RBP12.21□□□□□ -0.46
VPS33B-208ENST00000574755 LIPCP11150 499 aa12.21□□□□□ -0.46
VPS33B-208ENST00000574755 CCNOP22674 350 aa12.21□□□□□ -0.46
VPS33B-208ENST00000574755 PRKACBP22694 351 aa12.21□□□□□ -0.46
VPS33B-208ENST00000574755 RBP2P50120 134 aa12.21□□□□□ -0.46
VPS33B-208ENST00000574755 FOXG1P55316 489 aaPredicted RBP12.21□□□□□ -0.46
VPS33B-208ENST00000574755 PER3P56645 1201 aa12.21□□□□□ -0.46
VPS33B-208ENST00000574755 SRSF6Q13247 344 aaKnown RBP12.21□□□□□ -0.46
VPS33B-208ENST00000574755 DHRS2Q13268 280 aa12.21□□□□□ -0.46
VPS33B-208ENST00000574755 MICBQ29980 383 aa12.21□□□□□ -0.46
VPS33B-208ENST00000574755 ZNF100Q8IYN0 542 aa12.21□□□□□ -0.46
VPS33B-208ENST00000574755 C12orf45Q8N5I9 185 aaPredicted RBP12.21□□□□□ -0.46
VPS33B-208ENST00000574755 MRGPRFQ96AM1 343 aa12.21□□□□□ -0.46
VPS33B-208ENST00000574755 RADILQ96JH8 1075 aa12.21□□□□□ -0.46
VPS33B-208ENST00000574755 TM2D1Q9BX74 207 aa12.21□□□□□ -0.46
VPS33B-208ENST00000574755 TRGV5A0A0B4J1U4 118 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 SPRY1O43609 319 aaPredicted RBP12.2□□□□□ -0.46
VPS33B-208ENST00000574755 ANGPTL7O43827 346 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 HLA-HP01893 362 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 CSTBP04080 98 aaKnown RBP12.2□□□□□ -0.46
VPS33B-208ENST00000574755 EDN3P14138 238 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 GABRR1P24046 479 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 SOX8P57073 446 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 DCAF12L2Q5VW00 463 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 TEX261Q6UWH6 196 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 ZDHHC22Q8N966 263 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 FBXW5Q969U6 566 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 OCSTAMPQ9BR26 566 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 PRDM14Q9GZV8 571 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 ASCL3Q9NQ33 180 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 B3GNT2Q9NY97 397 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 ATPIF1Q9UII2 106 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 ANAPC10Q9UM13 185 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 CSAG2Q9Y5P2 127 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 U3KQ87 197 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 IGKV1-27A0A075B6S5 117 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 OR2AT4A6NND4 320 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 FOXI3A8MTJ6 420 aaPredicted RBP12.2□□□□□ -0.46
VPS33B-208ENST00000574755 LRP3O75074 770 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 NAT1P18440 290 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 CBX5P45973 191 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 RSU1Q15404 277 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 STK11Q15831 433 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 RNFT1Q5M7Z0 435 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 ZBTB37Q5TC79 503 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 LHFPL2Q6ZUX7 228 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 ST6GALNAC5Q9BVH7 336 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 C1QTNF5Q9BXJ0 243 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 PECRQ9BY49 303 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 METTL9Q9H1A3 318 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 CLEC4MQ9H2X3 399 aaPredicted RBP12.2□□□□□ -0.46
VPS33B-208ENST00000574755 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.2□□□□□ -0.46
VPS33B-208ENST00000574755 ARHGAP21Q5T5U3 1957 aa12.2□□□□□ -0.46
VPS33B-208ENST00000574755 HTR3BO95264 441 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 CD79AP11912 226 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 TNFSF10P50591 281 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 CCL11P51671 97 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 OR8B8Q15620 311 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 MPPED2Q15777 294 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 ACTBL2Q562R1 376 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 TMEM42Q69YG0 159 aa12.19□□□□□ -0.46
VPS33B-208ENST00000574755 NUFIP2Q7Z417 695 aaKnown RBP12.19□□□□□ -0.46
VPS33B-208ENST00000574755 SLC25A42Q86VD7 318 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms