RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 CSNK2A3Q8NEV1 391 aa14.14□□□□□ -0.15
CCDC40-211ENST00000574099 KCTD14Q9BQ13 255 aaPredicted RBP14.14□□□□□ -0.15
CCDC40-211ENST00000574099 HEXA-AS1Q9H8Q6 139 aa14.14□□□□□ -0.15
CCDC40-211ENST00000574099 ZNF319Q9P2F9 582 aa14.14□□□□□ -0.15
CCDC40-211ENST00000574099 DHRS12A0PJE2 317 aa14.13□□□□□ -0.15
CCDC40-211ENST00000574099 A6NDX4 124 aa14.13□□□□□ -0.15
CCDC40-211ENST00000574099 TMEM210A6NLX4 147 aa14.13□□□□□ -0.15
CCDC40-211ENST00000574099 RHBDL1O75783 438 aa14.13□□□□□ -0.15
CCDC40-211ENST00000574099 GLCEO94923 617 aa14.13□□□□□ -0.15
CCDC40-211ENST00000574099 PSG2P11465 335 aa14.13□□□□□ -0.15
CCDC40-211ENST00000574099 CCL3L1P16619 93 aa14.13□□□□□ -0.15
CCDC40-211ENST00000574099 PAICSP22234 425 aaKnown RBP14.13□□□□□ -0.15
CCDC40-211ENST00000574099 VDAC2P45880 294 aaPredicted RBP14.13□□□□□ -0.15
CCDC40-211ENST00000574099 SLC15A1P46059 708 aa14.13□□□□□ -0.15
CCDC40-211ENST00000574099 EIF2B1Q14232 305 aaKnown RBP14.13□□□□□ -0.15
CCDC40-211ENST00000574099 HPSE2Q8WWQ2 592 aa14.13□□□□□ -0.15
CCDC40-211ENST00000574099 OR5P3Q8WZ94 311 aa14.13□□□□□ -0.15
CCDC40-211ENST00000574099 RNF170Q96K19 258 aa14.13□□□□□ -0.15
CCDC40-211ENST00000574099 YY1AP1Q9H869 796 aa14.13□□□□□ -0.15
CCDC40-211ENST00000574099 ABCB10Q9NRK6 738 aa14.13□□□□□ -0.15
CCDC40-211ENST00000574099 ZNF222Q9UK12 451 aa14.13□□□□□ -0.15
CCDC40-211ENST00000574099 CFL1P23528 166 aaKnown RBP14.12□□□□□ -0.15
CCDC40-211ENST00000574099 ACKR3P25106 362 aa14.12□□□□□ -0.15
CCDC40-211ENST00000574099 FMO3P31513 532 aa14.12□□□□□ -0.15
CCDC40-211ENST00000574099 BLCAPP62952 87 aa14.12□□□□□ -0.15
CCDC40-211ENST00000574099 CCDC121Q6ZUS5 278 aa14.12□□□□□ -0.15
CCDC40-211ENST00000574099 PRSS45Q7RTY3 260 aa14.12□□□□□ -0.15
CCDC40-211ENST00000574099 FTMTQ8N4E7 242 aa14.12□□□□□ -0.15
CCDC40-211ENST00000574099 SLC37A3Q8NCC5 494 aa14.12□□□□□ -0.15
CCDC40-211ENST00000574099 OR5AU1Q8NGC0 362 aa14.12□□□□□ -0.15
CCDC40-211ENST00000574099 OR4M1Q8NGD0 313 aa14.12□□□□□ -0.15
CCDC40-211ENST00000574099 OR52L1Q8NGH7 329 aa14.12□□□□□ -0.15
CCDC40-211ENST00000574099 OR6K6Q8NGW6 343 aa14.12□□□□□ -0.15
CCDC40-211ENST00000574099 OR5K1Q8NHB7 308 aa14.12□□□□□ -0.15
CCDC40-211ENST00000574099 RPS4Y2Q8TD47 263 aa14.12□□□□□ -0.15
CCDC40-211ENST00000574099 PIGCQ92535 297 aa14.12□□□□□ -0.15
CCDC40-211ENST00000574099 PGAM5Q96HS1 289 aa14.12□□□□□ -0.15
CCDC40-211ENST00000574099 OCSTAMPQ9BR26 566 aa14.12□□□□□ -0.15
CCDC40-211ENST00000574099 OR10A2Q9H208 303 aa14.12□□□□□ -0.15
CCDC40-211ENST00000574099 MUC13Q9H3R2 512 aa14.12□□□□□ -0.15
CCDC40-211ENST00000574099 SP140LQ9H930 580 aa14.12□□□□□ -0.15
CCDC40-211ENST00000574099 MPC1Q9Y5U8 109 aa14.12□□□□□ -0.15
CCDC40-211ENST00000574099 VGLL3A8MV65 326 aa14.11□□□□□ -0.15
CCDC40-211ENST00000574099 CLUP10909 449 aa14.11□□□□□ -0.15
CCDC40-211ENST00000574099 DCTDP32321 178 aa14.11□□□□□ -0.15
CCDC40-211ENST00000574099 GSSP48637 474 aa14.11□□□□□ -0.15
CCDC40-211ENST00000574099 GPM6AP51674 278 aa14.11□□□□□ -0.15
CCDC40-211ENST00000574099 RPL31P62899 125 aaKnown RBP14.11□□□□□ -0.15
CCDC40-211ENST00000574099 CD83Q01151 205 aa14.11□□□□□ -0.15
CCDC40-211ENST00000574099 C11orf42Q8N5U0 333 aa14.11□□□□□ -0.15
CCDC40-211ENST00000574099 OR52H1Q8NGJ2 320 aa14.11□□□□□ -0.15
CCDC40-211ENST00000574099 RCC1LQ96I51 464 aaKnown RBP14.11□□□□□ -0.15
CCDC40-211ENST00000574099 B9D2Q9BPU9 175 aa14.11□□□□□ -0.15
CCDC40-211ENST00000574099 SYNGR1O43759 233 aa14.1□□□□□ -0.15
CCDC40-211ENST00000574099 ARG1P05089 322 aa14.1□□□□□ -0.15
CCDC40-211ENST00000574099 JUNBP17275 347 aaPredicted RBP14.1□□□□□ -0.15
CCDC40-211ENST00000574099 SMIM11AP58511 58 aa14.1□□□□□ -0.15
CCDC40-211ENST00000574099 TSPAN31Q12999 210 aa14.1□□□□□ -0.15
CCDC40-211ENST00000574099 CRMP1Q14194 572 aa14.1□□□□□ -0.15
CCDC40-211ENST00000574099 ZNF273Q14593 569 aa14.1□□□□□ -0.15
CCDC40-211ENST00000574099 SNCBQ16143 134 aa14.1□□□□□ -0.15
CCDC40-211ENST00000574099 SSX2Q16385 188 aa14.1□□□□□ -0.15
CCDC40-211ENST00000574099 TMEM200BQ69YZ2 307 aa14.1□□□□□ -0.15
CCDC40-211ENST00000574099 CGB2Q6NT52 195 aa14.1□□□□□ -0.15
CCDC40-211ENST00000574099 THAP5Q7Z6K1 395 aa14.1□□□□□ -0.15
CCDC40-211ENST00000574099 TIGD4Q8IY51 512 aa14.1□□□□□ -0.15
CCDC40-211ENST00000574099 ZDHHC23Q8IYP9 409 aa14.1□□□□□ -0.15
CCDC40-211ENST00000574099 OR6N2Q8NGY6 317 aa14.1□□□□□ -0.15
CCDC40-211ENST00000574099 GNPDA2Q8TDQ7 276 aa14.1□□□□□ -0.15
CCDC40-211ENST00000574099 USE1Q9NZ43 259 aa14.1□□□□□ -0.15
CCDC40-211ENST00000574099 PITPNC1Q9UKF7 332 aa14.1□□□□□ -0.15
CCDC40-211ENST00000574099 SAMD4AQ9UPU9 718 aaKnown RBP14.1□□□□□ -0.15
CCDC40-211ENST00000574099 CDH10Q9Y6N8 788 aa14.1□□□□□ -0.15
CCDC40-211ENST00000574099 A0A1W2PPH5 198 aa14.09□□□□□ -0.15
CCDC40-211ENST00000574099 FAM90A8PA6NJQ4 464 aa14.09□□□□□ -0.15
CCDC40-211ENST00000574099 E9PQ18 207 aa14.09□□□□□ -0.15
CCDC40-211ENST00000574099 IFNGR2P38484 337 aa14.09□□□□□ -0.15
CCDC40-211ENST00000574099 CEBPDP49716 269 aaPredicted RBP14.09□□□□□ -0.15
CCDC40-211ENST00000574099 SLC25A1P53007 311 aa14.09□□□□□ -0.15
CCDC40-211ENST00000574099 FAM76BQ5HYJ3 339 aa14.09□□□□□ -0.15
CCDC40-211ENST00000574099 DMRTC1Q5HYR2 192 aa14.09□□□□□ -0.15
CCDC40-211ENST00000574099 KHDC1LQ5JSQ8 128 aa14.09□□□□□ -0.15
CCDC40-211ENST00000574099 TEX30Q5JUR7 227 aa14.09□□□□□ -0.15
CCDC40-211ENST00000574099 LDLRAD2Q5SZI1 272 aa14.09□□□□□ -0.15
CCDC40-211ENST00000574099 GLYATQ6IB77 296 aa14.09□□□□□ -0.15
CCDC40-211ENST00000574099 C8orf82Q6P1X6 216 aaPredicted RBP14.09□□□□□ -0.15
CCDC40-211ENST00000574099 OR8D4Q8NGM9 314 aa14.09□□□□□ -0.15
CCDC40-211ENST00000574099 SDSLQ96GA7 329 aa14.09□□□□□ -0.15
CCDC40-211ENST00000574099 AMELYQ99218 206 aa14.09□□□□□ -0.15
CCDC40-211ENST00000574099 HOPXQ9BPY8 73 aaPredicted RBP14.09□□□□□ -0.15
CCDC40-211ENST00000574099 ABHD6Q9BV23 337 aa14.09□□□□□ -0.15
CCDC40-211ENST00000574099 ABCB9Q9NP78 766 aa14.09□□□□□ -0.15
CCDC40-211ENST00000574099 DCAF13Q9NV06 445 aaKnown RBP14.09□□□□□ -0.15
CCDC40-211ENST00000574099 FGFR1OP2Q9NVK5 253 aa14.09□□□□□ -0.15
CCDC40-211ENST00000574099 CD300AQ9UGN4 299 aa14.09□□□□□ -0.15
CCDC40-211ENST00000574099 hCG_1809904A0A1W2PP81 198 aa14.08□□□□□ -0.16
CCDC40-211ENST00000574099 A0A1W2PPE2 198 aa14.08□□□□□ -0.16
CCDC40-211ENST00000574099 A0A1W2PR64 198 aa14.08□□□□□ -0.16
CCDC40-211ENST00000574099 A0A1W2PRV1 198 aa14.08□□□□□ -0.16
CCDC40-211ENST00000574099 TCRBV4S1A1TA0A5B7 111 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms