RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 NT5EP21589 574 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 AGTR1P30556 359 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 OR3A1P47881 315 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 NPBWR1P48145 328 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 CCT3P49368 545 aaKnown RBP4.42□□□□□ -1.7
SF3B3-214ENST00000572365 VEGFCP49767 419 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 ARHGDIBP52566 201 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 CDKN2DP55273 166 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 PSME3P61289 254 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 CHRNB3Q05901 458 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 C17orf67Q0P5P2 114 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 PLCXD2Q0VAA5 305 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 OPCMLQ14982 345 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 FASTKD3Q14CZ7 662 aaKnown RBP4.42□□□□□ -1.7
SF3B3-214ENST00000572365 ZSWIM7Q19AV6 140 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 C9orf135Q5VTT2 229 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 RUSC1-AS1Q66K80 236 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 ZNF470Q6ECI4 717 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 GPRIN3Q6ZVF9 776 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 PAGE2Q7Z2X7 111 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 GALNT10Q86SR1 603 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 LHFPL3Q86UP9 236 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 DND1Q8IYX4 353 aaKnown RBP4.42□□□□□ -1.7
SF3B3-214ENST00000572365 EIF4E3Q8N5X7 224 aaKnown RBP4.42□□□□□ -1.7
SF3B3-214ENST00000572365 ZNF615Q8N8J6 731 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 FBXO36Q8NEA4 188 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 ATP6V1C2Q8NEY4 427 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 BPIFB6Q8NFQ5 453 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 OR4C3Q8NH37 302 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 OR10D3Q8NH80 312 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 CLHC1Q8NHS4 586 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 RNASE11Q8TAA1 199 aaKnown RBP4.42□□□□□ -1.7
SF3B3-214ENST00000572365 SLC7A6Q92536 515 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 YIPF5Q969M3 257 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 TMEM186Q96B77 213 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 MUCL1Q96DR8 90 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 GMPPAQ96IJ6 420 aaPredicted RBP4.42□□□□□ -1.7
SF3B3-214ENST00000572365 C1orf147Q96MC9 270 aaPredicted RBP4.42□□□□□ -1.7
SF3B3-214ENST00000572365 RNF145Q96MT1 663 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 RBM4BQ9BQ04 359 aaKnown RBP4.42□□□□□ -1.7
SF3B3-214ENST00000572365 KLHDC3Q9BQ90 382 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 TBCDQ9BTW9 1192 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 NXF2Q9GZY0 626 aaKnown RBP4.42□□□□□ -1.7
SF3B3-214ENST00000572365 RIMS4Q9H426 269 aaPredicted RBP4.42□□□□□ -1.7
SF3B3-214ENST00000572365 NTN4Q9HB63 628 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 EXD2Q9NVH0 621 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 PAK5Q9P286 719 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 UBQLN2Q9UHD9 624 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 CYB5R1Q9UHQ9 305 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 SPATA2Q9UM82 520 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 MAB21L2Q9Y586 359 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 DNAH9Q9NYC9 4486 aa4.42□□□□□ -1.7
SF3B3-214ENST00000572365 RYR2Q92736 4967 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 IGHV3OR16-10A0A075B7F0 116 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 A0A0J9YW62 118 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 MEIOCA2RUB1 952 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 CFLARO15519 480 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 PCDH7O60245 1069 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 SS18L1O75177 396 aaPredicted RBP4.41□□□□□ -1.7
SF3B3-214ENST00000572365 RAD51DO75771 328 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 SYNGR4O95473 234 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 GPR75O95800 540 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 RBP1P09455 135 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 RRASP10301 218 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 HSD17B1P14061 328 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 GPX3P22352 226 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 CRHBPP24387 322 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 COL8A2P25067 703 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 SHC1P29353 583 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 DUTP33316 252 aaKnown RBP4.41□□□□□ -1.7
SF3B3-214ENST00000572365 SFTPDP35247 375 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 NUP62P37198 522 aaPredicted RBP4.41□□□□□ -1.7
SF3B3-214ENST00000572365 FEN1P39748 380 aaKnown RBP4.41□□□□□ -1.7
SF3B3-214ENST00000572365 SLC1A2P43004 574 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 KHKP50053 298 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 RPL14P50914 215 aaKnown RBP4.41□□□□□ -1.7
SF3B3-214ENST00000572365 TSPAN5P62079 268 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 ADARB1P78563 741 aaKnown RBP4.41□□□□□ -1.7
SF3B3-214ENST00000572365 IGLV3-21P80748 117 aaPredicted RBP4.41□□□□□ -1.7
SF3B3-214ENST00000572365 HSF2Q03933 536 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 HNRNPA0Q13151 305 aaKnown RBP4.41□□□□□ -1.7
SF3B3-214ENST00000572365 GPR50Q13585 617 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 DDX39BQ13838 428 aaKnown RBP4.41□□□□□ -1.7
SF3B3-214ENST00000572365 QPRTQ15274 297 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 SYT6Q5T7P8 510 aaPredicted RBP4.41□□□□□ -1.7
SF3B3-214ENST00000572365 LCN1P1Q5VSP4 162 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 ANKRD22Q5VYY1 191 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 ASPHD2Q6ICH7 369 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 ZNF770Q6IQ21 691 aaPredicted RBP4.41□□□□□ -1.7
SF3B3-214ENST00000572365 LCN8Q6JVE9 175 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 C3orf33Q6P1S2 294 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 TFAP2EQ6VUC0 442 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 GDPGP1Q6ZNW5 385 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 MARCH3Q86UD3 253 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 ANKRD46Q86W74 232 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 CCDC36Q8IYA8 594 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 METTL4Q8N3J2 472 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 NAT8LQ8N9F0 302 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 OR2M3Q8NG83 312 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 OR2T11Q8NH01 316 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms