RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 PCSK6P29122 969 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 AQP1P29972 269 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 HPCAL1P37235 193 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 RPS19P39019 145 aaKnown RBP3.11□□□□□ -1.91
SMG6-208ENST00000570874 DDOSTP39656 456 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 RFC3P40938 356 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 PMELP40967 661 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 AKR1C3P42330 323 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 SSR2P43308 183 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 AKR1D1P51857 326 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 GFERP55789 205 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 TMEM50BP56557 158 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 BTN3A2P78410 334 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 PRR5P85299 388 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 ZXDAP98168 799 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 ID2Q02363 134 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 ZNF91Q05481 1191 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 OXA1LQ15070 435 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 RGNQ15493 299 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 MPPED2Q15777 294 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 GRK1Q15835 563 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 NRF1Q16656 503 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 ATP6V1FQ16864 119 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 PRTGQ2VWP7 1150 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 SMIM21Q3B7S5 101 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 SNAI3Q3KNW1 292 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 PLEKHN1Q494U1 663 aaPredicted RBP3.11□□□□□ -1.91
SMG6-208ENST00000570874 EIPR1Q53HC9 387 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 CT45A2Q5DJT8 189 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 LY6G6FQ5SQ64 297 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 DNLZQ5SXM8 178 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 LCE4AQ5TA78 99 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 UBE2UQ5VVX9 321 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 FBXW9Q5XUX1 488 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 LEMD1Q68G75 181 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 SPNS3Q6ZMD2 512 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 TMPRSS11FQ6ZWK6 438 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 PRSS48Q7RTY5 328 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 TSEN54Q7Z6J9 526 aaKnown RBP3.11□□□□□ -1.91
SMG6-208ENST00000570874 MOB3BQ86TA1 216 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 DTX1Q86Y01 620 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 ZDHHC13Q8IUH4 622 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 SKA3Q8IX90 412 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 OR4N5Q8IXE1 308 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 C8orf59Q8N0T1 100 aaPredicted RBP3.11□□□□□ -1.91
SMG6-208ENST00000570874 CENPSQ8N2Z9 138 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 SPEM1Q8N4L4 309 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 CBR4Q8N4T8 237 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 RAB42Q8N4Z0 105 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 GCSAMQ8N6F7 178 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 ACOT4Q8N9L9 421 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 ZSCAN4Q8NAM6 433 aaPredicted RBP3.11□□□□□ -1.91
SMG6-208ENST00000570874 POC1AQ8NBT0 407 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 OR1M1Q8NGA1 313 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 OR10G3Q8NGC4 313 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 OR10V1Q8NGI7 309 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 OR52I1Q8NGK6 324 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 OR6M1Q8NGM8 313 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 OR2AJ1Q8NGZ0 328 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 SAP25Q8TEE9 199 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 ASB10Q8WXI3 467 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 ASB17Q8WXJ9 295 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 BAALCQ8WXS3 180 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 TMEM37Q8WXS4 190 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 RGP1Q92546 391 aaPredicted RBP3.11□□□□□ -1.91
SMG6-208ENST00000570874 RAB8BQ92930 207 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 CLDN23Q96B33 292 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 RNF183Q96D59 192 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 MRPL53Q96EL3 112 aaKnown RBP3.11□□□□□ -1.91
SMG6-208ENST00000570874 CNRIP1Q96F85 164 aaPredicted RBP3.11□□□□□ -1.91
SMG6-208ENST00000570874 C14orf144Q96I85 54 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 CXorf58Q96LI9 332 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 CCDC115Q96NT0 180 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 OR2A5Q96R48 311 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 DCLRE1CQ96SD1 692 aaKnown RBP3.11□□□□□ -1.91
SMG6-208ENST00000570874 WFDC6Q9BQY6 131 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 MED18Q9BUE0 208 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 RAB11FIP5Q9BXF6 653 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 PRRG4Q9BZD6 226 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 COMMD4Q9H0A8 199 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 DPAGT1Q9H3H5 408 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 GLIPR2Q9H4G4 154 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 SIAEQ9HAT2 523 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 MIEF1Q9NQG6 463 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 SCN3BQ9NY72 215 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 NPAP1Q9NZP6 1156 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 GHRLQ9UBU3 117 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 MIOXQ9UGB7 285 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 ST6GALNAC2Q9UJ37 374 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 PURGQ9UJV8 347 aaKnown RBP3.11□□□□□ -1.91
SMG6-208ENST00000570874 PILRAQ9UKJ1 303 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 OAZ3Q9UMX2 235 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 ANGPT4Q9Y264 503 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 SLC6A5Q9Y345 797 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 TMED7Q9Y3B3 224 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 TPRKBQ9Y3C4 175 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 ORC6Q9Y5N6 252 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 HEBP2Q9Y5Z4 205 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 KCNE3Q9Y6H6 103 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 COLEC10Q9Y6Z7 277 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms