RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 RAB6AP20340 208 aa9.41□□□□□ -0.9
PDXDC1-216ENST00000569715 GPR176Q14439 515 aa9.41□□□□□ -0.9
PDXDC1-216ENST00000569715 CNN3Q15417 329 aaKnown RBP9.41□□□□□ -0.9
PDXDC1-216ENST00000569715 IGFBP7Q16270 282 aa9.41□□□□□ -0.9
PDXDC1-216ENST00000569715 C17orf78Q8N4C9 275 aa9.41□□□□□ -0.9
PDXDC1-216ENST00000569715 PTX4Q96A99 478 aa9.41□□□□□ -0.9
PDXDC1-216ENST00000569715 SPSB1Q96BD6 273 aa9.41□□□□□ -0.9
PDXDC1-216ENST00000569715 SLC22A4Q9H015 551 aa9.41□□□□□ -0.9
PDXDC1-216ENST00000569715 ING4Q9UNL4 249 aa9.41□□□□□ -0.9
PDXDC1-216ENST00000569715 SLC25A15Q9Y619 301 aa9.41□□□□□ -0.9
PDXDC1-216ENST00000569715 CADP27708 2225 aa9.41□□□□□ -0.9
PDXDC1-216ENST00000569715 ACACBO00763 2458 aa9.41□□□□□ -0.9
PDXDC1-216ENST00000569715 COL6A6A6NMZ7 2263 aa9.41□□□□□ -0.9
PDXDC1-216ENST00000569715 CD300LBA8K4G0 201 aa9.4□□□□□ -0.9
PDXDC1-216ENST00000569715 CDC14BO60729 498 aa9.4□□□□□ -0.9
PDXDC1-216ENST00000569715 FCER2P06734 321 aa9.4□□□□□ -0.9
PDXDC1-216ENST00000569715 FAM27E3Q08E93 113 aa9.4□□□□□ -0.9
PDXDC1-216ENST00000569715 TMEM255AQ5JRV8 349 aa9.4□□□□□ -0.9
PDXDC1-216ENST00000569715 OR2T2Q6IF00 324 aa9.4□□□□□ -0.9
PDXDC1-216ENST00000569715 C22orf34Q6ZV56 151 aa9.4□□□□□ -0.9
PDXDC1-216ENST00000569715 PNLDC1Q8NA58 520 aaKnown RBP9.4□□□□□ -0.9
PDXDC1-216ENST00000569715 HPSE2Q8WWQ2 592 aa9.4□□□□□ -0.9
PDXDC1-216ENST00000569715 PHF21AQ96BD5 680 aa9.4□□□□□ -0.9
PDXDC1-216ENST00000569715 OR2J1Q9GZK6 312 aa9.4□□□□□ -0.9
PDXDC1-216ENST00000569715 LPAR5Q9H1C0 372 aa9.4□□□□□ -0.9
PDXDC1-216ENST00000569715 IGHV1-18A0A0C4DH31 117 aa9.4□□□□□ -0.9
PDXDC1-216ENST00000569715 CRTAPO75718 401 aaPredicted RBP9.4□□□□□ -0.9
PDXDC1-216ENST00000569715 BTCP35070 178 aa9.4□□□□□ -0.9
PDXDC1-216ENST00000569715 VEGFCP49767 419 aa9.4□□□□□ -0.9
PDXDC1-216ENST00000569715 PRDX4Q13162 271 aa9.4□□□□□ -0.9
PDXDC1-216ENST00000569715 KLF9Q13886 244 aaPredicted RBP9.4□□□□□ -0.9
PDXDC1-216ENST00000569715 RELL2Q8NC24 303 aaPredicted RBP9.4□□□□□ -0.9
PDXDC1-216ENST00000569715 BORCS8Q96FH0 119 aa9.4□□□□□ -0.9
PDXDC1-216ENST00000569715 FBLN5Q9UBX5 448 aa9.4□□□□□ -0.9
PDXDC1-216ENST00000569715 A8MXE2 369 aa9.4□□□□□ -0.91
PDXDC1-216ENST00000569715 SERPINA2P20848 420 aa9.4□□□□□ -0.91
PDXDC1-216ENST00000569715 CCKARP32238 428 aa9.4□□□□□ -0.91
PDXDC1-216ENST00000569715 PPP1CBP62140 327 aa9.4□□□□□ -0.91
PDXDC1-216ENST00000569715 TOMM5Q8N4H5 51 aa9.4□□□□□ -0.91
PDXDC1-216ENST00000569715 FCAMRQ8WWV6 532 aa9.4□□□□□ -0.91
PDXDC1-216ENST00000569715 ELL3Q9HB65 397 aaPredicted RBP9.4□□□□□ -0.91
PDXDC1-216ENST00000569715 RBMX2Q9Y388 322 aaKnown RBP9.4□□□□□ -0.91
PDXDC1-216ENST00000569715 FUOMA2VDF0 154 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 TMEM235A6NFC5 223 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 MSTNO14793 375 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 IGLV1-44P01699 117 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 PRKACBP22694 351 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 OPRM1P35372 400 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 RBP2P50120 134 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 CAPZA1P52907 286 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 TMEM59Q9BXS4 323 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 RBFOX1Q9NWB1 397 aaKnown RBP9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 NPAP1Q9NZP6 1156 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 CACNG2Q9Y698 323 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 ICMTO60725 284 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 MT-ND4P03905 459 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 TMEM225BP0DP42 221 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 ZNF35P13682 527 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 CALCRP30988 508 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 ALKBH6Q3KRA9 238 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 ZBTB37Q5TC79 503 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 DNM1P46Q6ZS02 220 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 OR2W3Q7Z3T1 314 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 CALHM1Q8IU99 346 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 SLC25A40Q8TBP6 338 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 NEK6Q9HC98 313 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 NLKQ9UBE8 527 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 RABL2AQ9UBK7 228 aaPredicted RBP9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 EIF3KQ9UBQ5 218 aaKnown RBP9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 RABL2BQ9UNT1 228 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 IGKV1-12A0A0C4DH73 117 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 IGKV1D-12P01611 117 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 ALDH3B1P43353 468 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 UCP2P55851 309 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 FAAP20Q6NZ36 180 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 LHFPL2Q6ZUX7 228 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 CADM3Q8N126 398 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 BATF2Q8N1L9 274 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 OR5L1Q8NGL2 311 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 OR1J1Q8NGS3 322 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 KCNG3Q8TAE7 436 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 ENKURQ8TC29 256 aa9.39□□□□□ -0.91
PDXDC1-216ENST00000569715 SOCS1O15524 211 aa9.38□□□□□ -0.91
PDXDC1-216ENST00000569715 MGMTP16455 207 aa9.38□□□□□ -0.91
PDXDC1-216ENST00000569715 PSMB1P20618 241 aaKnown RBP9.38□□□□□ -0.91
PDXDC1-216ENST00000569715 ZNF83P51522 516 aa9.38□□□□□ -0.91
PDXDC1-216ENST00000569715 BCAP31P51572 246 aa9.38□□□□□ -0.91
PDXDC1-216ENST00000569715 GPM6AP51674 278 aa9.38□□□□□ -0.91
PDXDC1-216ENST00000569715 FUT6P51993 359 aa9.38□□□□□ -0.91
PDXDC1-216ENST00000569715 RBPJQ06330 500 aa9.38□□□□□ -0.91
PDXDC1-216ENST00000569715 MRPL49Q13405 166 aaKnown RBP9.38□□□□□ -0.91
PDXDC1-216ENST00000569715 CARTPTQ16568 116 aa9.38□□□□□ -0.91
PDXDC1-216ENST00000569715 OLFML2AQ68BL7 652 aa9.38□□□□□ -0.91
PDXDC1-216ENST00000569715 ACTR6Q9GZN1 396 aa9.38□□□□□ -0.91
PDXDC1-216ENST00000569715 AMDHD2Q9Y303 409 aa9.38□□□□□ -0.91
PDXDC1-216ENST00000569715 IGHV2OR16-5A0A0B4J2B6 119 aa9.38□□□□□ -0.91
PDXDC1-216ENST00000569715 METTL21EPA6NDL7 271 aa9.38□□□□□ -0.91
PDXDC1-216ENST00000569715 CST4P01036 141 aa9.38□□□□□ -0.91
PDXDC1-216ENST00000569715 UBBP0CG47 229 aa9.38□□□□□ -0.91
PDXDC1-216ENST00000569715 GNB3P16520 340 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms