RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 PHLDA2Q53GA4 152 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 ZNF468Q5VIY5 522 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-216ENST00000569240 FAM78BQ5VT40 261 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 ALKBH2Q6NS38 261 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 ZNF813Q6ZN06 617 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 TCEAL8Q8IYN2 117 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 OR2I1PQ8NGU4 316 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 Q96M85 177 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 HDAC8Q9BY41 377 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-216ENST00000569240 NXT1Q9UKK6 140 aaKnown RBP6.4□□□□□ -1.38
CNOT1-216ENST00000569240 PRSS21Q9Y6M0 314 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 PRSS37A4D1T9 235 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 C17orf105B2RV13 164 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 MASP2O00187 686 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 DUX1O43812 170 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 HKR1P10072 659 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 LIAT1Q6ZQX7 453 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 TMPRSS9Q7Z410 1059 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 MYPOPQ86VE0 399 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-216ENST00000569240 ALKBH4Q9NXW9 302 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 CISD1Q9NZ45 108 aaKnown RBP6.4□□□□□ -1.38
CNOT1-216ENST00000569240 LOXHD1Q8IVV2 1947 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 ITGB1BP1O14713 200 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 B4GALT3O60512 393 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 CHRNB4P30926 498 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 DUSP3P51452 185 aaPredicted RBP6.4□□□□□ -1.39
CNOT1-216ENST00000569240 BCDIN3DQ7Z5W3 292 aaKnown RBP6.4□□□□□ -1.39
CNOT1-216ENST00000569240 CDC20BQ86Y33 519 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 LINC00346Q8IVM7 164 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 JSRP1Q96MG2 331 aaPredicted RBP6.4□□□□□ -1.39
CNOT1-216ENST00000569240 KLF16Q9BXK1 252 aaPredicted RBP6.4□□□□□ -1.39
CNOT1-216ENST00000569240 MTCH1Q9NZJ7 389 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 TUBD1Q9UJT1 453 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 SIGLEC7Q9Y286 467 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 IFITM10A6NMD0 228 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 SLC38A11Q08AI6 406 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 SQSTM1Q13501 440 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 IER5LQ5T953 404 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 SIRT6Q8N6T7 355 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 OR5C1Q8NGR4 320 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 ELOVL1Q9BW60 279 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 CGGBP1Q9UFW8 167 aaPredicted RBP6.4□□□□□ -1.39
CNOT1-216ENST00000569240 WASHC3Q9Y3C0 194 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 MYO5AQ9Y4I1 1855 aaKnown RBP6.4□□□□□ -1.39
CNOT1-216ENST00000569240 A0A1B0GU03 582 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 OR2M5A3KFT3 312 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 CTSVO60911 334 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 SCGB1C2P0DMR2 95 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 FUT3P21217 361 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 RABIFP47224 123 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 MVDP53602 400 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 DEFB128Q7Z7B8 93 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 GATSQ8NAP1 163 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 OR5AR1Q8NGP9 310 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 ZBP1Q9H171 429 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 ASCL3Q9NQ33 180 aa6.4□□□□□ -1.39
CNOT1-216ENST00000569240 YBX2Q9Y2T7 364 aaKnown RBP6.4□□□□□ -1.39
CNOT1-216ENST00000569240 CCR5P51681 352 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 CTBSQ01459 385 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 TMEM267Q0VDI3 215 aaPredicted RBP6.39□□□□□ -1.39
CNOT1-216ENST00000569240 OR8G2PQ6IF36 304 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 NHLRC1Q6VVB1 395 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 MAMSTRQ6ZN01 415 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 SLAMF6Q96DU3 332 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 C16orf70Q9BSU1 422 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 MCTS1Q9ULC4 181 aaKnown RBP6.39□□□□□ -1.39
CNOT1-216ENST00000569240 P04436 131 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 FSTP19883 344 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 FUT6P51993 359 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 SOX4Q06945 474 aaPredicted RBP6.39□□□□□ -1.39
CNOT1-216ENST00000569240 ARL16Q0P5N6 197 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 HIKESHIQ53FT3 197 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 ZNF542PQ5EBM4 170 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 RHNO1Q9BSD3 238 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 PIGLQ9Y2B2 252 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 ARFGEF2Q9Y6D5 1785 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 RIMS1Q86UR5 1692 aaKnown RBP6.39□□□□□ -1.39
CNOT1-216ENST00000569240 CORTO00230 105 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 PLPP1O14494 284 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 HCRTR1O43613 425 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 IGLV3-25P01717 112 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 IGHEP01854 428 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 GCH1P30793 250 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 RIGQ13278 110 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 HERPUD1Q15011 391 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 JOSD1Q15040 202 aaPredicted RBP6.39□□□□□ -1.39
CNOT1-216ENST00000569240 KIAA0040Q15053 153 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 SPANXN5Q5MJ07 72 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 RTL8AQ9BWD3 113 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 TMEM242Q9NWH2 141 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 FCER1GP30273 86 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 CCR2P41597 374 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 NUTF2P61970 127 aaKnown RBP6.39□□□□□ -1.39
CNOT1-216ENST00000569240 RNASEKQ6P5S7 137 aaKnown RBP6.39□□□□□ -1.39
CNOT1-216ENST00000569240 SLC25A26Q70HW3 274 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 ZNF573Q86YE8 665 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 ADAT1Q9BUB4 502 aaKnown RBP6.39□□□□□ -1.39
CNOT1-216ENST00000569240 TLNRD1Q9H1K6 362 aa6.39□□□□□ -1.39
CNOT1-216ENST00000569240 FUT9Q9Y231 359 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms