RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 NUFIP1Q9UHK0 495 aaKnown RBP10.79□□□□□ -0.68
TSC2-220ENST00000568238 CLEC2DQ9UHP7 191 aa10.79□□□□□ -0.68
TSC2-220ENST00000568238 SLC22A13Q9Y226 551 aa10.79□□□□□ -0.68
TSC2-220ENST00000568238 INSIG2Q9Y5U4 225 aa10.79□□□□□ -0.68
TSC2-220ENST00000568238 SNX5Q9Y5X3 404 aa10.79□□□□□ -0.68
TSC2-220ENST00000568238 AUP1Q9Y679 476 aa10.79□□□□□ -0.68
TSC2-220ENST00000568238 PKD1L1Q8TDX9 2849 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 hCG_38984A0A1B0GV85 526 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 ACOD1A6NK06 481 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 CD300LBA8K4G0 201 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 DENRO43583 198 aaKnown RBP10.78□□□□□ -0.68
TSC2-220ENST00000568238 TTRP02766 147 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 IRF2P14316 349 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 C21orf33P30042 268 aaPredicted RBP10.78□□□□□ -0.68
TSC2-220ENST00000568238 MED21Q13503 144 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 WDR38Q5JTN6 314 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 OR2G6Q5TZ20 316 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 TMPRSS11AQ6ZMR5 421 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 NLRC3Q7RTR2 1065 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 KCTD20Q7Z5Y7 419 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 CATSPERDQ86XM0 798 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 KLBQ86Z14 1044 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 SYS1Q8N2H4 156 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 CELF2-AS1Q8N7Q2 184 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 OR56B2PQ8NGI1 322 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 GCDHQ92947 438 aaPredicted RBP10.78□□□□□ -0.68
TSC2-220ENST00000568238 DVL3Q92997 716 aaPredicted RBP10.78□□□□□ -0.68
TSC2-220ENST00000568238 RNF166Q96A37 237 aaPredicted RBP10.78□□□□□ -0.68
TSC2-220ENST00000568238 FAM71F1Q96KD3 344 aaPredicted RBP10.78□□□□□ -0.68
TSC2-220ENST00000568238 LYZL4Q96KX0 146 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 RGCCQ9H4X1 137 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 OPA3Q9H6K4 179 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 ESM1Q9NQ30 184 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 GPR84Q9NQS5 396 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 ERVK-18Q9QC07 812 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 MIOXQ9UGB7 285 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 NUP50Q9UKX7 468 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 NOP16Q9Y3C1 178 aaKnown RBP10.78□□□□□ -0.68
TSC2-220ENST00000568238 TPRKBQ9Y3C4 175 aa10.78□□□□□ -0.68
TSC2-220ENST00000568238 TRRAPQ9Y4A5 3859 aa10.77□□□□□ -0.68
TSC2-220ENST00000568238 A0A0U1RQV5 110 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 E9PI62 339 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 H3BSH0 61 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 P2RY10O00398 339 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 MYL12BO14950 172 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 FSTL3O95633 263 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 CDK1P06493 297 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 HTR1AP08908 422 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 WNT2P09544 360 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 CCDC159P0C7I6 412 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 CFL1P23528 166 aaKnown RBP10.77□□□□□ -0.69
TSC2-220ENST00000568238 CRHBPP24387 322 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 CFPP27918 469 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 CD200P41217 278 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 KIR3DL2P43630 455 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 COMPP49747 757 aaPredicted RBP10.77□□□□□ -0.69
TSC2-220ENST00000568238 GSK3AP49840 483 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 GBX2P52951 348 aaPredicted RBP10.77□□□□□ -0.69
TSC2-220ENST00000568238 NANOS3P60323 173 aaKnown RBP10.77□□□□□ -0.69
TSC2-220ENST00000568238 GNB2P62879 340 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 FAM3AP98173 230 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 MAB21L1Q13394 359 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 OR8G1Q15617 311 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 ZNF404Q494X3 552 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 RBMS3Q6XE24 437 aaKnown RBP10.77□□□□□ -0.69
TSC2-220ENST00000568238 ELMOD2Q8IZ81 293 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 PRSS35Q8N3Z0 413 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 ZDHHC22Q8N966 263 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 OR8B3Q8NGG8 313 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 OR11L1Q8NGX0 322 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 OR2G2Q8NGZ5 317 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 Q8TCH9 128 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 MYDGFQ969H8 173 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 ERGIC1Q969X5 290 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 NEIL1Q96FI4 390 aaPredicted RBP10.77□□□□□ -0.69
TSC2-220ENST00000568238 OR8B2Q96RD0 313 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 TMEM246Q9BRR3 403 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 ADAT1Q9BUB4 502 aaKnown RBP10.77□□□□□ -0.69
TSC2-220ENST00000568238 SLC22A4Q9H015 551 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 TMEM165Q9HC07 324 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 CAB39Q9Y376 341 aaPredicted RBP10.77□□□□□ -0.69
TSC2-220ENST00000568238 PPIAL4AQ9Y536 164 aa10.77□□□□□ -0.69
TSC2-220ENST00000568238 IGHV2-70DA0A0C4DH43 119 aa10.76□□□□□ -0.69
TSC2-220ENST00000568238 TMEM89A2RUT3 159 aa10.76□□□□□ -0.69
TSC2-220ENST00000568238 MT-ND2P03891 347 aa10.76□□□□□ -0.69
TSC2-220ENST00000568238 CA6P23280 308 aa10.76□□□□□ -0.69
TSC2-220ENST00000568238 EEF1B2P24534 225 aaKnown RBP10.76□□□□□ -0.69
TSC2-220ENST00000568238 PMELP40967 661 aa10.76□□□□□ -0.69
TSC2-220ENST00000568238 PITPNBP48739 271 aa10.76□□□□□ -0.69
TSC2-220ENST00000568238 UBA52P62987 128 aaKnown RBP10.76□□□□□ -0.69
TSC2-220ENST00000568238 SLC35A2P78381 396 aa10.76□□□□□ -0.69
TSC2-220ENST00000568238 KLF17Q5JT82 389 aaPredicted RBP10.76□□□□□ -0.69
TSC2-220ENST00000568238 RBM48Q5RL73 367 aaKnown RBP10.76□□□□□ -0.69
TSC2-220ENST00000568238 FAM201AQ5SY85 155 aa10.76□□□□□ -0.69
TSC2-220ENST00000568238 PRAMEF6Q5VXH4 476 aa10.76□□□□□ -0.69
TSC2-220ENST00000568238 BTNL3Q6UXE8 466 aa10.76□□□□□ -0.69
TSC2-220ENST00000568238 DOK3Q7L591 496 aa10.76□□□□□ -0.69
TSC2-220ENST00000568238 SIGLECL1Q8N7X8 197 aa10.76□□□□□ -0.69
TSC2-220ENST00000568238 OR52N1Q8NH53 320 aa10.76□□□□□ -0.69
TSC2-220ENST00000568238 GATAD2BQ8WXI9 593 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms