RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 DPP10Q8N608 796 aa10.89□□□□□ -0.67
SMG1-213ENST00000567737 OR11H6Q8NGC7 330 aa10.89□□□□□ -0.67
SMG1-213ENST00000567737 NDNFQ8TB73 568 aa10.89□□□□□ -0.67
SMG1-213ENST00000567737 BCAS4Q8TDM0 211 aa10.89□□□□□ -0.67
SMG1-213ENST00000567737 LZICQ8WZA0 190 aa10.89□□□□□ -0.67
SMG1-213ENST00000567737 RAX2Q96IS3 184 aa10.89□□□□□ -0.67
SMG1-213ENST00000567737 TM2D3Q9BRN9 247 aa10.89□□□□□ -0.67
SMG1-213ENST00000567737 RTL8AQ9BWD3 113 aa10.89□□□□□ -0.67
SMG1-213ENST00000567737 CYB5R1Q9UHQ9 305 aa10.89□□□□□ -0.67
SMG1-213ENST00000567737 A4GNTQ9UNA3 340 aa10.89□□□□□ -0.67
SMG1-213ENST00000567737 N6AMT1Q9Y5N5 214 aa10.89□□□□□ -0.67
SMG1-213ENST00000567737 LYVE1Q9Y5Y7 322 aa10.89□□□□□ -0.67
SMG1-213ENST00000567737 DCTN6O00399 190 aa10.88□□□□□ -0.67
SMG1-213ENST00000567737 PSG2P11465 335 aa10.88□□□□□ -0.67
SMG1-213ENST00000567737 MYF6P23409 242 aa10.88□□□□□ -0.67
SMG1-213ENST00000567737 MTPNP58546 118 aa10.88□□□□□ -0.67
SMG1-213ENST00000567737 IL18R1Q13478 541 aa10.88□□□□□ -0.67
SMG1-213ENST00000567737 NFYCQ13952 458 aa10.88□□□□□ -0.67
SMG1-213ENST00000567737 ZNF273Q14593 569 aa10.88□□□□□ -0.67
SMG1-213ENST00000567737 ZNF260Q3ZCT1 412 aa10.88□□□□□ -0.67
SMG1-213ENST00000567737 MINOS1Q5TGZ0 78 aa10.88□□□□□ -0.67
SMG1-213ENST00000567737 AGBL2Q5U5Z8 902 aa10.88□□□□□ -0.67
SMG1-213ENST00000567737 PTCHD4Q6ZW05 846 aa10.88□□□□□ -0.67
SMG1-213ENST00000567737 CALHM1Q8IU99 346 aa10.88□□□□□ -0.67
SMG1-213ENST00000567737 EIF1ADQ8N9N8 165 aaKnown RBP10.88□□□□□ -0.67
SMG1-213ENST00000567737 OR4M1Q8NGD0 313 aa10.88□□□□□ -0.67
SMG1-213ENST00000567737 OR2T27Q8NH04 317 aa10.88□□□□□ -0.67
SMG1-213ENST00000567737 STMN2Q93045 179 aa10.88□□□□□ -0.67
SMG1-213ENST00000567737 SDSLQ96GA7 329 aa10.88□□□□□ -0.67
SMG1-213ENST00000567737 PRRC1Q96M27 445 aa10.88□□□□□ -0.67
SMG1-213ENST00000567737 C16orf45Q96MC5 204 aaPredicted RBP10.88□□□□□ -0.67
SMG1-213ENST00000567737 CDRT15Q96T59 188 aa10.88□□□□□ -0.67
SMG1-213ENST00000567737 PAPOLGQ9BWT3 736 aaKnown RBP10.88□□□□□ -0.67
SMG1-213ENST00000567737 ROPN1BQ9BZX4 212 aaPredicted RBP10.88□□□□□ -0.67
SMG1-213ENST00000567737 C1orf21Q9H246 121 aa10.88□□□□□ -0.67
SMG1-213ENST00000567737 ROPN1Q9HAT0 212 aaPredicted RBP10.88□□□□□ -0.67
SMG1-213ENST00000567737 SRA1Q9HD15 236 aaKnown RBP10.88□□□□□ -0.67
SMG1-213ENST00000567737 THAP1Q9NVV9 213 aa10.88□□□□□ -0.67
SMG1-213ENST00000567737 B9D1Q9UPM9 204 aa10.88□□□□□ -0.67
SMG1-213ENST00000567737 MINOS1-NBL1R4GNA1 71 aa10.88□□□□□ -0.67
SMG1-213ENST00000567737 TMEM210A6NLX4 147 aa10.87□□□□□ -0.67
SMG1-213ENST00000567737 C17orf98A8MV24 154 aa10.87□□□□□ -0.67
SMG1-213ENST00000567737 CDC42EP2O14613 210 aa10.87□□□□□ -0.67
SMG1-213ENST00000567737 PTP4A3O75365 173 aa10.87□□□□□ -0.67
SMG1-213ENST00000567737 OR2F2O95006 317 aa10.87□□□□□ -0.67
SMG1-213ENST00000567737 NDUFB2O95178 105 aa10.87□□□□□ -0.67
SMG1-213ENST00000567737 HLA-DQA2P01906 255 aa10.87□□□□□ -0.67
SMG1-213ENST00000567737 IGHV1-8P0DP01 117 aa10.87□□□□□ -0.67
SMG1-213ENST00000567737 TROVE2P10155 538 aaKnown RBP eCLIP10.87□□□□□ -0.67
SMG1-213ENST00000567737 SLC2A1P11166 492 aa10.87□□□□□ -0.67
SMG1-213ENST00000567737 CDKN2AP42771 156 aaKnown RBP10.87□□□□□ -0.67
SMG1-213ENST00000567737 GPR4P46093 362 aa10.87□□□□□ -0.67
SMG1-213ENST00000567737 MRPL19P49406 292 aaKnown RBP10.87□□□□□ -0.67
SMG1-213ENST00000567737 DLEU7Q6UYE1 221 aa10.87□□□□□ -0.67
SMG1-213ENST00000567737 KCTD8Q6ZWB6 473 aa10.87□□□□□ -0.67
SMG1-213ENST00000567737 SLC16A9Q7RTY1 509 aa10.87□□□□□ -0.67
SMG1-213ENST00000567737 OR4C15Q8NGM1 316 aa10.87□□□□□ -0.67
SMG1-213ENST00000567737 OR4Q3Q8NH05 313 aa10.87□□□□□ -0.67
SMG1-213ENST00000567737 OR8U1Q8NH10 309 aa10.87□□□□□ -0.67
SMG1-213ENST00000567737 SPSB4Q96A44 273 aa10.87□□□□□ -0.67
SMG1-213ENST00000567737 RBM14Q96PK6 669 aaKnown RBP10.87□□□□□ -0.67
SMG1-213ENST00000567737 PAIP2Q9BPZ3 127 aaKnown RBP10.87□□□□□ -0.67
SMG1-213ENST00000567737 NSRP1Q9H0G5 558 aaKnown RBP10.87□□□□□ -0.67
SMG1-213ENST00000567737 PPP1R3EQ9H7J1 279 aa10.87□□□□□ -0.67
SMG1-213ENST00000567737 YY1AP1Q9H869 796 aa10.87□□□□□ -0.67
SMG1-213ENST00000567737 NRIP3Q9NQ35 241 aa10.87□□□□□ -0.67
SMG1-213ENST00000567737 ZNF222Q9UK12 451 aa10.87□□□□□ -0.67
SMG1-213ENST00000567737 IER3IP1Q9Y5U9 82 aa10.87□□□□□ -0.67
SMG1-213ENST00000567737 TMEM238LA0A1B0GVL6 79 aa10.86□□□□□ -0.67
SMG1-213ENST00000567737 M0QZK8 103 aa10.86□□□□□ -0.67
SMG1-213ENST00000567737 LDLRAD4O15165 306 aa10.86□□□□□ -0.67
SMG1-213ENST00000567737 TBX1O43435 398 aa10.86□□□□□ -0.67
SMG1-213ENST00000567737 SLC25A17O43808 307 aa10.86□□□□□ -0.67
SMG1-213ENST00000567737 CD24P25063 80 aa10.86□□□□□ -0.67
SMG1-213ENST00000567737 OTX1P32242 354 aaPredicted RBP10.86□□□□□ -0.67
SMG1-213ENST00000567737 BRS3P32247 399 aa10.86□□□□□ -0.67
SMG1-213ENST00000567737 RPS6KA3P51812 740 aa10.86□□□□□ -0.67
SMG1-213ENST00000567737 PRKXP51817 358 aa10.86□□□□□ -0.67
SMG1-213ENST00000567737 FAM3AP98173 230 aa10.86□□□□□ -0.67
SMG1-213ENST00000567737 FAM27D1Q5T7N8 215 aa10.86□□□□□ -0.67
SMG1-213ENST00000567737 ZNF730Q6ZMV8 503 aa10.86□□□□□ -0.67
SMG1-213ENST00000567737 THAP5Q7Z6K1 395 aa10.86□□□□□ -0.67
SMG1-213ENST00000567737 SATL1Q86VE3 508 aa10.86□□□□□ -0.67
SMG1-213ENST00000567737 RNF113BQ8IZP6 322 aaKnown RBP10.86□□□□□ -0.67
SMG1-213ENST00000567737 COMMD1Q8N668 190 aa10.86□□□□□ -0.67
SMG1-213ENST00000567737 IL17DQ8TAD2 202 aa10.86□□□□□ -0.67
SMG1-213ENST00000567737 CHPT1Q8WUD6 406 aa10.86□□□□□ -0.67
SMG1-213ENST00000567737 FRAS1Q86XX4 4008 aa10.86□□□□□ -0.67
SMG1-213ENST00000567737 PLECQ15149 4684 aaKnown RBP10.85□□□□□ -0.67
SMG1-213ENST00000567737 SLC1A7O00341 560 aa10.85□□□□□ -0.67
SMG1-213ENST00000567737 AMY1AP04745 511 aa10.85□□□□□ -0.67
SMG1-213ENST00000567737 AMY2AP04746 511 aa10.85□□□□□ -0.67
SMG1-213ENST00000567737 HCKP08631 526 aa10.85□□□□□ -0.67
SMG1-213ENST00000567737 INSL3P51460 131 aa10.85□□□□□ -0.67
SMG1-213ENST00000567737 ARHGDIBP52566 201 aa10.85□□□□□ -0.67
SMG1-213ENST00000567737 SLC35B1P78383 322 aa10.85□□□□□ -0.67
SMG1-213ENST00000567737 TRAM2Q15035 370 aa10.85□□□□□ -0.67
SMG1-213ENST00000567737 SNCBQ16143 134 aa10.85□□□□□ -0.67
SMG1-213ENST00000567737 TIGD6Q17RP2 521 aa10.85□□□□□ -0.67
SMG1-213ENST00000567737 VMACQ2NL98 169 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms