RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	CNN2	Q99439	309 aa	Known RBP	5.74	□□□□□ -1.49
SF3B3-209	ENST00000567635	MNT	Q99583	582 aa		5.74	□□□□□ -1.49
SF3B3-209	ENST00000567635	CCL13	Q99616	98 aa		5.74	□□□□□ -1.49
SF3B3-209	ENST00000567635	PKP2	Q99959	881 aa		5.74	□□□□□ -1.49
SF3B3-209	ENST00000567635	APOL4	Q9BPW4	351 aa		5.74	□□□□□ -1.49
SF3B3-209	ENST00000567635	PBOV1	Q9GZY1	135 aa		5.74	□□□□□ -1.49
SF3B3-209	ENST00000567635	GABARAPL1	Q9H0R8	117 aa		5.74	□□□□□ -1.49
SF3B3-209	ENST00000567635	TLNRD1	Q9H1K6	362 aa		5.74	□□□□□ -1.49
SF3B3-209	ENST00000567635	CNTD2	Q9H8S5	307 aa		5.74	□□□□□ -1.49
SF3B3-209	ENST00000567635	FAM206A	Q9NX38	181 aa		5.74	□□□□□ -1.49
SF3B3-209	ENST00000567635	HAO2	Q9NYQ3	351 aa		5.74	□□□□□ -1.49
SF3B3-209	ENST00000567635	IKZF2	Q9UKS7	526 aa		5.74	□□□□□ -1.49
SF3B3-209	ENST00000567635	ZNF816-ZNF321P	A0A0X1KG74	233 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	MAGEA13P	A6NCF6	341 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	SLC22A31	A6NKX4	558 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	SRRM5	B3KS81	715 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	ZNF670-ZNF695	F2Z2N8	137 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635		M0R129	80 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	P2RY10	O00398	339 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	TMPRSS2	O15393	492 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	NDUFB3	O43676	98 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	MTRF1	O75570	445 aa	Known RBP	5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	TOX4	O94842	621 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	EGR1	P18146	543 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	CFP	P27918	469 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	TGM4	P49221	684 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	GPM6A	P51674	278 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	CXCR4	P61073	352 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	EGR3	Q06889	387 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	RIPPLY1	Q0D2K3	151 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	PDCD1	Q15116	288 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	CEACAM21	Q3KPI0	293 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	WDR38	Q5JTN6	314 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	ATPAF1	Q5TC12	328 aa	Predicted RBP	5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	OGFRL1	Q5TC84	451 aa	Predicted RBP	5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	GPR157	Q5UAW9	335 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	METTL11B	Q5VVY1	283 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	ZNF322	Q6U7Q0	402 aa	Predicted RBP	5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	MOB3C	Q70IA8	216 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	SLC36A1	Q7Z2H8	476 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	THAP5	Q7Z6K1	395 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	COMMD2	Q86X83	199 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	GID4	Q8IVV7	300 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	SLC35F2	Q8IXU6	374 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	ZDHHC23	Q8IYP9	409 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	OR5T2	Q8NGG2	359 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	OR5A2	Q8NGI9	324 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	OR10Z1	Q8NGY1	313 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	ZNF671	Q8TAW3	534 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	OR51E1	Q8TCB6	317 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	ST8SIA4	Q92187	359 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	RPL3L	Q92901	407 aa	Known RBP	5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	PPP1R14A	Q96A00	147 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	SLC25A28	Q96A46	364 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	C12orf43	Q96C57	262 aa	Known RBP	5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	SEH1L	Q96EE3	360 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	MED30	Q96HR3	178 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	ZNF48	Q96MX3	618 aa	Predicted RBP	5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	WDFY2	Q96P53	400 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	CIB1	Q99828	191 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	PCGF1	Q9BSM1	259 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	OSBPL10	Q9BXB5	764 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	DNTTIP1	Q9H147	329 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	SEMA6A	Q9H2E6	1030 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	OR51I2	Q9H344	312 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	ZMAT3	Q9HA38	289 aa	Known RBP	5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	ADGRL4	Q9HBW9	690 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	SMURF1	Q9HCE7	757 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	GPR84	Q9NQS5	396 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	CLN6	Q9NWW5	311 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	DNAJB11	Q9UBS4	358 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	WARS2	Q9UGM6	360 aa	Known RBP	5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	NUFIP1	Q9UHK0	495 aa	Known RBP	5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	COPS3	Q9UNS2	423 aa		5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	SOX21	Q9Y651	276 aa	Predicted RBP	5.73	□□□□□ -1.49
SF3B3-209	ENST00000567635	WNK1	Q9H4A3	2382 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	TRAV40	A0A0B4J280	105 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	CENPVL3	A0A0U1RRI6	287 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	DNAJC9-AS1	A6NH13	148 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	PRR32	B1ATL7	298 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	ZNF732	B4DXR9	585 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	LOC110117498-PIK3R3	F6TDL0	507 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635		H0YJX3	145 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	CLDN34	H7C241	214 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	MAGEB4	O15481	346 aa	Predicted RBP	5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	AKR7A2	O43488	359 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	SRSF10	O75494	262 aa	Known RBP	5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	FCN3	O75636	299 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	NRAS	P01111	189 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	TTR	P02766	147 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	SFTPB	P07988	381 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	OR2T7	P0C7T2	308 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	HKR1	P10072	659 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	MMP9	P14780	707 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	ATP6V1E1	P36543	226 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	POLR2I	P36954	125 aa	Known RBP	5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	GMFB	P60983	142 aa		5.72	□□□□□ -1.49
SF3B3-209	ENST00000567635	ARF6	P62330	175 aa		5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms