RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 NPTNQ9Y639 398 aa10.28□□□□□ -0.76
SF3B3-208ENST00000567250 LOC100289279A0A1B0GTE1 492 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 hCG_1807616A0A1W2PRN6 198 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 ISPDA4D126 451 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 LRP5LA4QPB2 252 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 H3BSH0 61 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 OGG1O15527 345 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 GRPP07492 148 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 GPM6AP51674 278 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 BTG1P62324 171 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 ZNF154Q13106 437 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 IRF3Q14653 427 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 SPHARQ15513 63 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 SPRNQ5BIV9 151 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 DMKNQ6E0U4 476 aaPredicted RBP10.27□□□□□ -0.77
SF3B3-208ENST00000567250 XAF1Q6GPH4 301 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 UTS2BQ765I0 119 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 RDH10Q8IZV5 341 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 SPICQ8N5J4 248 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 ZNF420Q8TAQ5 688 aaPredicted RBP10.27□□□□□ -0.77
SF3B3-208ENST00000567250 HPSE2Q8WWQ2 592 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 CPNE2Q96FN4 548 aaPredicted RBP10.27□□□□□ -0.77
SF3B3-208ENST00000567250 GPR173Q9NS66 373 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 UFSP2Q9NUQ7 469 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 C1orf123Q9NWV4 160 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 UBAP1Q9NZ09 502 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 TREM2Q9NZC2 230 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 RNF7Q9UBF6 113 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 ZNF281Q9Y2X9 895 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 WIPI2Q9Y4P8 454 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 CACNG2Q9Y698 323 aa10.27□□□□□ -0.77
SF3B3-208ENST00000567250 IGHV3-64DA0A0J9YX35 117 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 TMEM178BH3BS89 294 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 SMAD7O15105 426 aaKnown RBP10.26□□□□□ -0.77
SF3B3-208ENST00000567250 PLPP2O43688 288 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 FSTL3O95633 263 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 LALBAP00709 142 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 CD1AP06126 327 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 CELP19835 753 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 PRKACBP22694 351 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 MAPK3P27361 379 aaPredicted RBP10.26□□□□□ -0.77
SF3B3-208ENST00000567250 MDH2P40926 338 aaKnown RBP10.26□□□□□ -0.77
SF3B3-208ENST00000567250 KCNJ8Q15842 424 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 AVPI1Q5T686 147 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 ZNF367Q7RTV3 350 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 ZNF573Q86YE8 665 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 SERPINA12Q8IW75 414 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 OR51A4Q8NGJ6 313 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 UFD1Q92890 307 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 SPSB1Q96BD6 273 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 RAB39BQ96DA2 213 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 BORCS8Q96FH0 119 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 GAL3ST1Q99999 423 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 TLNRD1Q9H1K6 362 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 ISYNA1Q9NPH2 558 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 LRCH1Q9Y2L9 728 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 POLDIP2Q9Y2S7 368 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 VPS13CQ709C8 3753 aa10.26□□□□□ -0.77
SF3B3-208ENST00000567250 HIVEP1P15822 2718 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 PPIAL4EA0A075B759 164 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 IGHV4-61A0A0C4DH41 118 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 PNMA8CA0A1B0GUJ8 204 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 ZNF732B4DXR9 585 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 PPIAL4DF5H284 164 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 CYB5R3P00387 301 aaPredicted RBP10.25□□□□□ -0.77
SF3B3-208ENST00000567250 IGHV2-70P01814 119 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 INHBBP09529 407 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 PPIAL4FP0DN26 164 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 THBS2P35442 1172 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 FUT6P51993 359 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 MLLT11Q13015 90 aaPredicted RBP10.25□□□□□ -0.77
SF3B3-208ENST00000567250 MPPED2Q15777 294 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 Q499Y3 187 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 KCTD21Q4G0X4 260 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 TMEM155Q4W5P6 130 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 FAM76BQ5HYJ3 339 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 LHFPL2Q6ZUX7 228 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 WDR86Q86TI4 376 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 BIVMQ86UB2 503 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 PARP16Q8N5Y8 322 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 ZFP41Q8N8Y5 198 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 DNAAF1Q8NEP3 725 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 OR5D14Q8NGL3 314 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 OR10Z1Q8NGY1 313 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 OR10AC1Q8NH08 325 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 SGCDQ92629 289 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 FCGR1BQ92637 280 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 GHSRQ92847 366 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 TMEM106AQ96A25 262 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 FGGYQ96C11 551 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 ADAT3Q96EY9 351 aaPredicted RBP10.25□□□□□ -0.77
SF3B3-208ENST00000567250 PGLYRP3Q96LB9 341 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 CKLFQ9UBR5 152 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 LSM2Q9Y333 95 aaKnown RBP10.25□□□□□ -0.77
SF3B3-208ENST00000567250 PPIAL4AQ9Y536 164 aa10.25□□□□□ -0.77
SF3B3-208ENST00000567250 A0A096LNT2 108 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 PQLC2LA1A4F0 135 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 A6NIN4 97 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 J3QT63 122 aa10.24□□□□□ -0.77
SF3B3-208ENST00000567250 CDIPTO14735 213 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms