RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 PEG10Q86TG7 708 aaKnown RBP12.51□□□□□ -0.41
CDH1-209ENST00000566510 NAXEQ8NCW5 288 aa12.51□□□□□ -0.41
CDH1-209ENST00000566510 OR2M3Q8NG83 312 aa12.51□□□□□ -0.41
CDH1-209ENST00000566510 AQP10Q96PS8 301 aa12.51□□□□□ -0.41
CDH1-209ENST00000566510 RBM24Q9BX46 236 aaKnown RBP12.51□□□□□ -0.41
CDH1-209ENST00000566510 SLC5A7Q9GZV3 580 aa12.51□□□□□ -0.41
CDH1-209ENST00000566510 PARP12Q9H0J9 701 aaKnown RBP12.51□□□□□ -0.41
CDH1-209ENST00000566510 ANAPC10Q9UM13 185 aa12.51□□□□□ -0.41
CDH1-209ENST00000566510 OSGIN2Q9Y236 505 aa12.51□□□□□ -0.41
CDH1-209ENST00000566510 PIGLQ9Y2B2 252 aa12.51□□□□□ -0.41
CDH1-209ENST00000566510 MEMO1Q9Y316 297 aa12.51□□□□□ -0.41
CDH1-209ENST00000566510 BCAT2O15382 392 aaPredicted RBP12.51□□□□□ -0.41
CDH1-209ENST00000566510 IFNA2P01563 188 aa12.51□□□□□ -0.41
CDH1-209ENST00000566510 MUC1P15941 1255 aaPredicted RBP12.51□□□□□ -0.41
CDH1-209ENST00000566510 AFF3P51826 1226 aaKnown RBP12.51□□□□□ -0.41
CDH1-209ENST00000566510 MST1LQ2TV78 715 aa12.51□□□□□ -0.41
CDH1-209ENST00000566510 OR2A2Q6IF42 318 aa12.51□□□□□ -0.41
CDH1-209ENST00000566510 RAB11FIP2Q7L804 512 aa12.51□□□□□ -0.41
CDH1-209ENST00000566510 LHFPL1Q86WI0 220 aa12.51□□□□□ -0.41
CDH1-209ENST00000566510 ZNF2Q9BSG1 426 aaPredicted RBP12.51□□□□□ -0.41
CDH1-209ENST00000566510 HDHD3Q9BSH5 251 aaPredicted RBP12.51□□□□□ -0.41
CDH1-209ENST00000566510 CEACAM18A8MTB9 384 aa12.5□□□□□ -0.41
CDH1-209ENST00000566510 SLC25A53Q5H9E4 307 aa12.5□□□□□ -0.41
CDH1-209ENST00000566510 IL34Q6ZMJ4 242 aa12.5□□□□□ -0.41
CDH1-209ENST00000566510 SULF2Q8IWU5 870 aa12.5□□□□□ -0.41
CDH1-209ENST00000566510 ZFP82Q8N141 532 aa12.5□□□□□ -0.41
CDH1-209ENST00000566510 WDSUB1Q8N9V3 476 aa12.5□□□□□ -0.41
CDH1-209ENST00000566510 POC1AQ8NBT0 407 aa12.5□□□□□ -0.41
CDH1-209ENST00000566510 SEMA6DQ8NFY4 1073 aa12.5□□□□□ -0.41
CDH1-209ENST00000566510 SLC22A8Q8TCC7 542 aa12.5□□□□□ -0.41
CDH1-209ENST00000566510 C2CD4CQ8TF44 421 aa12.5□□□□□ -0.41
CDH1-209ENST00000566510 EMG1Q92979 244 aaKnown RBP12.5□□□□□ -0.41
CDH1-209ENST00000566510 ZNF775Q96BV0 537 aaPredicted RBP12.5□□□□□ -0.41
CDH1-209ENST00000566510 RASL10BQ96S79 203 aa12.5□□□□□ -0.41
CDH1-209ENST00000566510 LSM5Q9Y4Y9 91 aaKnown RBP12.5□□□□□ -0.41
CDH1-209ENST00000566510 IGLV3-12A0A075B6K2 115 aa12.5□□□□□ -0.41
CDH1-209ENST00000566510 IGKV1D-8A0A087WSZ0 117 aa12.5□□□□□ -0.41
CDH1-209ENST00000566510 ZNF205O95201 554 aa12.5□□□□□ -0.41
CDH1-209ENST00000566510 DBHP09172 617 aa12.5□□□□□ -0.41
CDH1-209ENST00000566510 LPAR6P43657 344 aa12.5□□□□□ -0.41
CDH1-209ENST00000566510 ID4P47928 161 aa12.5□□□□□ -0.41
CDH1-209ENST00000566510 CSNK1A1P48729 337 aa12.5□□□□□ -0.41
CDH1-209ENST00000566510 PRSS12P56730 875 aa12.5□□□□□ -0.41
CDH1-209ENST00000566510 PDZK1IP1Q13113 114 aa12.5□□□□□ -0.41
CDH1-209ENST00000566510 EIF5AL1Q6IS14 154 aaKnown RBP12.5□□□□□ -0.41
CDH1-209ENST00000566510 ADAMTS17Q8TE56 1095 aa12.5□□□□□ -0.41
CDH1-209ENST00000566510 JSRP1Q96MG2 331 aaPredicted RBP12.5□□□□□ -0.41
CDH1-209ENST00000566510 SEC11CQ9BY50 192 aa12.5□□□□□ -0.41
CDH1-209ENST00000566510 AKIRIN1Q9H9L7 192 aaPredicted RBP12.5□□□□□ -0.41
CDH1-209ENST00000566510 SEMA5BQ9P283 1151 aa12.5□□□□□ -0.41
CDH1-209ENST00000566510 CARHSP1Q9Y2V2 147 aaKnown RBP12.5□□□□□ -0.41
CDH1-209ENST00000566510 PI4KAP42356 2102 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 NUDT19A8MXV4 375 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 K7EPK0 472 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 ETV2O00321 342 aaPredicted RBP12.49□□□□□ -0.41
CDH1-209ENST00000566510 TMEM225BP0DP42 221 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 CCL1P22362 96 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 PTGER4P35408 488 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 CLEC9AQ6UXN8 241 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 FAM89BQ8N5H3 189 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 FAM71E2Q8N5Q1 922 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 GJC3Q8NFK1 279 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 SPACA9Q96E40 222 aaPredicted RBP12.49□□□□□ -0.41
CDH1-209ENST00000566510 C1orf123Q9NWV4 160 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 RARRES3Q9UL19 164 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 MCTS1Q9ULC4 181 aaKnown RBP12.49□□□□□ -0.41
CDH1-209ENST00000566510 AQP7P3A6NL99 342 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 FIGNL2A6NMB9 653 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 G3V3Y1 287 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 SFTA3P0C7M3 94 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 RPS2P15880 293 aaKnown RBP12.49□□□□□ -0.41
CDH1-209ENST00000566510 MSR1P21757 451 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 RPL12P30050 165 aaKnown RBP12.49□□□□□ -0.41
CDH1-209ENST00000566510 CD80P33681 288 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 SMCO1Q147U7 214 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 FAM76BQ5HYJ3 339 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 PHYHD1Q5SRE7 291 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 DHRS7BQ6IAN0 325 aaPredicted RBP12.49□□□□□ -0.41
CDH1-209ENST00000566510 DTX1Q86Y01 620 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 SGPP2Q8IWX5 399 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 FNDC9Q8TBE3 224 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 TOMM40LQ969M1 308 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 NRIP2Q9BQI9 281 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 ZNF576Q9H609 170 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 PLEK2Q9NYT0 353 aa12.49□□□□□ -0.41
CDH1-209ENST00000566510 FREM2Q5SZK8 3169 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 PMS2P1A4D2B8 440 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 DHRS7CA6NNS2 312 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 SERPINE3A8MV23 424 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 RNASEK-C17orf49H0YIS7 233 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 DHRS3O75911 302 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 HKR1P10072 659 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 CPT2P23786 658 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 RAB13P51153 203 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 CAV2P51636 162 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 RRADP55042 308 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 EIF5AP63241 154 aaKnown RBP12.48□□□□□ -0.41
CDH1-209ENST00000566510 SLC35A1P78382 337 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 RBM39Q14498 530 aaKnown RBP12.48□□□□□ -0.41
CDH1-209ENST00000566510 STK11Q15831 433 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms